RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 CPA4Q9UI42 421 aa19.28■□□□□ 0.68
VRK3-221ENST00000600284 RAB11FIP3O75154 756 aa19.27■□□□□ 0.68
VRK3-221ENST00000600284 IDH1O75874 414 aaKnown RBP19.27■□□□□ 0.68
VRK3-221ENST00000600284 CYP7A1P22680 504 aa19.27■□□□□ 0.68
VRK3-221ENST00000600284 CAP2P40123 477 aa19.27■□□□□ 0.68
VRK3-221ENST00000600284 MAP3K12Q12852 859 aa19.27■□□□□ 0.68
VRK3-221ENST00000600284 METTL16Q86W50 562 aaKnown RBP19.27■□□□□ 0.68
VRK3-221ENST00000600284 PTCH2Q9Y6C5 1203 aa19.27■□□□□ 0.68
VRK3-221ENST00000600284 MAST2Q6P0Q8 1798 aa19.27■□□□□ 0.67
VRK3-221ENST00000600284 FAM196BA6NMK8 535 aa19.26■□□□□ 0.67
VRK3-221ENST00000600284 HOXD10P28358 340 aa19.26■□□□□ 0.67
VRK3-221ENST00000600284 TTF1Q15361 905 aaPredicted RBP19.26■□□□□ 0.67
VRK3-221ENST00000600284 GADL1Q6ZQY3 521 aa19.26■□□□□ 0.67
VRK3-221ENST00000600284 MAPKAPK5Q8IW41 473 aa19.26■□□□□ 0.67
VRK3-221ENST00000600284 SIRT2Q8IXJ6 389 aa19.26■□□□□ 0.67
VRK3-221ENST00000600284 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.26■□□□□ 0.67
VRK3-221ENST00000600284 ARHGAP39Q9C0H5 1083 aa19.26■□□□□ 0.67
VRK3-221ENST00000600284 IL1RAPL2Q9NP60 686 aa19.26■□□□□ 0.67
VRK3-221ENST00000600284 DOCK1Q14185 1865 aa19.26■□□□□ 0.67
VRK3-221ENST00000600284 FLT1P17948 1338 aa19.25■□□□□ 0.67
VRK3-221ENST00000600284 TRIM75PA6NK02 468 aa19.25■□□□□ 0.67
VRK3-221ENST00000600284 USP17L5A8MUK1 530 aa19.25■□□□□ 0.67
VRK3-221ENST00000600284 BCRP11274 1271 aa19.25■□□□□ 0.67
VRK3-221ENST00000600284 PSMC4P43686 418 aa19.25■□□□□ 0.67
VRK3-221ENST00000600284 SLC9C1Q4G0N8 1177 aa19.25■□□□□ 0.67
VRK3-221ENST00000600284 PROCA1Q8NCQ7 364 aaPredicted RBP19.25■□□□□ 0.67
VRK3-221ENST00000600284 ZNF280CQ8ND82 737 aa19.25■□□□□ 0.67
VRK3-221ENST00000600284 ZNF333Q96JL9 665 aa19.25■□□□□ 0.67
VRK3-221ENST00000600284 GINM1Q9NU53 330 aa19.25■□□□□ 0.67
VRK3-221ENST00000600284 HTTP42858 3142 aa19.25■□□□□ 0.67
VRK3-221ENST00000600284 CYP2C8P10632 490 aa19.24■□□□□ 0.67
VRK3-221ENST00000600284 MAGEB6Q8N7X4 407 aa19.24■□□□□ 0.67
VRK3-221ENST00000600284 ANTXR1Q9H6X2 564 aa19.24■□□□□ 0.67
VRK3-221ENST00000600284 AS3MTQ9HBK9 375 aa19.24■□□□□ 0.67
VRK3-221ENST00000600284 AGTPBP1Q9UPW5 1226 aa19.24■□□□□ 0.67
VRK3-221ENST00000600284 HLA-DOAP06340 250 aa19.23■□□□□ 0.67
VRK3-221ENST00000600284 IFIT2P09913 472 aaKnown RBP19.23■□□□□ 0.67
VRK3-221ENST00000600284 DYNLL1P63167 89 aaKnown RBP19.23■□□□□ 0.67
VRK3-221ENST00000600284 SPP2Q13103 211 aa19.23■□□□□ 0.67
VRK3-221ENST00000600284 TRIM47Q96LD4 638 aa19.23■□□□□ 0.67
VRK3-221ENST00000600284 TMEM106CQ9BVX2 250 aa19.23■□□□□ 0.67
VRK3-221ENST00000600284 TRIM34Q9BYJ4 488 aa19.23■□□□□ 0.67
VRK3-221ENST00000600284 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.23■□□□□ 0.67
VRK3-221ENST00000600284 SRRDQ9UH36 339 aa19.23■□□□□ 0.67
VRK3-221ENST00000600284 PALD1Q9ULE6 856 aa19.23■□□□□ 0.67
VRK3-221ENST00000600284 POTEFA5A3E0 1075 aa19.22■□□□□ 0.67
VRK3-221ENST00000600284 FMNL1O95466 1100 aaPredicted RBP19.22■□□□□ 0.67
VRK3-221ENST00000600284 ASNSP08243 561 aa19.22■□□□□ 0.67
VRK3-221ENST00000600284 CTGFP29279 349 aa19.22■□□□□ 0.67
VRK3-221ENST00000600284 RRP1BQ14684 758 aaKnown RBP19.22■□□□□ 0.67
VRK3-221ENST00000600284 SH3D19Q5HYK7 790 aa19.22■□□□□ 0.67
VRK3-221ENST00000600284 CCDC84Q86UT8 332 aaPredicted RBP19.22■□□□□ 0.67
VRK3-221ENST00000600284 CRACR2BQ8N4Y2 399 aaPredicted RBP19.22■□□□□ 0.67
VRK3-221ENST00000600284 WDR18Q9BV38 432 aa19.22■□□□□ 0.67
VRK3-221ENST00000600284 PNMA3Q9UL41 463 aa19.22■□□□□ 0.67
VRK3-221ENST00000600284 NDUFB9Q9Y6M9 179 aa19.22■□□□□ 0.67
VRK3-221ENST00000600284 PHIPQ8WWQ0 1821 aa19.22■□□□□ 0.67
VRK3-221ENST00000600284 TNRC18O15417 2968 aaPredicted RBP19.21■□□□□ 0.67
VRK3-221ENST00000600284 OSBPP22059 807 aa19.21■□□□□ 0.67
VRK3-221ENST00000600284 FCGRTP55899 365 aa19.21■□□□□ 0.67
VRK3-221ENST00000600284 PABPC4Q13310 644 aaKnown RBP eCLIP19.21■□□□□ 0.67
VRK3-221ENST00000600284 MIGA1Q8NAN2 632 aa19.21■□□□□ 0.67
VRK3-221ENST00000600284 DNAJC18Q9H819 358 aa19.21■□□□□ 0.67
VRK3-221ENST00000600284 MYO5AQ9Y4I1 1855 aaKnown RBP19.21■□□□□ 0.67
VRK3-221ENST00000600284 APBB1O00213 710 aa19.2■□□□□ 0.66
VRK3-221ENST00000600284 USP5P45974 858 aa19.2■□□□□ 0.66
VRK3-221ENST00000600284 SMCR8Q8TEV9 937 aaPredicted RBP19.2■□□□□ 0.66
VRK3-221ENST00000600284 PTPRFP10586 1907 aa19.19■□□□□ 0.66
VRK3-221ENST00000600284 FOCADQ5VW36 1801 aa19.19■□□□□ 0.66
VRK3-221ENST00000600284 C19orf81C9J6K1 198 aa19.19■□□□□ 0.66
VRK3-221ENST00000600284 TREML2Q5T2D2 321 aa19.19■□□□□ 0.66
VRK3-221ENST00000600284 C20orf194Q5TEA3 1177 aa19.19■□□□□ 0.66
VRK3-221ENST00000600284 RAET1EQ8TD07 263 aa19.19■□□□□ 0.66
VRK3-221ENST00000600284 RIOK1Q9BRS2 568 aaKnown RBP19.19■□□□□ 0.66
VRK3-221ENST00000600284 EHD4Q9H223 541 aa19.19■□□□□ 0.66
VRK3-221ENST00000600284 SAP30BPQ9UHR5 308 aaKnown RBP19.19■□□□□ 0.66
VRK3-221ENST00000600284 HMGCS2P54868 508 aa19.18■□□□□ 0.66
VRK3-221ENST00000600284 BACE1P56817 501 aa19.18■□□□□ 0.66
VRK3-221ENST00000600284 SLC9C2Q5TAH2 1124 aa19.18■□□□□ 0.66
VRK3-221ENST00000600284 TTC6Q86TZ1 520 aa19.18■□□□□ 0.66
VRK3-221ENST00000600284 RBBP6Q7Z6E9 1792 aaKnown RBP19.18■□□□□ 0.66
VRK3-221ENST00000600284 MYPNQ86TC9 1320 aa19.18■□□□□ 0.66
VRK3-221ENST00000600284 CDK5RAP2Q96SN8 1893 aa19.18■□□□□ 0.66
VRK3-221ENST00000600284 SIPA1L1O43166 1804 aa19.17■□□□□ 0.66
VRK3-221ENST00000600284 PDE6AP16499 860 aa19.17■□□□□ 0.66
VRK3-221ENST00000600284 ATP5JP18859 108 aa19.17■□□□□ 0.66
VRK3-221ENST00000600284 GRK4P32298 578 aa19.17■□□□□ 0.66
VRK3-221ENST00000600284 GCLCP48506 637 aaPredicted RBP19.17■□□□□ 0.66
VRK3-221ENST00000600284 SLC4A8Q2Y0W8 1093 aa19.17■□□□□ 0.66
VRK3-221ENST00000600284 PRPF38BQ5VTL8 546 aaKnown RBP19.17■□□□□ 0.66
VRK3-221ENST00000600284 TATDN1Q6P1N9 297 aa19.17■□□□□ 0.66
VRK3-221ENST00000600284 SH3TC2Q8TF17 1288 aa19.17■□□□□ 0.66
VRK3-221ENST00000600284 DNAJC2Q99543 621 aaKnown RBP19.17■□□□□ 0.66
VRK3-221ENST00000600284 SERPINB13Q9UIV8 391 aa19.17■□□□□ 0.66
VRK3-221ENST00000600284 PDE4DIPQ5VU43 2346 aa19.17■□□□□ 0.66
VRK3-221ENST00000600284 CENPFP49454 3210 aa19.16■□□□□ 0.66
VRK3-221ENST00000600284 MAGEB6P1A0A0J9YX57 407 aa19.16■□□□□ 0.66
VRK3-221ENST00000600284 GOLIM4O00461 696 aa19.16■□□□□ 0.66
VRK3-221ENST00000600284 ECM2O94769 699 aaPredicted RBP19.16■□□□□ 0.66
VRK3-221ENST00000600284 EN2P19622 333 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms