RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 EVX2Q03828 476 aa20.71■□□□□ 0.91
SHKBP1-224ENST00000600718 WTAPQ15007 396 aa20.71■□□□□ 0.91
SHKBP1-224ENST00000600718 ZNF287Q9HBT7 754 aa20.71■□□□□ 0.91
SHKBP1-224ENST00000600718 LTBP3Q9NS15 1303 aa20.7■□□□□ 0.91
SHKBP1-224ENST00000600718 CCDC69A6NI79 296 aa20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 PRDM1O75626 825 aa20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 WDHD1O75717 1129 aaPredicted RBP20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 RAD17O75943 681 aa20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 PDCP20941 246 aa20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 SYT1P21579 422 aa20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 IQCA1Q86XH1 822 aa20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 SMARCC2Q8TAQ2 1214 aa20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 HPS5Q9UPZ3 1129 aa20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 NFKBIEO00221 500 aa20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 PSMD14O00487 310 aa20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 PLCD1P51178 756 aa20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 RBM5P52756 815 aaKnown RBP eCLIP20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 APOA5Q6Q788 366 aa20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 SYNE3Q6ZMZ3 975 aa20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 JDP2Q8WYK2 163 aa20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 ZSCAN10Q96SZ4 725 aaPredicted RBP20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 ZKSCAN3Q9BRR0 538 aa20.7■□□□□ 0.9
SHKBP1-224ENST00000600718 NAV1Q8NEY1 1877 aa20.69■□□□□ 0.9
SHKBP1-224ENST00000600718 STX6O43752 255 aa20.69■□□□□ 0.9
SHKBP1-224ENST00000600718 HMGN5P82970 282 aaKnown RBP20.69■□□□□ 0.9
SHKBP1-224ENST00000600718 NSUN7Q8NE18 718 aaKnown RBP20.69■□□□□ 0.9
SHKBP1-224ENST00000600718 NLGN2Q8NFZ4 835 aa20.69■□□□□ 0.9
SHKBP1-224ENST00000600718 GMLQ99445 158 aa20.69■□□□□ 0.9
SHKBP1-224ENST00000600718 MKNK2Q9HBH9 465 aa20.69■□□□□ 0.9
SHKBP1-224ENST00000600718 SENP2Q9HC62 589 aa20.69■□□□□ 0.9
SHKBP1-224ENST00000600718 NCOA5Q9HCD5 579 aaKnown RBP20.69■□□□□ 0.9
SHKBP1-224ENST00000600718 SLC12A7Q9Y666 1083 aa20.69■□□□□ 0.9
SHKBP1-224ENST00000600718 COL4A5P29400 1685 aa20.69■□□□□ 0.9
SHKBP1-224ENST00000600718 FER1L6Q2WGJ9 1857 aa20.69■□□□□ 0.9
SHKBP1-224ENST00000600718 MCM4P33991 863 aa20.68■□□□□ 0.9
SHKBP1-224ENST00000600718 SEC23AQ15436 765 aa20.68■□□□□ 0.9
SHKBP1-224ENST00000600718 LARP1BQ659C4 914 aaKnown RBP20.68■□□□□ 0.9
SHKBP1-224ENST00000600718 TTC6Q86TZ1 520 aa20.68■□□□□ 0.9
SHKBP1-224ENST00000600718 DYNLL2Q96FJ2 89 aa20.68■□□□□ 0.9
SHKBP1-224ENST00000600718 PSME4Q14997 1843 aa20.68■□□□□ 0.9
SHKBP1-224ENST00000600718 ZBTB43O43298 467 aa20.68■□□□□ 0.9
SHKBP1-224ENST00000600718 JAK2O60674 1132 aa20.68■□□□□ 0.9
SHKBP1-224ENST00000600718 CTDNEP1O95476 244 aa20.68■□□□□ 0.9
SHKBP1-224ENST00000600718 SLC4A8Q2Y0W8 1093 aa20.68■□□□□ 0.9
SHKBP1-224ENST00000600718 HDAC9Q9UKV0 1011 aa20.68■□□□□ 0.9
SHKBP1-224ENST00000600718 KIF3AQ9Y496 699 aa20.68■□□□□ 0.9
SHKBP1-224ENST00000600718 CDK5RAP2Q96SN8 1893 aa20.68■□□□□ 0.9
SHKBP1-224ENST00000600718 TNKSO95271 1327 aa20.67■□□□□ 0.9
SHKBP1-224ENST00000600718 METAP2P50579 478 aaKnown RBP eCLIP20.67■□□□□ 0.9
SHKBP1-224ENST00000600718 PICALMQ13492 652 aa20.67■□□□□ 0.9
SHKBP1-224ENST00000600718 C16orf86Q6ZW13 317 aa20.67■□□□□ 0.9
SHKBP1-224ENST00000600718 AGBL3Q8NEM8 1001 aa20.67■□□□□ 0.9
SHKBP1-224ENST00000600718 DDX4Q9NQI0 724 aaKnown RBP20.67■□□□□ 0.9
SHKBP1-224ENST00000600718 TSPY2A6NKD2 308 aa20.66■□□□□ 0.9
SHKBP1-224ENST00000600718 NPM3O75607 178 aaKnown RBP20.66■□□□□ 0.9
SHKBP1-224ENST00000600718 RCAN1P53805 252 aa20.66■□□□□ 0.9
SHKBP1-224ENST00000600718 CXCL9Q07325 125 aa20.66■□□□□ 0.9
SHKBP1-224ENST00000600718 CFAP100Q494V2 611 aa20.66■□□□□ 0.9
SHKBP1-224ENST00000600718 ZNF444Q8N0Y2 327 aaPredicted RBP20.66■□□□□ 0.9
SHKBP1-224ENST00000600718 IDI2Q9BXS1 227 aa20.66■□□□□ 0.9
SHKBP1-224ENST00000600718 PTPDC1A2A3K4 754 aa20.66■□□□□ 0.9
SHKBP1-224ENST00000600718 DTNBO60941 627 aa20.66■□□□□ 0.9
SHKBP1-224ENST00000600718 ZSCAN22P10073 491 aaPredicted RBP20.66■□□□□ 0.9
SHKBP1-224ENST00000600718 CCDC178Q5BJE1 867 aa20.66■□□□□ 0.9
SHKBP1-224ENST00000600718 FAM184AQ8NB25 1140 aa20.66■□□□□ 0.9
SHKBP1-224ENST00000600718 OSBPL5Q9H0X9 879 aaPredicted RBP20.66■□□□□ 0.9
SHKBP1-224ENST00000600718 FOCADQ5VW36 1801 aa20.66■□□□□ 0.9
SHKBP1-224ENST00000600718 DDX60LQ5H9U9 1706 aaKnown RBP20.66■□□□□ 0.9
SHKBP1-224ENST00000600718 CPLX1O14810 134 aa20.65■□□□□ 0.9
SHKBP1-224ENST00000600718 BAG4O95429 457 aaKnown RBP20.65■□□□□ 0.9
SHKBP1-224ENST00000600718 CDK8P49336 464 aa20.65■□□□□ 0.9
SHKBP1-224ENST00000600718 TFAP4Q01664 338 aa20.65■□□□□ 0.9
SHKBP1-224ENST00000600718 TNIP1Q15025 636 aa20.65■□□□□ 0.9
SHKBP1-224ENST00000600718 FAM47AQ5JRC9 791 aa20.65■□□□□ 0.9
SHKBP1-224ENST00000600718 CIAPIN1Q6FI81 312 aa20.65■□□□□ 0.9
SHKBP1-224ENST00000600718 OGFOD1Q8N543 542 aa20.65■□□□□ 0.9
SHKBP1-224ENST00000600718 ENAHQ8N8S7 591 aaPredicted RBP20.65■□□□□ 0.9
SHKBP1-224ENST00000600718 PCDHAC2Q9Y5I4 1007 aa20.65■□□□□ 0.9
SHKBP1-224ENST00000600718 IFIT1BQ5T764 474 aaKnown RBP20.65■□□□□ 0.9
SHKBP1-224ENST00000600718 CPLX2Q6PUV4 134 aaKnown RBP20.65■□□□□ 0.9
SHKBP1-224ENST00000600718 DDX11Q96FC9 970 aa20.65■□□□□ 0.9
SHKBP1-224ENST00000600718 NID2Q14112 1375 aa20.64■□□□□ 0.89
SHKBP1-224ENST00000600718 ADAMTSL1Q8N6G6 1762 aa20.64■□□□□ 0.89
SHKBP1-224ENST00000600718 GOLGA8AA7E2F4 631 aa20.64■□□□□ 0.89
SHKBP1-224ENST00000600718 FOXD4L5Q5VV16 416 aaPredicted RBP20.64■□□□□ 0.89
SHKBP1-224ENST00000600718 MICU3Q86XE3 530 aa20.64■□□□□ 0.89
SHKBP1-224ENST00000600718 RAB11FIP4Q86YS3 637 aa20.64■□□□□ 0.89
SHKBP1-224ENST00000600718 FOXD4L4Q8WXT5 416 aaPredicted RBP20.64■□□□□ 0.89
SHKBP1-224ENST00000600718 TCP11L1Q9NUJ3 509 aa20.64■□□□□ 0.89
SHKBP1-224ENST00000600718 MTMR6Q9Y217 621 aa20.64■□□□□ 0.89
SHKBP1-224ENST00000600718 CDKL5O76039 1030 aa20.63■□□□□ 0.89
SHKBP1-224ENST00000600718 RASA1P20936 1047 aa20.63■□□□□ 0.89
SHKBP1-224ENST00000600718 MMP14P50281 582 aa20.63■□□□□ 0.89
SHKBP1-224ENST00000600718 ZNF654Q8IZM8 581 aa20.63■□□□□ 0.89
SHKBP1-224ENST00000600718 ZBTB12Q9Y330 459 aaPredicted RBP20.63■□□□□ 0.89
SHKBP1-224ENST00000600718 DDX11L8A8MPP1 907 aa20.63■□□□□ 0.89
SHKBP1-224ENST00000600718 HLA-DOAP06340 250 aa20.63■□□□□ 0.89
SHKBP1-224ENST00000600718 NFIAQ12857 509 aa20.63■□□□□ 0.89
SHKBP1-224ENST00000600718 PPP2R5BQ15173 497 aa20.63■□□□□ 0.89
SHKBP1-224ENST00000600718 SLC44A5Q8NCS7 719 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms