RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 ZNF507Q8TCN5 953 aa8.65□□□□□ -1.02
SH3D19-213ENST00000604922 GAL3ST3Q96A11 431 aa8.65□□□□□ -1.02
SH3D19-213ENST00000604922 MIR1-1HGQ9H1L0 117 aa8.65□□□□□ -1.02
SH3D19-213ENST00000604922 PRAMEF27A3QJZ7 478 aa8.64□□□□□ -1.03
SH3D19-213ENST00000604922 PTPN11Q06124 597 aaPredicted RBP8.64□□□□□ -1.03
SH3D19-213ENST00000604922 RING1Q06587 406 aa8.64□□□□□ -1.03
SH3D19-213ENST00000604922 INPP5AQ14642 412 aa8.64□□□□□ -1.03
SH3D19-213ENST00000604922 LRFN4Q6PJG9 635 aa8.64□□□□□ -1.03
SH3D19-213ENST00000604922 PLPPR2Q96GM1 343 aa8.64□□□□□ -1.03
SH3D19-213ENST00000604922 PCDHB5Q9Y5E4 795 aa8.64□□□□□ -1.03
SH3D19-213ENST00000604922 WNT11O96014 354 aa8.63□□□□□ -1.03
SH3D19-213ENST00000604922 ANGEL1Q9UNK9 670 aaKnown RBP8.63□□□□□ -1.03
SH3D19-213ENST00000604922 SEPT6Q14141 434 aa8.62□□□□□ -1.03
SH3D19-213ENST00000604922 MSMPQ1L6U9 139 aa8.62□□□□□ -1.03
SH3D19-213ENST00000604922 WIPI1Q5MNZ9 446 aaPredicted RBP8.62□□□□□ -1.03
SH3D19-213ENST00000604922 ARHGAP27Q6ZUM4 889 aa8.62□□□□□ -1.03
SH3D19-213ENST00000604922 CYFIP1Q7L576 1253 aa8.62□□□□□ -1.03
SH3D19-213ENST00000604922 RELL1Q8IUW5 271 aa8.62□□□□□ -1.03
SH3D19-213ENST00000604922 DUSP23Q9BVJ7 150 aa8.62□□□□□ -1.03
SH3D19-213ENST00000604922 BSDC1Q9NW68 430 aaPredicted RBP8.62□□□□□ -1.03
SH3D19-213ENST00000604922 NTF4P34130 210 aa8.61□□□□□ -1.03
SH3D19-213ENST00000604922 MFAP1P55081 439 aaKnown RBP8.61□□□□□ -1.03
SH3D19-213ENST00000604922 ETF1P62495 437 aaKnown RBP8.61□□□□□ -1.03
SH3D19-213ENST00000604922 PWP1Q13610 501 aa8.61□□□□□ -1.03
SH3D19-213ENST00000604922 TSNAXIP1Q2TAA8 658 aa8.61□□□□□ -1.03
SH3D19-213ENST00000604922 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.61□□□□□ -1.03
SH3D19-213ENST00000604922 TOP6BLQ8N6T0 577 aa8.61□□□□□ -1.03
SH3D19-213ENST00000604922 WNT10AQ9GZT5 417 aa8.61□□□□□ -1.03
SH3D19-213ENST00000604922 TFE3P19532 575 aaPredicted RBP8.6□□□□□ -1.03
SH3D19-213ENST00000604922 PHC3Q8NDX5 983 aa8.6□□□□□ -1.03
SH3D19-213ENST00000604922 JARID2Q92833 1246 aaPredicted RBP8.6□□□□□ -1.03
SH3D19-213ENST00000604922 ZC3H7BQ9UGR2 993 aaKnown RBP8.6□□□□□ -1.03
SH3D19-213ENST00000604922 TLR6Q9Y2C9 796 aa8.6□□□□□ -1.03
SH3D19-213ENST00000604922 LEFTY1O75610 366 aa8.59□□□□□ -1.03
SH3D19-213ENST00000604922 GP2P55259 537 aaKnown RBP8.59□□□□□ -1.03
SH3D19-213ENST00000604922 CCDC84Q86UT8 332 aaPredicted RBP8.59□□□□□ -1.03
SH3D19-213ENST00000604922 VSIG10LQ86VR7 867 aa8.59□□□□□ -1.03
SH3D19-213ENST00000604922 RSRP1Q9BUV0 290 aa8.59□□□□□ -1.03
SH3D19-213ENST00000604922 PRDM10Q9NQV6 1147 aa8.59□□□□□ -1.03
SH3D19-213ENST00000604922 TACC3Q9Y6A5 838 aa8.59□□□□□ -1.03
SH3D19-213ENST00000604922 LRIG2O94898 1065 aa8.58□□□□□ -1.04
SH3D19-213ENST00000604922 PRNPP04156 253 aa8.58□□□□□ -1.04
SH3D19-213ENST00000604922 GBP2P32456 591 aaPredicted RBP8.58□□□□□ -1.04
SH3D19-213ENST00000604922 RPL6Q02878 288 aaKnown RBP8.58□□□□□ -1.04
SH3D19-213ENST00000604922 HID1Q8IV36 788 aa8.58□□□□□ -1.04
SH3D19-213ENST00000604922 CCDC39Q9UFE4 941 aa8.58□□□□□ -1.04
SH3D19-213ENST00000604922 GTF2IRD1Q9UHL9 959 aa8.58□□□□□ -1.04
SH3D19-213ENST00000604922 BPNT1O95861 308 aa8.57□□□□□ -1.04
SH3D19-213ENST00000604922 CDK8P49336 464 aa8.57□□□□□ -1.04
SH3D19-213ENST00000604922 LMNB2Q03252 620 aa8.57□□□□□ -1.04
SH3D19-213ENST00000604922 PDE4BQ07343 736 aa8.57□□□□□ -1.04
SH3D19-213ENST00000604922 CAMK2GQ13555 558 aaPredicted RBP8.57□□□□□ -1.04
SH3D19-213ENST00000604922 ARMCX6Q7L4S7 300 aa8.57□□□□□ -1.04
SH3D19-213ENST00000604922 FBXL18Q96ME1 805 aa8.57□□□□□ -1.04
SH3D19-213ENST00000604922 TMEM74Q96NL1 305 aa8.57□□□□□ -1.04
SH3D19-213ENST00000604922 FOXQ1Q9C009 403 aa8.57□□□□□ -1.04
SH3D19-213ENST00000604922 MKNK2Q9HBH9 465 aa8.57□□□□□ -1.04
SH3D19-213ENST00000604922 GFRA2O00451 464 aa8.56□□□□□ -1.04
SH3D19-213ENST00000604922 GRK4P32298 578 aa8.56□□□□□ -1.04
SH3D19-213ENST00000604922 UBE3DQ7Z6J8 389 aa8.56□□□□□ -1.04
SH3D19-213ENST00000604922 STK11IPQ8N1F8 1099 aa8.56□□□□□ -1.04
SH3D19-213ENST00000604922 MFSD2AQ8NA29 543 aa8.56□□□□□ -1.04
SH3D19-213ENST00000604922 NETO1Q8TDF5 533 aa8.56□□□□□ -1.04
SH3D19-213ENST00000604922 F6X3S4 739 aa8.55□□□□□ -1.04
SH3D19-213ENST00000604922 ADAMTS4O75173 837 aa8.55□□□□□ -1.04
SH3D19-213ENST00000604922 PF4P02776 101 aa8.55□□□□□ -1.04
SH3D19-213ENST00000604922 ZNF16P17020 682 aaPredicted RBP8.55□□□□□ -1.04
SH3D19-213ENST00000604922 CAP2P40123 477 aa8.55□□□□□ -1.04
SH3D19-213ENST00000604922 FAM181AQ8N9Y4 354 aa8.55□□□□□ -1.04
SH3D19-213ENST00000604922 MISP3Q96FF7 219 aa8.55□□□□□ -1.04
SH3D19-213ENST00000604922 NISCHQ9Y2I1 1504 aa8.54□□□□□ -1.04
SH3D19-213ENST00000604922 MINDY4BA8MYZ0 360 aa8.54□□□□□ -1.04
SH3D19-213ENST00000604922 PGRP06401 933 aa8.54□□□□□ -1.04
SH3D19-213ENST00000604922 MRPL58Q14197 206 aaKnown RBP8.54□□□□□ -1.04
SH3D19-213ENST00000604922 SLBPQ14493 270 aaKnown RBP eCLIP8.54□□□□□ -1.04
SH3D19-213ENST00000604922 TP53INP2Q8IXH6 220 aa8.54□□□□□ -1.04
SH3D19-213ENST00000604922 FLCNQ8NFG4 579 aa8.54□□□□□ -1.04
SH3D19-213ENST00000604922 FBRSQ9HAH7 460 aa8.54□□□□□ -1.04
SH3D19-213ENST00000604922 SLC5A6Q9Y289 635 aa8.54□□□□□ -1.04
SH3D19-213ENST00000604922 OAS3Q9Y6K5 1087 aaKnown RBP8.54□□□□□ -1.04
SH3D19-213ENST00000604922 IGF2BP3O00425 579 aaKnown RBP eCLIP8.53□□□□□ -1.04
SH3D19-213ENST00000604922 CEACAM5P06731 702 aa8.53□□□□□ -1.04
SH3D19-213ENST00000604922 IRAK1P51617 712 aa8.53□□□□□ -1.04
SH3D19-213ENST00000604922 IFI16Q16666 785 aaKnown RBP8.53□□□□□ -1.04
SH3D19-213ENST00000604922 SNAP47Q5SQN1 464 aa8.53□□□□□ -1.04
SH3D19-213ENST00000604922 PLD6Q8N2A8 252 aaKnown RBP8.53□□□□□ -1.04
SH3D19-213ENST00000604922 GATAD2BQ8WXI9 593 aa8.53□□□□□ -1.04
SH3D19-213ENST00000604922 TMEM265A0A087WTH1 108 aa8.52□□□□□ -1.05
SH3D19-213ENST00000604922 GNAT3A8MTJ3 354 aa8.52□□□□□ -1.05
SH3D19-213ENST00000604922 OXCT1P55809 520 aa8.52□□□□□ -1.05
SH3D19-213ENST00000604922 NKG7Q16617 165 aa8.52□□□□□ -1.05
SH3D19-213ENST00000604922 BNC2Q6ZN30 1099 aaPredicted RBP8.52□□□□□ -1.05
SH3D19-213ENST00000604922 HS2ST1Q7LGA3 356 aa8.52□□□□□ -1.05
SH3D19-213ENST00000604922 AGBL5Q8NDL9 886 aa8.52□□□□□ -1.05
SH3D19-213ENST00000604922 RHOVQ96L33 236 aa8.52□□□□□ -1.05
SH3D19-213ENST00000604922 HEXIM2Q96MH2 286 aaKnown RBP8.52□□□□□ -1.05
SH3D19-213ENST00000604922 MIPEPQ99797 713 aa8.52□□□□□ -1.05
SH3D19-213ENST00000604922 PRDM5Q9NQX1 630 aaPredicted RBP8.52□□□□□ -1.05
SH3D19-213ENST00000604922 TPX2Q9ULW0 747 aaKnown RBP8.52□□□□□ -1.05
SH3D19-213ENST00000604922 CILPO75339 1184 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms