RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 C8orf34Q49A92 452 aa23.51■■□□□ 1.35
LSM4-203ENST00000593829 ZKSCAN4Q969J2 545 aaPredicted RBP23.51■■□□□ 1.35
LSM4-203ENST00000593829 GPAA1O43292 621 aa23.5■■□□□ 1.35
LSM4-203ENST00000593829 SLURP2P0DP57 97 aa23.5■■□□□ 1.35
LSM4-203ENST00000593829 TTC6Q86TZ1 520 aa23.5■■□□□ 1.35
LSM4-203ENST00000593829 FOXP4Q8IVH2 680 aaPredicted RBP23.5■■□□□ 1.35
LSM4-203ENST00000593829 SEC62Q99442 399 aaKnown RBP23.5■■□□□ 1.35
LSM4-203ENST00000593829 ELP3Q9H9T3 547 aa23.5■■□□□ 1.35
LSM4-203ENST00000593829 MCM9Q9NXL9 1143 aa23.5■■□□□ 1.35
LSM4-203ENST00000593829 PHF20L1A8MW92 1017 aa23.49■■□□□ 1.35
LSM4-203ENST00000593829 INPP5BP32019 993 aa23.49■■□□□ 1.35
LSM4-203ENST00000593829 SLC4A8Q2Y0W8 1093 aa23.49■■□□□ 1.35
LSM4-203ENST00000593829 CRACR2BQ8N4Y2 399 aaPredicted RBP23.49■■□□□ 1.35
LSM4-203ENST00000593829 OTOFQ9HC10 1997 aa23.49■■□□□ 1.35
LSM4-203ENST00000593829 POLR3DP05423 398 aaPredicted RBP23.49■■□□□ 1.35
LSM4-203ENST00000593829 GNAT2P19087 354 aa23.49■■□□□ 1.35
LSM4-203ENST00000593829 TRIM34Q9BYJ4 488 aa23.49■■□□□ 1.35
LSM4-203ENST00000593829 FAM196BA6NMK8 535 aa23.48■■□□□ 1.35
LSM4-203ENST00000593829 GSPT1P15170 499 aaKnown RBP23.48■■□□□ 1.35
LSM4-203ENST00000593829 SPRYD7Q5W111 196 aa23.48■■□□□ 1.35
LSM4-203ENST00000593829 METTL16Q86W50 562 aaKnown RBP23.48■■□□□ 1.35
LSM4-203ENST00000593829 HELLSQ9NRZ9 838 aa23.48■■□□□ 1.35
LSM4-203ENST00000593829 SNCAIPQ9Y6H5 919 aa23.48■■□□□ 1.35
LSM4-203ENST00000593829 MYH1P12882 1939 aa23.48■■□□□ 1.35
LSM4-203ENST00000593829 SDSP20132 328 aa23.47■■□□□ 1.35
LSM4-203ENST00000593829 WNK4Q96J92 1243 aa23.47■■□□□ 1.35
LSM4-203ENST00000593829 THSD7BQ9C0I4 1608 aa23.47■■□□□ 1.35
LSM4-203ENST00000593829 ZBTB48P10074 688 aaPredicted RBP23.47■■□□□ 1.35
LSM4-203ENST00000593829 GSE1Q14687 1217 aa23.47■■□□□ 1.35
LSM4-203ENST00000593829 NFKBIBQ15653 356 aa23.47■■□□□ 1.35
LSM4-203ENST00000593829 ZIC5Q96T25 663 aa23.47■■□□□ 1.35
LSM4-203ENST00000593829 EHD4Q9H223 541 aa23.47■■□□□ 1.35
LSM4-203ENST00000593829 NAV1Q8NEY1 1877 aa23.47■■□□□ 1.35
LSM4-203ENST00000593829 CTNND1O60716 968 aaKnown RBP23.46■■□□□ 1.35
LSM4-203ENST00000593829 KIF23Q02241 960 aaPredicted RBP23.46■■□□□ 1.35
LSM4-203ENST00000593829 MKRN3Q13064 507 aaKnown RBP23.46■■□□□ 1.35
LSM4-203ENST00000593829 NOL9Q5SY16 702 aaKnown RBP23.46■■□□□ 1.35
LSM4-203ENST00000593829 OPTNQ96CV9 577 aa23.46■■□□□ 1.35
LSM4-203ENST00000593829 FAM227BQ96M60 508 aa23.46■■□□□ 1.35
LSM4-203ENST00000593829 SERPINB13Q9UIV8 391 aa23.46■■□□□ 1.35
LSM4-203ENST00000593829 DDX60LQ5H9U9 1706 aaKnown RBP23.45■■□□□ 1.35
LSM4-203ENST00000593829 GSG1L2A8MUP6 293 aa23.45■■□□□ 1.35
LSM4-203ENST00000593829 HIP1O00291 1037 aa23.45■■□□□ 1.35
LSM4-203ENST00000593829 PLCD1P51178 756 aa23.45■■□□□ 1.35
LSM4-203ENST00000593829 GIMAP6Q6P9H5 292 aa23.45■■□□□ 1.35
LSM4-203ENST00000593829 ERO1BQ86YB8 467 aa23.45■■□□□ 1.35
LSM4-203ENST00000593829 AMOTL1Q8IY63 956 aa23.45■■□□□ 1.35
LSM4-203ENST00000593829 A0A0D9SFI3 127 aa23.45■■□□□ 1.34
LSM4-203ENST00000593829 MAP2K1Q02750 393 aaPredicted RBP23.45■■□□□ 1.34
LSM4-203ENST00000593829 NMIQ13287 307 aaPredicted RBP23.45■■□□□ 1.34
LSM4-203ENST00000593829 MCMDC2Q4G0Z9 681 aa23.45■■□□□ 1.34
LSM4-203ENST00000593829 SCYL3Q8IZE3 742 aa23.45■■□□□ 1.34
LSM4-203ENST00000593829 DNAJC18Q9H819 358 aa23.45■■□□□ 1.34
LSM4-203ENST00000593829 SIPA1L1O43166 1804 aa23.45■■□□□ 1.34
LSM4-203ENST00000593829 SPDYE5A6NIY4 337 aa23.44■■□□□ 1.34
LSM4-203ENST00000593829 PATL2C9JE40 543 aaKnown RBP23.44■■□□□ 1.34
LSM4-203ENST00000593829 APPP05067 770 aa23.44■■□□□ 1.34
LSM4-203ENST00000593829 SKAP1Q86WV1 359 aa23.44■■□□□ 1.34
LSM4-203ENST00000593829 REM2Q8IYK8 340 aaPredicted RBP23.44■■□□□ 1.34
LSM4-203ENST00000593829 DIAPH3Q9NSV4 1193 aa23.44■■□□□ 1.34
LSM4-203ENST00000593829 USP17L12C9JPN9 530 aa23.43■■□□□ 1.34
LSM4-203ENST00000593829 USP17L21D6R901 530 aa23.43■■□□□ 1.34
LSM4-203ENST00000593829 GJA5P36382 358 aa23.43■■□□□ 1.34
LSM4-203ENST00000593829 CCDC129Q6ZRS4 1044 aa23.43■■□□□ 1.34
LSM4-203ENST00000593829 IL27Q8NEV9 243 aa23.43■■□□□ 1.34
LSM4-203ENST00000593829 CNKSR2Q8WXI2 1034 aa23.43■■□□□ 1.34
LSM4-203ENST00000593829 OTUD5Q96G74 571 aa23.43■■□□□ 1.34
LSM4-203ENST00000593829 PICK1Q9NRD5 415 aa23.43■■□□□ 1.34
LSM4-203ENST00000593829 DAXXQ9UER7 740 aaPredicted RBP23.43■■□□□ 1.34
LSM4-203ENST00000593829 PCNTO95613 3336 aa23.42■■□□□ 1.34
LSM4-203ENST00000593829 CYP2D6P10635 497 aa23.42■■□□□ 1.34
LSM4-203ENST00000593829 PPATQ06203 517 aa23.42■■□□□ 1.34
LSM4-203ENST00000593829 C12orf60Q5U649 245 aa23.42■■□□□ 1.34
LSM4-203ENST00000593829 CTR9Q6PD62 1173 aa23.42■■□□□ 1.34
LSM4-203ENST00000593829 NACAP1Q9BZK3 213 aa23.42■■□□□ 1.34
LSM4-203ENST00000593829 ARPP21Q9UBL0 812 aaPredicted RBP23.42■■□□□ 1.34
LSM4-203ENST00000593829 CAP2P40123 477 aa23.41■■□□□ 1.34
LSM4-203ENST00000593829 TAOK2Q9UL54 1235 aa23.41■■□□□ 1.34
LSM4-203ENST00000593829 TDO2P48775 406 aa23.41■■□□□ 1.34
LSM4-203ENST00000593829 GABPAQ06546 454 aa23.41■■□□□ 1.34
LSM4-203ENST00000593829 PPIL2Q13356 520 aa23.41■■□□□ 1.34
LSM4-203ENST00000593829 RRP1BQ14684 758 aaKnown RBP23.41■■□□□ 1.34
LSM4-203ENST00000593829 CWC27Q6UX04 472 aaKnown RBP23.41■■□□□ 1.34
LSM4-203ENST00000593829 IFNL3Q8IZI9 196 aa23.41■■□□□ 1.34
LSM4-203ENST00000593829 EPB41L4AQ9HCS5 686 aaPredicted RBP23.41■■□□□ 1.34
LSM4-203ENST00000593829 WBP1LQ9NX94 342 aa23.41■■□□□ 1.34
LSM4-203ENST00000593829 MANSC4A6NHS7 340 aaPredicted RBP23.4■■□□□ 1.34
LSM4-203ENST00000593829 EVX2Q03828 476 aa23.4■■□□□ 1.34
LSM4-203ENST00000593829 SREBF2Q12772 1141 aa23.4■■□□□ 1.34
LSM4-203ENST00000593829 SBK1Q52WX2 424 aa23.4■■□□□ 1.34
LSM4-203ENST00000593829 TATDN1Q6P1N9 297 aa23.4■■□□□ 1.34
LSM4-203ENST00000593829 BEGAINQ9BUH8 593 aa23.4■■□□□ 1.34
LSM4-203ENST00000593829 BAZ2AQ9UIF9 1905 aaKnown RBP23.4■■□□□ 1.34
LSM4-203ENST00000593829 CYP2D7A0A087X1C5 515 aa23.39■■□□□ 1.34
LSM4-203ENST00000593829 PTPRAP18433 802 aa23.39■■□□□ 1.34
LSM4-203ENST00000593829 MFAP1P55081 439 aaKnown RBP23.39■■□□□ 1.34
LSM4-203ENST00000593829 INHBEP58166 350 aa23.39■■□□□ 1.33
LSM4-203ENST00000593829 SWAP70Q9UH65 585 aa23.39■■□□□ 1.33
LSM4-203ENST00000593829 ZHX2Q9Y6X8 837 aa23.39■■□□□ 1.33
LSM4-203ENST00000593829 CCDC171Q6TFL3 1326 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms