RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 APPP05067 770 aa23.15■■□□□ 1.3
UPF1-209ENST00000600310 PLCD1P51178 756 aa23.15■■□□□ 1.3
UPF1-209ENST00000600310 SLC4A8Q2Y0W8 1093 aa23.15■■□□□ 1.3
UPF1-209ENST00000600310 DEFB115Q30KQ5 88 aa23.15■■□□□ 1.3
UPF1-209ENST00000600310 ANKRD13AQ8IZ07 590 aa23.15■■□□□ 1.3
UPF1-209ENST00000600310 IFNL3Q8IZI9 196 aa23.15■■□□□ 1.3
UPF1-209ENST00000600310 RUFY2Q8WXA3 655 aa23.15■■□□□ 1.3
UPF1-209ENST00000600310 NACAP1Q9BZK3 213 aa23.15■■□□□ 1.3
UPF1-209ENST00000600310 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.15■■□□□ 1.3
UPF1-209ENST00000600310 AK9Q5TCS8 1911 aa23.15■■□□□ 1.3
UPF1-209ENST00000600310 RAD50Q92878 1312 aa23.14■■□□□ 1.3
UPF1-209ENST00000600310 PHF20L1A8MW92 1017 aa23.14■■□□□ 1.29
UPF1-209ENST00000600310 SBK1Q52WX2 424 aa23.14■■□□□ 1.29
UPF1-209ENST00000600310 C12orf60Q5U649 245 aa23.14■■□□□ 1.29
UPF1-209ENST00000600310 VPS53Q5VIR6 699 aa23.14■■□□□ 1.29
UPF1-209ENST00000600310 RGMBQ6NW40 437 aa23.14■■□□□ 1.29
UPF1-209ENST00000600310 CTR9Q6PD62 1173 aa23.14■■□□□ 1.29
UPF1-209ENST00000600310 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.14■■□□□ 1.29
UPF1-209ENST00000600310 AMOTL1Q8IY63 956 aa23.14■■□□□ 1.29
UPF1-209ENST00000600310 WRNIP1Q96S55 665 aa23.14■■□□□ 1.29
UPF1-209ENST00000600310 ARPP21Q9UBL0 812 aaPredicted RBP23.14■■□□□ 1.29
UPF1-209ENST00000600310 SERPINB13Q9UIV8 391 aa23.14■■□□□ 1.29
UPF1-209ENST00000600310 FAM196BA6NMK8 535 aa23.13■■□□□ 1.29
UPF1-209ENST00000600310 CYP2D6P10635 497 aa23.13■■□□□ 1.29
UPF1-209ENST00000600310 GABPAQ06546 454 aa23.13■■□□□ 1.29
UPF1-209ENST00000600310 CRACR2BQ8N4Y2 399 aaPredicted RBP23.13■■□□□ 1.29
UPF1-209ENST00000600310 DNAJC18Q9H819 358 aa23.13■■□□□ 1.29
UPF1-209ENST00000600310 TAOK2Q9UL54 1235 aa23.13■■□□□ 1.29
UPF1-209ENST00000600310 GTF3C3Q9Y5Q9 886 aa23.13■■□□□ 1.29
UPF1-209ENST00000600310 DDX60LQ5H9U9 1706 aaKnown RBP23.13■■□□□ 1.29
UPF1-209ENST00000600310 HSPD1P10809 573 aaKnown RBP23.12■■□□□ 1.29
UPF1-209ENST00000600310 INPP5BP32019 993 aa23.12■■□□□ 1.29
UPF1-209ENST00000600310 TDO2P48775 406 aa23.12■■□□□ 1.29
UPF1-209ENST00000600310 ALX1Q15699 326 aa23.12■■□□□ 1.29
UPF1-209ENST00000600310 TRIM34Q9BYJ4 488 aa23.12■■□□□ 1.29
UPF1-209ENST00000600310 NAPBQ9H115 298 aa23.12■■□□□ 1.29
UPF1-209ENST00000600310 IL25Q9H293 177 aa23.12■■□□□ 1.29
UPF1-209ENST00000600310 NAV1Q8NEY1 1877 aa23.11■■□□□ 1.29
UPF1-209ENST00000600310 CYP2D7A0A087X1C5 515 aa23.11■■□□□ 1.29
UPF1-209ENST00000600310 EVX2Q03828 476 aa23.11■■□□□ 1.29
UPF1-209ENST00000600310 VGLL4Q14135 290 aa23.11■■□□□ 1.29
UPF1-209ENST00000600310 CLMNQ96JQ2 1002 aa23.11■■□□□ 1.29
UPF1-209ENST00000600310 CSADQ9Y600 493 aa23.11■■□□□ 1.29
UPF1-209ENST00000600310 MYH1P12882 1939 aa23.11■■□□□ 1.29
UPF1-209ENST00000600310 SGSM2O43147 1006 aa23.1■■□□□ 1.29
UPF1-209ENST00000600310 ZNF157P51786 506 aaPredicted RBP23.1■■□□□ 1.29
UPF1-209ENST00000600310 NOL9Q5SY16 702 aaKnown RBP23.1■■□□□ 1.29
UPF1-209ENST00000600310 ZKSCAN4Q969J2 545 aaPredicted RBP23.1■■□□□ 1.29
UPF1-209ENST00000600310 CCDC102AQ96A19 550 aa23.1■■□□□ 1.29
UPF1-209ENST00000600310 SLC10A4Q96EP9 437 aa23.1■■□□□ 1.29
UPF1-209ENST00000600310 SMIM22K7EJ46 135 aa23.09■■□□□ 1.29
UPF1-209ENST00000600310 CTNND1O60716 968 aaKnown RBP23.09■■□□□ 1.29
UPF1-209ENST00000600310 CDC45O75419 566 aa23.09■■□□□ 1.29
UPF1-209ENST00000600310 ECE1P42892 770 aa23.09■■□□□ 1.29
UPF1-209ENST00000600310 CYP4F22Q6NT55 531 aa23.09■■□□□ 1.29
UPF1-209ENST00000600310 DSCC1Q9BVC3 393 aa23.09■■□□□ 1.29
UPF1-209ENST00000600310 SNCAIPQ9Y6H5 919 aa23.09■■□□□ 1.29
UPF1-209ENST00000600310 SIPA1L1O43166 1804 aa23.09■■□□□ 1.29
UPF1-209ENST00000600310 MINDY4BA8MYZ0 360 aa23.08■■□□□ 1.29
UPF1-209ENST00000600310 FGAP02671 866 aa23.08■■□□□ 1.29
UPF1-209ENST00000600310 CAP2P40123 477 aa23.08■■□□□ 1.29
UPF1-209ENST00000600310 RRP1BQ14684 758 aaKnown RBP23.08■■□□□ 1.29
UPF1-209ENST00000600310 TATDN1Q6P1N9 297 aa23.08■■□□□ 1.29
UPF1-209ENST00000600310 PAXIP1Q6ZW49 1069 aaPredicted RBP23.08■■□□□ 1.29
UPF1-209ENST00000600310 RASAL3Q86YV0 1011 aa23.08■■□□□ 1.29
UPF1-209ENST00000600310 CAPNS2Q96L46 248 aa23.08■■□□□ 1.29
UPF1-209ENST00000600310 SWAP70Q9UH65 585 aa23.08■■□□□ 1.29
UPF1-209ENST00000600310 ZMYM6O95789 1325 aa23.08■■□□□ 1.28
UPF1-209ENST00000600310 FAM155AB1AL88 458 aaPredicted RBP23.07■■□□□ 1.28
UPF1-209ENST00000600310 SLC10A3P09131 477 aa23.07■■□□□ 1.28
UPF1-209ENST00000600310 SHMT1P34896 483 aa23.07■■□□□ 1.28
UPF1-209ENST00000600310 SCYL3Q8IZE3 742 aa23.07■■□□□ 1.28
UPF1-209ENST00000600310 DYNLL2Q96FJ2 89 aa23.07■■□□□ 1.28
UPF1-209ENST00000600310 ESYT1Q9BSJ8 1104 aa23.07■■□□□ 1.28
UPF1-209ENST00000600310 ELP3Q9H9T3 547 aa23.07■■□□□ 1.28
UPF1-209ENST00000600310 BAZ2AQ9UIF9 1905 aaKnown RBP23.06■■□□□ 1.28
UPF1-209ENST00000600310 VEGFBP49765 207 aa23.06■■□□□ 1.28
UPF1-209ENST00000600310 CASC1Q6TDU7 716 aa23.06■■□□□ 1.28
UPF1-209ENST00000600310 C16orf86Q6ZW13 317 aa23.06■■□□□ 1.28
UPF1-209ENST00000600310 SLC44A5Q8NCS7 719 aa23.06■■□□□ 1.28
UPF1-209ENST00000600310 WDR33Q9C0J8 1336 aaKnown RBP23.06■■□□□ 1.28
UPF1-209ENST00000600310 ROBO3Q96MS0 1386 aa23.05■■□□□ 1.28
UPF1-209ENST00000600310 SPDYE5A6NIY4 337 aa23.05■■□□□ 1.28
UPF1-209ENST00000600310 CDK8P49336 464 aa23.05■■□□□ 1.28
UPF1-209ENST00000600310 PPARAQ07869 468 aa23.05■■□□□ 1.28
UPF1-209ENST00000600310 COL13A1Q5TAT6 717 aaPredicted RBP23.05■■□□□ 1.28
UPF1-209ENST00000600310 SPRYD7Q5W111 196 aa23.05■■□□□ 1.28
UPF1-209ENST00000600310 ERO1BQ86YB8 467 aa23.05■■□□□ 1.28
UPF1-209ENST00000600310 PICK1Q9NRD5 415 aa23.05■■□□□ 1.28
UPF1-209ENST00000600310 GINM1Q9NU53 330 aa23.05■■□□□ 1.28
UPF1-209ENST00000600310 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.05■■□□□ 1.28
UPF1-209ENST00000600310 CERKLQ49MI3 558 aaPredicted RBP23.04■■□□□ 1.28
UPF1-209ENST00000600310 OPTNQ96CV9 577 aa23.04■■□□□ 1.28
UPF1-209ENST00000600310 WNK4Q96J92 1243 aa23.04■■□□□ 1.28
UPF1-209ENST00000600310 ANAPC4Q9UJX5 808 aa23.04■■□□□ 1.28
UPF1-209ENST00000600310 OTOFQ9HC10 1997 aa23.03■■□□□ 1.28
UPF1-209ENST00000600310 SLC3A2P08195 630 aaKnown RBP23.03■■□□□ 1.28
UPF1-209ENST00000600310 ZBTB48P10074 688 aaPredicted RBP23.03■■□□□ 1.28
UPF1-209ENST00000600310 NOGQ13253 232 aa23.03■■□□□ 1.28
UPF1-209ENST00000600310 GRM1Q13255 1194 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms