RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 SREBF2Q12772 1141 aa19.07■□□□□ 0.64
RPS28-203ENST00000600659 UBE3CQ15386 1083 aa19.07■□□□□ 0.64
RPS28-203ENST00000600659 LNPKQ9C0E8 428 aa19.07■□□□□ 0.64
RPS28-203ENST00000600659 DHX36Q9H2U1 1008 aaKnown RBP19.07■□□□□ 0.64
RPS28-203ENST00000600659 PALD1Q9ULE6 856 aa19.07■□□□□ 0.64
RPS28-203ENST00000600659 GLRX3O76003 335 aaKnown RBP19.06■□□□□ 0.64
RPS28-203ENST00000600659 PDE1AP54750 535 aa19.06■□□□□ 0.64
RPS28-203ENST00000600659 EVX2Q03828 476 aa19.06■□□□□ 0.64
RPS28-203ENST00000600659 PPIL2Q13356 520 aa19.06■□□□□ 0.64
RPS28-203ENST00000600659 IFNL1Q8IU54 200 aa19.06■□□□□ 0.64
RPS28-203ENST00000600659 SCYL3Q8IZE3 742 aa19.06■□□□□ 0.64
RPS28-203ENST00000600659 BRI3BPQ8WY22 251 aa19.06■□□□□ 0.64
RPS28-203ENST00000600659 CFHR5Q9BXR6 569 aa19.06■□□□□ 0.64
RPS28-203ENST00000600659 R3HDMLQ9H3Y0 253 aa19.06■□□□□ 0.64
RPS28-203ENST00000600659 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.06■□□□□ 0.64
RPS28-203ENST00000600659 SAP30BPQ9UHR5 308 aaKnown RBP19.06■□□□□ 0.64
RPS28-203ENST00000600659 MBD4O95243 580 aa19.05■□□□□ 0.64
RPS28-203ENST00000600659 PPATQ06203 517 aa19.05■□□□□ 0.64
RPS28-203ENST00000600659 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.05■□□□□ 0.644e-7■□□□□ 10.3
RPS28-203ENST00000600659 PUS7LQ9H0K6 701 aaKnown RBP19.05■□□□□ 0.64
RPS28-203ENST00000600659 ARMT1Q9H993 441 aa19.05■□□□□ 0.64
RPS28-203ENST00000600659 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.05■□□□□ 0.64
RPS28-203ENST00000600659 PI4KBQ9UBF8 816 aa19.05■□□□□ 0.64
RPS28-203ENST00000600659 KCNH4Q9UQ05 1017 aa19.05■□□□□ 0.64
RPS28-203ENST00000600659 MYH8P13535 1937 aa19.04■□□□□ 0.64
RPS28-203ENST00000600659 ERC2O15083 957 aa19.04■□□□□ 0.64
RPS28-203ENST00000600659 CTNND1O60716 968 aaKnown RBP19.04■□□□□ 0.64
RPS28-203ENST00000600659 PTPRAP18433 802 aa19.04■□□□□ 0.64
RPS28-203ENST00000600659 INHBEP58166 350 aa19.04■□□□□ 0.64
RPS28-203ENST00000600659 NUCB1Q02818 461 aa19.04■□□□□ 0.64
RPS28-203ENST00000600659 MOGSQ13724 837 aa19.04■□□□□ 0.64
RPS28-203ENST00000600659 B4GALNT3Q6L9W6 998 aa19.04■□□□□ 0.64
RPS28-203ENST00000600659 SDR42E1Q8WUS8 393 aa19.04■□□□□ 0.64
RPS28-203ENST00000600659 HERC5Q9UII4 1024 aaKnown RBP19.04■□□□□ 0.64
RPS28-203ENST00000600659 LOC285556D6RIA3 1793 aa19.04■□□□□ 0.64
RPS28-203ENST00000600659 PRKAB2O43741 272 aa19.03■□□□□ 0.64
RPS28-203ENST00000600659 USP5P45974 858 aa19.03■□□□□ 0.64
RPS28-203ENST00000600659 JAG1P78504 1218 aa19.03■□□□□ 0.64
RPS28-203ENST00000600659 SLC4A8Q2Y0W8 1093 aa19.03■□□□□ 0.64
RPS28-203ENST00000600659 CHD1LQ86WJ1 897 aa19.03■□□□□ 0.64
RPS28-203ENST00000600659 OSBP2Q969R2 916 aa19.03■□□□□ 0.64
RPS28-203ENST00000600659 DCP1AQ9NPI6 582 aaPredicted RBP19.03■□□□□ 0.64
RPS28-203ENST00000600659 TBC1D8O95759 1140 aa19.02■□□□□ 0.64
RPS28-203ENST00000600659 PLCD1P51178 756 aa19.02■□□□□ 0.64
RPS28-203ENST00000600659 GTF2A2P52657 109 aa19.02■□□□□ 0.64
RPS28-203ENST00000600659 SHROOM1Q2M3G4 852 aaPredicted RBP19.02■□□□□ 0.64
RPS28-203ENST00000600659 CCDC84Q86UT8 332 aaPredicted RBP19.02■□□□□ 0.64
RPS28-203ENST00000600659 CRNKL1Q9BZJ0 848 aaKnown RBP19.02■□□□□ 0.64
RPS28-203ENST00000600659 CCL15-CCL14A0A0B4J2E2 113 aa19.01■□□□□ 0.63
RPS28-203ENST00000600659 CAP2P40123 477 aa19.01■□□□□ 0.63
RPS28-203ENST00000600659 GABPAQ06546 454 aa19.01■□□□□ 0.63
RPS28-203ENST00000600659 CCL15Q16663 113 aa19.01■□□□□ 0.63
RPS28-203ENST00000600659 ZSCAN25Q6NSZ9 544 aa19.01■□□□□ 0.63
RPS28-203ENST00000600659 FOXP4Q8IVH2 680 aaPredicted RBP19.01■□□□□ 0.63
RPS28-203ENST00000600659 FAM43AQ8N2R8 423 aa19.01■□□□□ 0.63
RPS28-203ENST00000600659 APPBP2Q92624 585 aa19.01■□□□□ 0.63
RPS28-203ENST00000600659 EHD4Q9H223 541 aa19.01■□□□□ 0.63
RPS28-203ENST00000600659 AFG3L2Q9Y4W6 797 aa19.01■□□□□ 0.63
RPS28-203ENST00000600659 SMIM22K7EJ46 135 aa19■□□□□ 0.63
RPS28-203ENST00000600659 RNF113AO15541 343 aaKnown RBP19■□□□□ 0.63
RPS28-203ENST00000600659 SNAPC2Q13487 334 aa19■□□□□ 0.63
RPS28-203ENST00000600659 PLEKHM2Q8IWE5 1019 aa19■□□□□ 0.63
RPS28-203ENST00000600659 OSBPL3Q9H4L5 887 aa19■□□□□ 0.63
RPS28-203ENST00000600659 BTBD19C9JJ37 291 aa19■□□□□ 0.63
RPS28-203ENST00000600659 CYP2D6P10635 497 aa19■□□□□ 0.63
RPS28-203ENST00000600659 NOM1Q5C9Z4 860 aaKnown RBP19■□□□□ 0.63
RPS28-203ENST00000600659 TATDN1Q6P1N9 297 aa19■□□□□ 0.63
RPS28-203ENST00000600659 STRBPQ96SI9 672 aaKnown RBP19■□□□□ 0.63
RPS28-203ENST00000600659 M0R2C6 588 aa18.99■□□□□ 0.63
RPS28-203ENST00000600659 ALDH1A1P00352 501 aa18.99■□□□□ 0.63
RPS28-203ENST00000600659 HLA-DOAP06340 250 aa18.99■□□□□ 0.63
RPS28-203ENST00000600659 ZFYP08048 801 aaPredicted RBP18.99■□□□□ 0.63
RPS28-203ENST00000600659 PDE4AP27815 886 aa18.99■□□□□ 0.63
RPS28-203ENST00000600659 SHMT1P34896 483 aa18.99■□□□□ 0.63
RPS28-203ENST00000600659 CRHR2Q13324 411 aa18.99■□□□□ 0.63
RPS28-203ENST00000600659 SEC62Q99442 399 aaKnown RBP18.99■□□□□ 0.63
RPS28-203ENST00000600659 PICK1Q9NRD5 415 aa18.99■□□□□ 0.63
RPS28-203ENST00000600659 ATP8A2Q9NTI2 1148 aa18.99■□□□□ 0.63
RPS28-203ENST00000600659 MCM9Q9NXL9 1143 aa18.99■□□□□ 0.63
RPS28-203ENST00000600659 ZBTB47Q9UFB7 747 aaPredicted RBP18.99■□□□□ 0.63
RPS28-203ENST00000600659 ZHX2Q9Y6X8 837 aa18.99■□□□□ 0.63
RPS28-203ENST00000600659 ZSWIM8A7E2V4 1837 aa18.98■□□□□ 0.63
RPS28-203ENST00000600659 GREB1LQ9C091 1923 aaPredicted RBP18.98■□□□□ 0.63
RPS28-203ENST00000600659 A0A0G2JLL6 359 aaPredicted RBP18.98■□□□□ 0.63
RPS28-203ENST00000600659 CXCL11O14625 94 aa18.98■□□□□ 0.63
RPS28-203ENST00000600659 GDF11O95390 407 aa18.98■□□□□ 0.63
RPS28-203ENST00000600659 CETPP11597 493 aa18.98■□□□□ 0.63
RPS28-203ENST00000600659 ZMYM1Q5SVZ6 1142 aa18.98■□□□□ 0.63
RPS28-203ENST00000600659 PRRT2Q7Z6L0 340 aaPredicted RBP18.98■□□□□ 0.63
RPS28-203ENST00000600659 FSD1Q9BTV5 496 aa18.98■□□□□ 0.63
RPS28-203ENST00000600659 EPB41L4AQ9HCS5 686 aaPredicted RBP18.98■□□□□ 0.63
RPS28-203ENST00000600659 SERPINB13Q9UIV8 391 aa18.98■□□□□ 0.63
RPS28-203ENST00000600659 GPR25O00155 361 aa18.97■□□□□ 0.63
RPS28-203ENST00000600659 GPAA1O43292 621 aa18.97■□□□□ 0.63
RPS28-203ENST00000600659 GPAT2Q6NUI2 795 aa18.97■□□□□ 0.63
RPS28-203ENST00000600659 TTC6Q86TZ1 520 aa18.97■□□□□ 0.63
RPS28-203ENST00000600659 CRACR2BQ8N4Y2 399 aaPredicted RBP18.97■□□□□ 0.63
RPS28-203ENST00000600659 ZNF296Q8WUU4 475 aaPredicted RBP18.97■□□□□ 0.63
RPS28-203ENST00000600659 SLC4A4Q9Y6R1 1079 aa18.97■□□□□ 0.63
RPS28-203ENST00000600659 CYP2D7A0A087X1C5 515 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms