RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 GJD2Q9UKL4 321 aa10.62□□□□□ -0.71
SMG9-202ENST00000594081 EYA2O00167 538 aa10.61□□□□□ -0.71
SMG9-202ENST00000594081 COL6A1P12109 1028 aa10.61□□□□□ -0.71
SMG9-202ENST00000594081 PRKAR2AP13861 404 aaKnown RBP10.61□□□□□ -0.71
SMG9-202ENST00000594081 CCDC184Q52MB2 194 aa10.61□□□□□ -0.71
SMG9-202ENST00000594081 FAM109BQ6ICB4 259 aaPredicted RBP10.61□□□□□ -0.71
SMG9-202ENST00000594081 SIPA1L1O43166 1804 aa10.61□□□□□ -0.71
SMG9-202ENST00000594081 FAM196BA6NMK8 535 aa10.6□□□□□ -0.71
SMG9-202ENST00000594081 POTEB2H3BUK9 544 aa10.6□□□□□ -0.71
SMG9-202ENST00000594081 HMGCS2P54868 508 aa10.6□□□□□ -0.71
SMG9-202ENST00000594081 PABPC4Q13310 644 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMG9-202ENST00000594081 ATP2B3Q16720 1220 aa10.6□□□□□ -0.71
SMG9-202ENST00000594081 LRRC26Q2I0M4 334 aa10.6□□□□□ -0.71
SMG9-202ENST00000594081 DZIP1Q86YF9 867 aaKnown RBP10.6□□□□□ -0.71
SMG9-202ENST00000594081 WDR63Q8IWG1 891 aa10.6□□□□□ -0.71
SMG9-202ENST00000594081 SOCS4Q8WXH5 440 aa10.6□□□□□ -0.71
SMG9-202ENST00000594081 ASCC2Q9H1I8 757 aaPredicted RBP10.6□□□□□ -0.71
SMG9-202ENST00000594081 SALL2Q9Y467 1007 aaPredicted RBP10.6□□□□□ -0.71
SMG9-202ENST00000594081 EYSQ5T1H1 3165 aa10.6□□□□□ -0.71
SMG9-202ENST00000594081 SEMA3EO15041 775 aa10.59□□□□□ -0.71
SMG9-202ENST00000594081 CYP2B6P20813 491 aa10.59□□□□□ -0.71
SMG9-202ENST00000594081 BTDP43251 543 aa10.59□□□□□ -0.71
SMG9-202ENST00000594081 PHKA1P46020 1223 aa10.59□□□□□ -0.71
SMG9-202ENST00000594081 RFX5P48382 616 aaPredicted RBP10.59□□□□□ -0.71
SMG9-202ENST00000594081 SPP2Q13103 211 aa10.59□□□□□ -0.71
SMG9-202ENST00000594081 ZNF697Q5TEC3 545 aa10.59□□□□□ -0.71
SMG9-202ENST00000594081 ATG9AQ7Z3C6 839 aa10.59□□□□□ -0.71
SMG9-202ENST00000594081 ZNF280CQ8ND82 737 aa10.59□□□□□ -0.71
SMG9-202ENST00000594081 OSBPL5Q9H0X9 879 aaPredicted RBP10.59□□□□□ -0.71
SMG9-202ENST00000594081 GNL3LQ9NVN8 582 aaKnown RBP10.59□□□□□ -0.71
SMG9-202ENST00000594081 MORF4L1Q9UBU8 362 aa10.59□□□□□ -0.71
SMG9-202ENST00000594081 DENND2AQ9ULE3 1009 aa10.59□□□□□ -0.71
SMG9-202ENST00000594081 MROH7-TTC4A0A0A0MT08 1334 aa10.58□□□□□ -0.71
SMG9-202ENST00000594081 ZKSCAN1P17029 563 aaPredicted RBP10.58□□□□□ -0.72
SMG9-202ENST00000594081 CCND3P30281 292 aaPredicted RBP10.58□□□□□ -0.72
SMG9-202ENST00000594081 C1QBPQ07021 282 aaKnown RBP10.58□□□□□ -0.72
SMG9-202ENST00000594081 CACNB2Q08289 660 aaPredicted RBP10.58□□□□□ -0.72
SMG9-202ENST00000594081 ZGPATQ8N5A5 531 aaKnown RBP10.58□□□□□ -0.72
SMG9-202ENST00000594081 NUDT12Q9BQG2 462 aa10.58□□□□□ -0.72
SMG9-202ENST00000594081 TBC1D2Q9BYX2 928 aa10.58□□□□□ -0.72
SMG9-202ENST00000594081 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMG9-202ENST00000594081 PRDM6Q9NQX0 595 aa10.58□□□□□ -0.72
SMG9-202ENST00000594081 CDH23Q9H251 3354 aa10.57□□□□□ -0.72
SMG9-202ENST00000594081 TBC1D12O60347 775 aa10.57□□□□□ -0.72
SMG9-202ENST00000594081 PEX10O60683 326 aa10.57□□□□□ -0.72
SMG9-202ENST00000594081 XRCC5P13010 732 aaKnown RBP10.57□□□□□ -0.72
SMG9-202ENST00000594081 IRX3P78415 501 aaPredicted RBP10.57□□□□□ -0.72
SMG9-202ENST00000594081 RASGRF1Q13972 1273 aa10.57□□□□□ -0.72
SMG9-202ENST00000594081 SH3D19Q5HYK7 790 aa10.57□□□□□ -0.72
SMG9-202ENST00000594081 SLF2Q8IX21 1173 aa10.57□□□□□ -0.72
SMG9-202ENST00000594081 MAFAQ8NHW3 353 aaPredicted RBP10.57□□□□□ -0.72
SMG9-202ENST00000594081 SIL1Q9H173 461 aa10.57□□□□□ -0.72
SMG9-202ENST00000594081 TXNRD2Q9NNW7 524 aa10.57□□□□□ -0.72
SMG9-202ENST00000594081 ABCF2Q9UG63 623 aa10.57□□□□□ -0.72
SMG9-202ENST00000594081 PDS5AQ29RF7 1337 aaKnown RBP10.57□□□□□ -0.72
SMG9-202ENST00000594081 USP17L5A8MUK1 530 aa10.56□□□□□ -0.72
SMG9-202ENST00000594081 CIAO1O76071 339 aa10.56□□□□□ -0.72
SMG9-202ENST00000594081 CAP2P40123 477 aa10.56□□□□□ -0.72
SMG9-202ENST00000594081 RHBDL3P58872 404 aa10.56□□□□□ -0.72
SMG9-202ENST00000594081 MTMR2Q13614 643 aa10.56□□□□□ -0.72
SMG9-202ENST00000594081 PDE3AQ14432 1141 aa10.56□□□□□ -0.72
SMG9-202ENST00000594081 CCL14Q16627 93 aa10.56□□□□□ -0.72
SMG9-202ENST00000594081 LHX8Q68G74 356 aa10.56□□□□□ -0.72
SMG9-202ENST00000594081 TRMT44Q8IYL2 757 aaKnown RBP10.56□□□□□ -0.72
SMG9-202ENST00000594081 FAM163AQ96GL9 167 aaPredicted RBP10.56□□□□□ -0.72
SMG9-202ENST00000594081 CDX2Q99626 313 aaPredicted RBP10.56□□□□□ -0.72
SMG9-202ENST00000594081 APBA2Q99767 749 aa10.56□□□□□ -0.72
SMG9-202ENST00000594081 LBHD1Q9BQE6 289 aaPredicted RBP10.56□□□□□ -0.72
SMG9-202ENST00000594081 USP44Q9H0E7 712 aa10.56□□□□□ -0.72
SMG9-202ENST00000594081 AS3MTQ9HBK9 375 aa10.56□□□□□ -0.72
SMG9-202ENST00000594081 FOCADQ5VW36 1801 aa10.56□□□□□ -0.72
SMG9-202ENST00000594081 CDK5RAP2Q96SN8 1893 aa10.55□□□□□ -0.72
SMG9-202ENST00000594081 RLFQ13129 1914 aa10.55□□□□□ -0.72
SMG9-202ENST00000594081 TTC28Q96AY4 2481 aa10.55□□□□□ -0.72
SMG9-202ENST00000594081 ZBTB22O15209 634 aa10.55□□□□□ -0.72
SMG9-202ENST00000594081 ADORA1P30542 326 aa10.55□□□□□ -0.72
SMG9-202ENST00000594081 MAPK4P31152 587 aa10.55□□□□□ -0.72
SMG9-202ENST00000594081 RGS2P41220 211 aa10.55□□□□□ -0.72
SMG9-202ENST00000594081 HERVK_113P62684 666 aa10.55□□□□□ -0.72
SMG9-202ENST00000594081 RRP1BQ14684 758 aaKnown RBP10.55□□□□□ -0.72
SMG9-202ENST00000594081 CCDC102BQ68D86 513 aa10.55□□□□□ -0.72
SMG9-202ENST00000594081 GPRC5AQ8NFJ5 357 aa10.55□□□□□ -0.72
SMG9-202ENST00000594081 CEP126Q9P2H0 1117 aa10.55□□□□□ -0.72
SMG9-202ENST00000594081 LAMA2P24043 3122 aaKnown RBP10.55□□□□□ -0.72
SMG9-202ENST00000594081 PTPRCP08575 1304 aa10.55□□□□□ -0.72
SMG9-202ENST00000594081 GPR75-ASB3A0A0A6YYF3 556 aa10.54□□□□□ -0.72
SMG9-202ENST00000594081 KCNA4P22459 653 aa10.54□□□□□ -0.72
SMG9-202ENST00000594081 MECOMQ03112 1051 aa10.54□□□□□ -0.72
SMG9-202ENST00000594081 GPR142Q7Z601 462 aa10.54□□□□□ -0.72
SMG9-202ENST00000594081 ZNF384Q8TF68 577 aa10.54□□□□□ -0.72
SMG9-202ENST00000594081 USP6NLQ92738 828 aa10.54□□□□□ -0.72
SMG9-202ENST00000594081 SENP6Q9GZR1 1112 aaPredicted RBP10.54□□□□□ -0.72
SMG9-202ENST00000594081 PORCNQ9H237 461 aa10.54□□□□□ -0.72
SMG9-202ENST00000594081 TMOD4Q9NZQ9 345 aa10.54□□□□□ -0.72
SMG9-202ENST00000594081 FBXO3Q9UK99 471 aa10.54□□□□□ -0.72
SMG9-202ENST00000594081 PRUNE2Q8WUY3 3088 aa10.54□□□□□ -0.72
SMG9-202ENST00000594081 HOXA7P31268 230 aaPredicted RBP10.53□□□□□ -0.72
SMG9-202ENST00000594081 ATN1P54259 1190 aaPredicted RBP10.53□□□□□ -0.72
SMG9-202ENST00000594081 BACE1P56817 501 aa10.53□□□□□ -0.72
SMG9-202ENST00000594081 ERVK-9P63128 1117 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms