RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 VPS53Q5VIR6 699 aa17.16■□□□□ 0.34
VRK3-213ENST00000597215 SAPCD2Q86UD0 394 aa17.16■□□□□ 0.34
VRK3-213ENST00000597215 FOXP4Q8IVH2 680 aaPredicted RBP17.16■□□□□ 0.34
VRK3-213ENST00000597215 IFNL3Q8IZI9 196 aa17.16■□□□□ 0.34
VRK3-213ENST00000597215 NAPBQ9H115 298 aa17.16■□□□□ 0.34
VRK3-213ENST00000597215 EHD4Q9H223 541 aa17.16■□□□□ 0.34
VRK3-213ENST00000597215 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.16■□□□□ 0.34
VRK3-213ENST00000597215 SERPINB13Q9UIV8 391 aa17.16■□□□□ 0.34
VRK3-213ENST00000597215 FZD1Q9UP38 647 aa17.16■□□□□ 0.34
VRK3-213ENST00000597215 OTOFQ9HC10 1997 aa17.16■□□□□ 0.34
VRK3-213ENST00000597215 UNCXA6NJT0 531 aa17.15■□□□□ 0.34
VRK3-213ENST00000597215 UBE2Q2LH0YL09 131 aa17.15■□□□□ 0.34
VRK3-213ENST00000597215 SGSM2O43147 1006 aa17.15■□□□□ 0.34
VRK3-213ENST00000597215 PLCD1P51178 756 aa17.15■□□□□ 0.34
VRK3-213ENST00000597215 ALX1Q15699 326 aa17.15■□□□□ 0.34
VRK3-213ENST00000597215 CTR9Q6PD62 1173 aa17.15■□□□□ 0.34
VRK3-213ENST00000597215 METTL16Q86W50 562 aaKnown RBP17.15■□□□□ 0.34
VRK3-213ENST00000597215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.15■□□□□ 0.34
VRK3-213ENST00000597215 KLRG1Q96E93 195 aa17.15■□□□□ 0.34
VRK3-213ENST00000597215 WRNIP1Q96S55 665 aa17.15■□□□□ 0.34
VRK3-213ENST00000597215 IL25Q9H293 177 aa17.15■□□□□ 0.34
VRK3-213ENST00000597215 TAOK2Q9UL54 1235 aa17.15■□□□□ 0.34
VRK3-213ENST00000597215 FOXP2O15409 715 aa17.14■□□□□ 0.33
VRK3-213ENST00000597215 CYP2D6P10635 497 aa17.14■□□□□ 0.33
VRK3-213ENST00000597215 LDLRAD1Q5T700 205 aa17.14■□□□□ 0.33
VRK3-213ENST00000597215 C12orf60Q5U649 245 aa17.14■□□□□ 0.33
VRK3-213ENST00000597215 ANKRD13AQ8IZ07 590 aa17.14■□□□□ 0.33
VRK3-213ENST00000597215 HHIPL1Q96JK4 782 aa17.14■□□□□ 0.33
VRK3-213ENST00000597215 ESYT1Q9BSJ8 1104 aa17.14■□□□□ 0.33
VRK3-213ENST00000597215 ZNF112Q9UJU3 913 aa17.14■□□□□ 0.33
VRK3-213ENST00000597215 CSADQ9Y600 493 aa17.14■□□□□ 0.33
VRK3-213ENST00000597215 ZMYM6O95789 1325 aa17.14■□□□□ 0.33
VRK3-213ENST00000597215 FAM196BA6NMK8 535 aa17.13■□□□□ 0.33
VRK3-213ENST00000597215 MAP3K9P80192 1104 aa17.13■□□□□ 0.33
VRK3-213ENST00000597215 DSCC1Q9BVC3 393 aa17.13■□□□□ 0.33
VRK3-213ENST00000597215 DNAJC18Q9H819 358 aa17.13■□□□□ 0.33
VRK3-213ENST00000597215 MYH8P13535 1937 aa17.12■□□□□ 0.33
VRK3-213ENST00000597215 CYP2D7A0A087X1C5 515 aa17.12■□□□□ 0.33
VRK3-213ENST00000597215 RASSF10A6NK89 507 aa17.12■□□□□ 0.33
VRK3-213ENST00000597215 PHF20L1A8MW92 1017 aa17.12■□□□□ 0.33
VRK3-213ENST00000597215 MINDY4BA8MYZ0 360 aa17.12■□□□□ 0.33
VRK3-213ENST00000597215 SLURP2P0DP57 97 aa17.12■□□□□ 0.33
VRK3-213ENST00000597215 GABPAQ06546 454 aa17.12■□□□□ 0.33
VRK3-213ENST00000597215 SWAP70Q9UH65 585 aa17.12■□□□□ 0.33
VRK3-213ENST00000597215 ROBO3Q96MS0 1386 aa17.12■□□□□ 0.33
VRK3-213ENST00000597215 FGAP02671 866 aa17.11■□□□□ 0.33
VRK3-213ENST00000597215 INPP5BP32019 993 aa17.11■□□□□ 0.33
VRK3-213ENST00000597215 HTRA3P83110 453 aa17.11■□□□□ 0.33
VRK3-213ENST00000597215 EVX2Q03828 476 aa17.11■□□□□ 0.33
VRK3-213ENST00000597215 VGLL4Q14135 290 aa17.11■□□□□ 0.33
VRK3-213ENST00000597215 DEFB115Q30KQ5 88 aa17.11■□□□□ 0.33
VRK3-213ENST00000597215 RGMBQ6NW40 437 aa17.11■□□□□ 0.33
VRK3-213ENST00000597215 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.11■□□□□ 0.33
VRK3-213ENST00000597215 KIAA1211Q6ZU35 1233 aa17.11■□□□□ 0.33
VRK3-213ENST00000597215 C16orf86Q6ZW13 317 aa17.11■□□□□ 0.33
VRK3-213ENST00000597215 DOCK1Q14185 1865 aa17.11■□□□□ 0.33
VRK3-213ENST00000597215 ATAD5Q96QE3 1844 aa17.1■□□□□ 0.33
VRK3-213ENST00000597215 CTNND1O60716 968 aaKnown RBP17.1■□□□□ 0.33
VRK3-213ENST00000597215 SLC3A2P08195 630 aaKnown RBP17.1■□□□□ 0.33
VRK3-213ENST00000597215 ZNF157P51786 506 aaPredicted RBP17.1■□□□□ 0.33
VRK3-213ENST00000597215 PPARAQ07869 468 aa17.1■□□□□ 0.33
VRK3-213ENST00000597215 NOL9Q5SY16 702 aaKnown RBP17.1■□□□□ 0.33
VRK3-213ENST00000597215 PAXIP1Q6ZW49 1069 aaPredicted RBP17.1■□□□□ 0.33
VRK3-213ENST00000597215 ZKSCAN4Q969J2 545 aaPredicted RBP17.1■□□□□ 0.33
VRK3-213ENST00000597215 SLC10A4Q96EP9 437 aa17.1■□□□□ 0.33
VRK3-213ENST00000597215 DYNLL2Q96FJ2 89 aa17.1■□□□□ 0.33
VRK3-213ENST00000597215 CLMNQ96JQ2 1002 aa17.1■□□□□ 0.33
VRK3-213ENST00000597215 CTNNA3Q9UI47 895 aa17.1■□□□□ 0.33
VRK3-213ENST00000597215 LAMA4Q16363 1823 aa17.1■□□□□ 0.33
VRK3-213ENST00000597215 SHMT1P34896 483 aa17.09■□□□□ 0.33
VRK3-213ENST00000597215 TATDN1Q6P1N9 297 aa17.09■□□□□ 0.33
VRK3-213ENST00000597215 SCYL3Q8IZE3 742 aa17.09■□□□□ 0.33
VRK3-213ENST00000597215 ELP3Q9H9T3 547 aa17.09■□□□□ 0.33
VRK3-213ENST00000597215 ZNF287Q9HBT7 754 aa17.09■□□□□ 0.33
VRK3-213ENST00000597215 SNCAIPQ9Y6H5 919 aa17.09■□□□□ 0.33
VRK3-213ENST00000597215 SMIM22K7EJ46 135 aa17.08■□□□□ 0.32
VRK3-213ENST00000597215 CAP2P40123 477 aa17.08■□□□□ 0.32
VRK3-213ENST00000597215 ECE1P42892 770 aa17.08■□□□□ 0.32
VRK3-213ENST00000597215 CDK8P49336 464 aa17.08■□□□□ 0.32
VRK3-213ENST00000597215 PTH1RQ03431 593 aa17.08■□□□□ 0.32
VRK3-213ENST00000597215 CERKLQ49MI3 558 aaPredicted RBP17.08■□□□□ 0.32
VRK3-213ENST00000597215 RASAL3Q86YV0 1011 aa17.08■□□□□ 0.32
VRK3-213ENST00000597215 SLC44A5Q8NCS7 719 aa17.08■□□□□ 0.32
VRK3-213ENST00000597215 CCDC102AQ96A19 550 aa17.08■□□□□ 0.32
VRK3-213ENST00000597215 ANO2Q9NQ90 1003 aa17.08■□□□□ 0.32
VRK3-213ENST00000597215 PICK1Q9NRD5 415 aa17.08■□□□□ 0.32
VRK3-213ENST00000597215 GINM1Q9NU53 330 aa17.08■□□□□ 0.32
VRK3-213ENST00000597215 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.08■□□□□ 0.32
VRK3-213ENST00000597215 ANAPC4Q9UJX5 808 aa17.08■□□□□ 0.32
VRK3-213ENST00000597215 U3KPZ7 1027 aaPredicted RBP17.08■□□□□ 0.32
VRK3-213ENST00000597215 ASNSP08243 561 aa17.07■□□□□ 0.32
VRK3-213ENST00000597215 SLC10A3P09131 477 aa17.07■□□□□ 0.32
VRK3-213ENST00000597215 PDE4BQ07343 736 aa17.07■□□□□ 0.32
VRK3-213ENST00000597215 RRP1BQ14684 758 aaKnown RBP17.07■□□□□ 0.32
VRK3-213ENST00000597215 CYP4F22Q6NT55 531 aa17.07■□□□□ 0.32
VRK3-213ENST00000597215 ERO1BQ86YB8 467 aa17.07■□□□□ 0.32
VRK3-213ENST00000597215 STK11IPQ8N1F8 1099 aa17.07■□□□□ 0.32
VRK3-213ENST00000597215 CAPNS2Q96L46 248 aa17.07■□□□□ 0.32
VRK3-213ENST00000597215 LSG1Q9H089 658 aaKnown RBP17.07■□□□□ 0.32
VRK3-213ENST00000597215 MKNK2Q9HBH9 465 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms