RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 FOXP4Q8IVH2 680 aaPredicted RBP16.51■□□□□ 0.23
VRK3-219ENST00000600137 HOOK2Q96ED9 719 aa16.51■□□□□ 0.23
VRK3-219ENST00000600137 ZNF341Q9BYN7 854 aa16.51■□□□□ 0.23
VRK3-219ENST00000600137 PCNTO95613 3336 aa16.5■□□□□ 0.23
VRK3-219ENST00000600137 CYP2D7A0A087X1C5 515 aa16.5■□□□□ 0.23
VRK3-219ENST00000600137 USP17L12C9JPN9 530 aa16.5■□□□□ 0.23
VRK3-219ENST00000600137 USP17L21D6R901 530 aa16.5■□□□□ 0.23
VRK3-219ENST00000600137 IREB2P48200 963 aaKnown RBP16.5■□□□□ 0.23
VRK3-219ENST00000600137 VEGFBP49765 207 aa16.5■□□□□ 0.23
VRK3-219ENST00000600137 JAG1P78504 1218 aa16.5■□□□□ 0.23
VRK3-219ENST00000600137 TTLL12Q14166 644 aaPredicted RBP16.5■□□□□ 0.23
VRK3-219ENST00000600137 C12orf60Q5U649 245 aa16.5■□□□□ 0.23
VRK3-219ENST00000600137 DCAF15Q66K64 600 aa16.5■□□□□ 0.23
VRK3-219ENST00000600137 CYP4F22Q6NT55 531 aa16.5■□□□□ 0.23
VRK3-219ENST00000600137 GIMAP6Q6P9H5 292 aa16.5■□□□□ 0.23
VRK3-219ENST00000600137 IFNL3Q8IZI9 196 aa16.5■□□□□ 0.23
VRK3-219ENST00000600137 ZKSCAN4Q969J2 545 aaPredicted RBP16.5■□□□□ 0.23
VRK3-219ENST00000600137 ZIC5Q96T25 663 aa16.5■□□□□ 0.23
VRK3-219ENST00000600137 MCM9Q9NXL9 1143 aa16.5■□□□□ 0.23
VRK3-219ENST00000600137 GNAT2P19087 354 aa16.49■□□□□ 0.23
VRK3-219ENST00000600137 SLC4A8Q2Y0W8 1093 aa16.49■□□□□ 0.23
VRK3-219ENST00000600137 SBK1Q52WX2 424 aa16.49■□□□□ 0.23
VRK3-219ENST00000600137 CWC27Q6UX04 472 aaKnown RBP16.49■□□□□ 0.23
VRK3-219ENST00000600137 ANKRD13AQ8IZ07 590 aa16.49■□□□□ 0.23
VRK3-219ENST00000600137 EHD4Q9H223 541 aa16.49■□□□□ 0.23
VRK3-219ENST00000600137 HERC5Q9UII4 1024 aaKnown RBP16.49■□□□□ 0.23
VRK3-219ENST00000600137 SNCAIPQ9Y6H5 919 aa16.49■□□□□ 0.23
VRK3-219ENST00000600137 HIP1O00291 1037 aa16.48■□□□□ 0.23
VRK3-219ENST00000600137 SLC10A3P09131 477 aa16.48■□□□□ 0.23
VRK3-219ENST00000600137 GJA5P36382 358 aa16.48■□□□□ 0.23
VRK3-219ENST00000600137 VGLL4Q14135 290 aa16.48■□□□□ 0.23
VRK3-219ENST00000600137 ALX1Q15699 326 aa16.48■□□□□ 0.23
VRK3-219ENST00000600137 NOL9Q5SY16 702 aaKnown RBP16.48■□□□□ 0.23
VRK3-219ENST00000600137 TATDN1Q6P1N9 297 aa16.48■□□□□ 0.23
VRK3-219ENST00000600137 TTC6Q86TZ1 520 aa16.48■□□□□ 0.23
VRK3-219ENST00000600137 RASAL3Q86YV0 1011 aa16.48■□□□□ 0.23
VRK3-219ENST00000600137 CNKSR2Q8WXI2 1034 aa16.48■□□□□ 0.23
VRK3-219ENST00000600137 CAPNS2Q96L46 248 aa16.48■□□□□ 0.23
VRK3-219ENST00000600137 WRNIP1Q96S55 665 aa16.48■□□□□ 0.23
VRK3-219ENST00000600137 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.48■□□□□ 0.23
VRK3-219ENST00000600137 WDR33Q9C0J8 1336 aaKnown RBP16.47■□□□□ 0.23
VRK3-219ENST00000600137 HSPD1P10809 573 aaKnown RBP16.47■□□□□ 0.23
VRK3-219ENST00000600137 ZNF157P51786 506 aaPredicted RBP16.47■□□□□ 0.23
VRK3-219ENST00000600137 SLC10A4Q96EP9 437 aa16.47■□□□□ 0.23
VRK3-219ENST00000600137 DYNLL2Q96FJ2 89 aa16.47■□□□□ 0.23
VRK3-219ENST00000600137 DIAPH3Q9NSV4 1193 aa16.47■□□□□ 0.23
VRK3-219ENST00000600137 SERPINB13Q9UIV8 391 aa16.47■□□□□ 0.23
VRK3-219ENST00000600137 CCDC171Q6TFL3 1326 aa16.46■□□□□ 0.23
VRK3-219ENST00000600137 AOC2O75106 756 aa16.46■□□□□ 0.23
VRK3-219ENST00000600137 POLR3DP05423 398 aaPredicted RBP16.46■□□□□ 0.23
VRK3-219ENST00000600137 HLA-DOAP06340 250 aa16.46■□□□□ 0.23
VRK3-219ENST00000600137 SHMT1P34896 483 aa16.46■□□□□ 0.23
VRK3-219ENST00000600137 SHROOM1Q2M3G4 852 aaPredicted RBP16.46■□□□□ 0.23
VRK3-219ENST00000600137 CCDC102AQ96A19 550 aa16.46■□□□□ 0.23
VRK3-219ENST00000600137 ELP3Q9H9T3 547 aa16.46■□□□□ 0.23
VRK3-219ENST00000600137 TACC3Q9Y6A5 838 aa16.46■□□□□ 0.23
VRK3-219ENST00000600137 CTNND1O60716 968 aaKnown RBP16.45■□□□□ 0.22
VRK3-219ENST00000600137 FGAP02671 866 aa16.45■□□□□ 0.22
VRK3-219ENST00000600137 CAP2P40123 477 aa16.45■□□□□ 0.22
VRK3-219ENST00000600137 SPRYD7Q5W111 196 aa16.45■□□□□ 0.22
VRK3-219ENST00000600137 SLC44A5Q8NCS7 719 aa16.45■□□□□ 0.22
VRK3-219ENST00000600137 PHIPQ8WWQ0 1821 aa16.45■□□□□ 0.22
VRK3-219ENST00000600137 THSD7BQ9C0I4 1608 aa16.45■□□□□ 0.22
VRK3-219ENST00000600137 LAMB1P07942 1786 aa16.44■□□□□ 0.22
VRK3-219ENST00000600137 SPDYE5A6NIY4 337 aa16.44■□□□□ 0.22
VRK3-219ENST00000600137 SGSM2O43147 1006 aa16.44■□□□□ 0.22
VRK3-219ENST00000600137 APPP05067 770 aa16.44■□□□□ 0.22
VRK3-219ENST00000600137 C16orf86Q6ZW13 317 aa16.44■□□□□ 0.22
VRK3-219ENST00000600137 JMYQ8N9B5 988 aa16.44■□□□□ 0.22
VRK3-219ENST00000600137 WNK4Q96J92 1243 aa16.44■□□□□ 0.22
VRK3-219ENST00000600137 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.44■□□□□ 0.22
VRK3-219ENST00000600137 ARPP21Q9UBL0 812 aaPredicted RBP16.44■□□□□ 0.22
VRK3-219ENST00000600137 DOCK1Q14185 1865 aa16.44■□□□□ 0.22
VRK3-219ENST00000600137 ATAD5Q96QE3 1844 aa16.43■□□□□ 0.22
VRK3-219ENST00000600137 ROBO3Q96MS0 1386 aa16.43■□□□□ 0.22
VRK3-219ENST00000600137 PTPRAP18433 802 aa16.43■□□□□ 0.22
VRK3-219ENST00000600137 ECE1P42892 770 aa16.43■□□□□ 0.22
VRK3-219ENST00000600137 CDK8P49336 464 aa16.43■□□□□ 0.22
VRK3-219ENST00000600137 ERO1BQ86YB8 467 aa16.43■□□□□ 0.22
VRK3-219ENST00000600137 SCYL3Q8IZE3 742 aa16.43■□□□□ 0.22
VRK3-219ENST00000600137 CRACR2BQ8N4Y2 399 aaPredicted RBP16.43■□□□□ 0.22
VRK3-219ENST00000600137 OPTNQ96CV9 577 aa16.43■□□□□ 0.22
VRK3-219ENST00000600137 TAOK2Q9UL54 1235 aa16.43■□□□□ 0.22
VRK3-219ENST00000600137 CSADQ9Y600 493 aa16.43■□□□□ 0.22
VRK3-219ENST00000600137 MINDY4BA8MYZ0 360 aa16.42■□□□□ 0.22
VRK3-219ENST00000600137 GUCY1A2P33402 732 aa16.42■□□□□ 0.22
VRK3-219ENST00000600137 MAP2K2P36507 400 aa16.42■□□□□ 0.22
VRK3-219ENST00000600137 TDO2P48775 406 aa16.42■□□□□ 0.22
VRK3-219ENST00000600137 KIF23Q02241 960 aaPredicted RBP16.42■□□□□ 0.22
VRK3-219ENST00000600137 PTH1RQ03431 593 aa16.42■□□□□ 0.22
VRK3-219ENST00000600137 CCDC84Q86UT8 332 aaPredicted RBP16.42■□□□□ 0.22
VRK3-219ENST00000600137 MS4A4AQ96JQ5 239 aa16.42■□□□□ 0.22
VRK3-219ENST00000600137 DSCC1Q9BVC3 393 aa16.42■□□□□ 0.22
VRK3-219ENST00000600137 NACAP1Q9BZK3 213 aa16.42■□□□□ 0.22
VRK3-219ENST00000600137 NAPBQ9H115 298 aa16.42■□□□□ 0.22
VRK3-219ENST00000600137 ANAPC4Q9UJX5 808 aa16.42■□□□□ 0.22
VRK3-219ENST00000600137 ZMYM6O95789 1325 aa16.42■□□□□ 0.22
VRK3-219ENST00000600137 RAD50Q92878 1312 aa16.42■□□□□ 0.22
VRK3-219ENST00000600137 IRF6O14896 467 aa16.41■□□□□ 0.22
VRK3-219ENST00000600137 GDF11O95390 407 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms