RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 FLT1P17948 1338 aa22.06■■□□□ 1.12
CCDC12-208ENST00000603885 A0A0G2JLL6 359 aaPredicted RBP22.05■■□□□ 1.12
CCDC12-208ENST00000603885 TTF1Q15361 905 aaPredicted RBP22.05■■□□□ 1.12
CCDC12-208ENST00000603885 FASTKD5Q7L8L6 764 aaKnown RBP22.05■■□□□ 1.12
CCDC12-208ENST00000603885 PRRT2Q7Z6L0 340 aaPredicted RBP22.05■■□□□ 1.12
CCDC12-208ENST00000603885 BCL11AQ9H165 835 aa22.05■■□□□ 1.12
CCDC12-208ENST00000603885 PTPN22Q9Y2R2 807 aa22.05■■□□□ 1.12
CCDC12-208ENST00000603885 CDK5RAP2Q96SN8 1893 aa22.05■■□□□ 1.12
CCDC12-208ENST00000603885 FOCADQ5VW36 1801 aa22.04■■□□□ 1.12
CCDC12-208ENST00000603885 DYNLL1P63167 89 aaKnown RBP22.04■■□□□ 1.12
CCDC12-208ENST00000603885 KIF22Q14807 665 aa22.04■■□□□ 1.12
CCDC12-208ENST00000603885 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.04■■□□□ 1.12
CCDC12-208ENST00000603885 CAP1Q01518 475 aa22.03■■□□□ 1.12
CCDC12-208ENST00000603885 MIGA1Q8NAN2 632 aa22.03■■□□□ 1.12
CCDC12-208ENST00000603885 PARK7Q99497 189 aaKnown RBP22.03■■□□□ 1.12
CCDC12-208ENST00000603885 PHIPQ8WWQ0 1821 aa22.02■■□□□ 1.12
CCDC12-208ENST00000603885 TRIM75PA6NK02 468 aa22.02■■□□□ 1.12
CCDC12-208ENST00000603885 GPAT2Q6NUI2 795 aa22.02■■□□□ 1.12
CCDC12-208ENST00000603885 C17orf99Q6UX52 265 aa22.02■■□□□ 1.12
CCDC12-208ENST00000603885 GADL1Q6ZQY3 521 aa22.02■■□□□ 1.12
CCDC12-208ENST00000603885 TRIM34Q9BYJ4 488 aa22.02■■□□□ 1.12
CCDC12-208ENST00000603885 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.02■■□□□ 1.12
CCDC12-208ENST00000603885 HLA-DOAP06340 250 aa22.01■■□□□ 1.11
CCDC12-208ENST00000603885 CAP2P40123 477 aa22.01■■□□□ 1.11
CCDC12-208ENST00000603885 LACTBP83111 547 aaPredicted RBP22.01■■□□□ 1.11
CCDC12-208ENST00000603885 CCDC84Q86UT8 332 aaPredicted RBP22.01■■□□□ 1.11
CCDC12-208ENST00000603885 FOXP4Q8IVH2 680 aaPredicted RBP22.01■■□□□ 1.11
CCDC12-208ENST00000603885 CRACR2BQ8N4Y2 399 aaPredicted RBP22.01■■□□□ 1.11
CCDC12-208ENST00000603885 DNAJC2Q99543 621 aaKnown RBP22.01■■□□□ 1.11
CCDC12-208ENST00000603885 TBC1D2Q9BYX2 928 aa22.01■■□□□ 1.11
CCDC12-208ENST00000603885 CPA4Q9UI42 421 aa22.01■■□□□ 1.11
CCDC12-208ENST00000603885 PALD1Q9ULE6 856 aa22.01■■□□□ 1.11
CCDC12-208ENST00000603885 ADGRA2Q96PE1 1338 aa22.01■■□□□ 1.11
CCDC12-208ENST00000603885 SIPA1L1O43166 1804 aa22.01■■□□□ 1.11
CCDC12-208ENST00000603885 PTPRFP10586 1907 aa22■■□□□ 1.11
CCDC12-208ENST00000603885 USP5P45974 858 aa22■■□□□ 1.11
CCDC12-208ENST00000603885 LRRCC1Q9C099 1032 aa22■■□□□ 1.11
CCDC12-208ENST00000603885 SAP30BPQ9UHR5 308 aaKnown RBP22■■□□□ 1.11
CCDC12-208ENST00000603885 SLC45A1Q9Y2W3 748 aa22■■□□□ 1.11
CCDC12-208ENST00000603885 ATAD5Q96QE3 1844 aa22■■□□□ 1.11
CCDC12-208ENST00000603885 GOLIM4O00461 696 aa21.99■■□□□ 1.11
CCDC12-208ENST00000603885 RRP1BQ14684 758 aaKnown RBP21.99■■□□□ 1.11
CCDC12-208ENST00000603885 METTL16Q86W50 562 aaKnown RBP21.99■■□□□ 1.11
CCDC12-208ENST00000603885 ARHGAP39Q9C0H5 1083 aa21.99■■□□□ 1.11
CCDC12-208ENST00000603885 USP17L5A8MUK1 530 aa21.98■■□□□ 1.11
CCDC12-208ENST00000603885 GNRH1P01148 92 aa21.98■■□□□ 1.11
CCDC12-208ENST00000603885 CYP2C8P10632 490 aa21.98■■□□□ 1.11
CCDC12-208ENST00000603885 SLC9C2Q5TAH2 1124 aa21.98■■□□□ 1.11
CCDC12-208ENST00000603885 ZNF280CQ8ND82 737 aa21.98■■□□□ 1.11
CCDC12-208ENST00000603885 MAGEB6P1A0A0J9YX57 407 aa21.97■■□□□ 1.11
CCDC12-208ENST00000603885 ASNSP08243 561 aa21.97■■□□□ 1.11
CCDC12-208ENST00000603885 PDE6AP16499 860 aa21.97■■□□□ 1.11
CCDC12-208ENST00000603885 SPP2Q13103 211 aa21.97■■□□□ 1.11
CCDC12-208ENST00000603885 DNAJC18Q9H819 358 aa21.97■■□□□ 1.11
CCDC12-208ENST00000603885 AS3MTQ9HBK9 375 aa21.97■■□□□ 1.11
CCDC12-208ENST00000603885 AGTPBP1Q9UPW5 1226 aa21.97■■□□□ 1.11
CCDC12-208ENST00000603885 CENPFP49454 3210 aa21.97■■□□□ 1.11
CCDC12-208ENST00000603885 MYH1P12882 1939 aa21.96■■□□□ 1.11
CCDC12-208ENST00000603885 ATP5JP18859 108 aa21.96■■□□□ 1.11
CCDC12-208ENST00000603885 SLC4A8Q2Y0W8 1093 aa21.96■■□□□ 1.11
CCDC12-208ENST00000603885 PROCA1Q8NCQ7 364 aaPredicted RBP21.96■■□□□ 1.11
CCDC12-208ENST00000603885 ARMC5Q96C12 935 aa21.96■■□□□ 1.11
CCDC12-208ENST00000603885 RIOK1Q9BRS2 568 aaKnown RBP21.96■■□□□ 1.11
CCDC12-208ENST00000603885 BOLA2Q9H3K6 86 aa21.96■■□□□ 1.11
CCDC12-208ENST00000603885 PAG1Q9NWQ8 432 aa21.96■■□□□ 1.11
CCDC12-208ENST00000603885 PTCH2Q9Y6C5 1203 aa21.96■■□□□ 1.11
CCDC12-208ENST00000603885 ZSWIM8A7E2V4 1837 aa21.96■■□□□ 1.11
CCDC12-208ENST00000603885 BCRP11274 1271 aa21.95■■□□□ 1.1
CCDC12-208ENST00000603885 PRMT2P55345 433 aa21.95■■□□□ 1.1
CCDC12-208ENST00000603885 SLC9C1Q4G0N8 1177 aa21.95■■□□□ 1.1
CCDC12-208ENST00000603885 EDC3Q96F86 508 aaKnown RBP21.95■■□□□ 1.1
CCDC12-208ENST00000603885 GINM1Q9NU53 330 aa21.95■■□□□ 1.1
CCDC12-208ENST00000603885 ZNF532Q9HCE3 1301 aa21.95■■□□□ 1.1
CCDC12-208ENST00000603885 TNRC18O15417 2968 aaPredicted RBP21.95■■□□□ 1.1
CCDC12-208ENST00000603885 ECM2O94769 699 aaPredicted RBP21.94■■□□□ 1.1
CCDC12-208ENST00000603885 PSMC4P43686 418 aa21.94■■□□□ 1.1
CCDC12-208ENST00000603885 HMGCS2P54868 508 aa21.94■■□□□ 1.1
CCDC12-208ENST00000603885 TTC6Q86TZ1 520 aa21.94■■□□□ 1.1
CCDC12-208ENST00000603885 SMCR8Q8TEV9 937 aaPredicted RBP21.94■■□□□ 1.1
CCDC12-208ENST00000603885 HAUS7Q99871 368 aa21.94■■□□□ 1.1
CCDC12-208ENST00000603885 CRNKL1Q9BZJ0 848 aaKnown RBP21.94■■□□□ 1.1
CCDC12-208ENST00000603885 PNMA3Q9UL41 463 aa21.94■■□□□ 1.1
CCDC12-208ENST00000603885 LOC285556D6RIA3 1793 aa21.93■■□□□ 1.1
CCDC12-208ENST00000603885 SMARCA5O60264 1052 aaPredicted RBP21.93■■□□□ 1.1
CCDC12-208ENST00000603885 GDF11O95390 407 aa21.93■■□□□ 1.1
CCDC12-208ENST00000603885 FMNL1O95466 1100 aaPredicted RBP21.93■■□□□ 1.1
CCDC12-208ENST00000603885 HOXD10P28358 340 aa21.93■■□□□ 1.1
CCDC12-208ENST00000603885 RRP1P56182 461 aaKnown RBP21.93■■□□□ 1.1
CCDC12-208ENST00000603885 TREML2Q5T2D2 321 aa21.93■■□□□ 1.1
CCDC12-208ENST00000603885 NBPF11Q86T75 865 aa21.93■■□□□ 1.1
CCDC12-208ENST00000603885 TRIM47Q96LD4 638 aa21.93■■□□□ 1.1
CCDC12-208ENST00000603885 WDR18Q9BV38 432 aa21.93■■□□□ 1.1
CCDC12-208ENST00000603885 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.93■■□□□ 1.13e-10■■□□□ 12.7
CCDC12-208ENST00000603885 EHD4Q9H223 541 aa21.93■■□□□ 1.1
CCDC12-208ENST00000603885 DCTPP1Q9H773 170 aa21.93■■□□□ 1.1
CCDC12-208ENST00000603885 SERPINB13Q9UIV8 391 aa21.93■■□□□ 1.1
CCDC12-208ENST00000603885 TCRBV5S4A2TA0A5A2 114 aa21.92■■□□□ 1.1
CCDC12-208ENST00000603885 CTGFP29279 349 aa21.92■■□□□ 1.1
CCDC12-208ENST00000603885 PABPC4Q13310 644 aaKnown RBP eCLIP21.92■■□□□ 1.1
CCDC12-208ENST00000603885 SH3D19Q5HYK7 790 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms