RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 DHX36Q9H2U1 1008 aaKnown RBP27.65■■■□□ 2.02
SSBP4-209ENST00000601357 ANTXR1Q9H6X2 564 aa27.65■■■□□ 2.02
SSBP4-209ENST00000601357 FLT1P17948 1338 aa27.65■■■□□ 2.02
SSBP4-209ENST00000601357 IDH1O75874 414 aaKnown RBP27.64■■■□□ 2.02
SSBP4-209ENST00000601357 CLASRPQ8N2M8 674 aaKnown RBP27.64■■■□□ 2.02
SSBP4-209ENST00000601357 TGFBRAP1Q8WUH2 860 aa27.64■■■□□ 2.02
SSBP4-209ENST00000601357 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.64■■■□□ 2.02
SSBP4-209ENST00000601357 HERC5Q9UII4 1024 aaKnown RBP27.64■■■□□ 2.02
SSBP4-209ENST00000601357 BRCA2P51587 3418 aa27.64■■■□□ 2.01
SSBP4-209ENST00000601357 CYP7A1P22680 504 aa27.63■■■□□ 2.01
SSBP4-209ENST00000601357 ARHGEF6Q15052 776 aa27.63■■■□□ 2.01
SSBP4-209ENST00000601357 TMED8Q6PL24 325 aaPredicted RBP27.63■■■□□ 2.01
SSBP4-209ENST00000601357 PI4KBQ9UBF8 816 aa27.63■■■□□ 2.01
SSBP4-209ENST00000601357 RAB11FIP3O75154 756 aa27.62■■■□□ 2.01
SSBP4-209ENST00000601357 RRP1BQ14684 758 aaKnown RBP27.62■■■□□ 2.01
SSBP4-209ENST00000601357 FASTKD5Q7L8L6 764 aaKnown RBP27.62■■■□□ 2.01
SSBP4-209ENST00000601357 METTL16Q86W50 562 aaKnown RBP27.62■■■□□ 2.01
SSBP4-209ENST00000601357 MAPKAPK5Q8IW41 473 aa27.62■■■□□ 2.01
SSBP4-209ENST00000601357 ARHGAP39Q9C0H5 1083 aa27.62■■■□□ 2.01
SSBP4-209ENST00000601357 RBBP6Q7Z6E9 1792 aaKnown RBP27.62■■■□□ 2.01
SSBP4-209ENST00000601357 APBB1O00213 710 aa27.61■■■□□ 2.01
SSBP4-209ENST00000601357 CAP2P40123 477 aa27.61■■■□□ 2.01
SSBP4-209ENST00000601357 DYNLL1P63167 89 aaKnown RBP27.61■■■□□ 2.01
SSBP4-209ENST00000601357 ARMC5Q96C12 935 aa27.61■■■□□ 2.01
SSBP4-209ENST00000601357 CPA4Q9UI42 421 aa27.61■■■□□ 2.01
SSBP4-209ENST00000601357 MAP3K12Q12852 859 aa27.6■■■□□ 2.01
SSBP4-209ENST00000601357 CCDC84Q86UT8 332 aaPredicted RBP27.6■■■□□ 2.01
SSBP4-209ENST00000601357 CERS3Q8IU89 383 aa27.6■■■□□ 2.01
SSBP4-209ENST00000601357 MAGEB6Q8N7X4 407 aa27.6■■■□□ 2.01
SSBP4-209ENST00000601357 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.6■■■□□ 2.01
SSBP4-209ENST00000601357 PARK7Q99497 189 aaKnown RBP27.6■■■□□ 2.01
SSBP4-209ENST00000601357 DNAJC18Q9H819 358 aa27.6■■■□□ 2.01
SSBP4-209ENST00000601357 SLC45A1Q9Y2W3 748 aa27.6■■■□□ 2.01
SSBP4-209ENST00000601357 LOC285556D6RIA3 1793 aa27.6■■■□□ 2.01
SSBP4-209ENST00000601357 TRIM75PA6NK02 468 aa27.59■■■□□ 2.01
SSBP4-209ENST00000601357 KIF22Q14807 665 aa27.59■■■□□ 2.01
SSBP4-209ENST00000601357 GNRH1P01148 92 aa27.58■■■□□ 2.01
SSBP4-209ENST00000601357 IFIT2P09913 472 aaKnown RBP27.58■■■□□ 2.01
SSBP4-209ENST00000601357 CYP2C8P10632 490 aa27.58■■■□□ 2.01
SSBP4-209ENST00000601357 CTGFP29279 349 aa27.58■■■□□ 2.01
SSBP4-209ENST00000601357 MIGA1Q8NAN2 632 aa27.58■■■□□ 2.01
SSBP4-209ENST00000601357 TBC1D2Q9BYX2 928 aa27.58■■■□□ 2.01
SSBP4-209ENST00000601357 PALD1Q9ULE6 856 aa27.58■■■□□ 2.01
SSBP4-209ENST00000601357 MYH1P12882 1939 aa27.57■■■□□ 2
SSBP4-209ENST00000601357 BCRP11274 1271 aa27.57■■■□□ 2
SSBP4-209ENST00000601357 TTF1Q15361 905 aaPredicted RBP27.57■■■□□ 2
SSBP4-209ENST00000601357 GADL1Q6ZQY3 521 aa27.57■■■□□ 2
SSBP4-209ENST00000601357 FOXP4Q8IVH2 680 aaPredicted RBP27.57■■■□□ 2
SSBP4-209ENST00000601357 PTCH2Q9Y6C5 1203 aa27.57■■■□□ 2
SSBP4-209ENST00000601357 DDX60LQ5H9U9 1706 aaKnown RBP27.56■■■□□ 2
SSBP4-209ENST00000601357 ZNF280CQ8ND82 737 aa27.55■■■□□ 2
SSBP4-209ENST00000601357 TRIM47Q96LD4 638 aa27.55■■■□□ 2
SSBP4-209ENST00000601357 RIOK1Q9BRS2 568 aaKnown RBP27.55■■■□□ 2
SSBP4-209ENST00000601357 SAP30BPQ9UHR5 308 aaKnown RBP27.55■■■□□ 2
SSBP4-209ENST00000601357 AGTPBP1Q9UPW5 1226 aa27.55■■■□□ 2
SSBP4-209ENST00000601357 MKI67P46013 3256 aaKnown RBP27.55■■■□□ 2
SSBP4-209ENST00000601357 USP17L5A8MUK1 530 aa27.54■■■□□ 2
SSBP4-209ENST00000601357 MGAMO43451 1857 aa27.54■■■□□ 2
SSBP4-209ENST00000601357 JAG1P78504 1218 aa27.54■■■□□ 2
SSBP4-209ENST00000601357 SPP2Q13103 211 aa27.54■■■□□ 2
SSBP4-209ENST00000601357 PROCA1Q8NCQ7 364 aaPredicted RBP27.54■■■□□ 2
SSBP4-209ENST00000601357 PSMC4P43686 418 aa27.53■■■□□ 2
SSBP4-209ENST00000601357 PRMT2P55345 433 aa27.53■■■□□ 2
SSBP4-209ENST00000601357 ZNF333Q96JL9 665 aa27.53■■■□□ 2
SSBP4-209ENST00000601357 GOLIM4O00461 696 aa27.52■■■□□ 2
SSBP4-209ENST00000601357 PDE6AP16499 860 aa27.52■■■□□ 2
SSBP4-209ENST00000601357 SLC9C1Q4G0N8 1177 aa27.52■■■□□ 2
SSBP4-209ENST00000601357 TREML2Q5T2D2 321 aa27.52■■■□□ 2
SSBP4-209ENST00000601357 SLC9C2Q5TAH2 1124 aa27.52■■■□□ 2
SSBP4-209ENST00000601357 CRACR2BQ8N4Y2 399 aaPredicted RBP27.52■■■□□ 2
SSBP4-209ENST00000601357 TCRBV5S4A2TA0A5A2 114 aa27.51■■□□□ 1.99
SSBP4-209ENST00000601357 POTEFA5A3E0 1075 aa27.51■■□□□ 1.99
SSBP4-209ENST00000601357 HLA-DOAP06340 250 aa27.51■■□□□ 1.99
SSBP4-209ENST00000601357 ASNSP08243 561 aa27.51■■□□□ 1.99
SSBP4-209ENST00000601357 ATP5JP18859 108 aa27.51■■□□□ 1.99
SSBP4-209ENST00000601357 USP5P45974 858 aa27.51■■□□□ 1.99
SSBP4-209ENST00000601357 SH3D19Q5HYK7 790 aa27.51■■□□□ 1.99
SSBP4-209ENST00000601357 DNAJC2Q99543 621 aaKnown RBP27.51■■□□□ 1.99
SSBP4-209ENST00000601357 WDR18Q9BV38 432 aa27.51■■□□□ 1.99
SSBP4-209ENST00000601357 NBPF11Q86T75 865 aa27.5■■□□□ 1.99
SSBP4-209ENST00000601357 LRRCC1Q9C099 1032 aa27.5■■□□□ 1.99
SSBP4-209ENST00000601357 EHD4Q9H223 541 aa27.5■■□□□ 1.99
SSBP4-209ENST00000601357 AS3MTQ9HBK9 375 aa27.5■■□□□ 1.99
SSBP4-209ENST00000601357 GINM1Q9NU53 330 aa27.5■■□□□ 1.99
SSBP4-209ENST00000601357 SRRDQ9UH36 339 aa27.5■■□□□ 1.99
SSBP4-209ENST00000601357 NAV1Q8NEY1 1877 aa27.49■■□□□ 1.99
SSBP4-209ENST00000601357 OSBPP22059 807 aa27.49■■□□□ 1.99
SSBP4-209ENST00000601357 HMGCS2P54868 508 aa27.49■■□□□ 1.99
SSBP4-209ENST00000601357 SHROOM1Q2M3G4 852 aaPredicted RBP27.49■■□□□ 1.99
SSBP4-209ENST00000601357 SLC4A8Q2Y0W8 1093 aa27.49■■□□□ 1.99
SSBP4-209ENST00000601357 EDC3Q96F86 508 aaKnown RBP27.49■■□□□ 1.99
SSBP4-209ENST00000601357 TRIM34Q9BYJ4 488 aa27.49■■□□□ 1.99
SSBP4-209ENST00000601357 ZNF532Q9HCE3 1301 aa27.48■■□□□ 1.99
SSBP4-209ENST00000601357 MAGEB6P1A0A0J9YX57 407 aa27.48■■□□□ 1.99
SSBP4-209ENST00000601357 TATDN1Q6P1N9 297 aa27.48■■□□□ 1.99
SSBP4-209ENST00000601357 BCL11AQ9H165 835 aa27.48■■□□□ 1.99
SSBP4-209ENST00000601357 PAG1Q9NWQ8 432 aa27.48■■□□□ 1.99
SSBP4-209ENST00000601357 ZBTB21Q9ULJ3 1066 aa27.48■■□□□ 1.99
SSBP4-209ENST00000601357 ECM2O94769 699 aaPredicted RBP27.47■■□□□ 1.99
SSBP4-209ENST00000601357 FMNL1O95466 1100 aaPredicted RBP27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms