RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-221	ENST00000593639	ZNF280C	Q8ND82	737 aa		11.49	□□□□□ -0.57
SRRM1-221	ENST00000593639	FAM161B	Q96MY7	647 aa		11.49	□□□□□ -0.57
SRRM1-221	ENST00000593639	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.49	□□□□□ -0.57
SRRM1-221	ENST00000593639	GNL3L	Q9NVN8	582 aa	Known RBP	11.49	□□□□□ -0.57
SRRM1-221	ENST00000593639	DENND2A	Q9ULE3	1009 aa		11.49	□□□□□ -0.57
SRRM1-221	ENST00000593639	SEMA3E	O15041	775 aa		11.48	□□□□□ -0.57
SRRM1-221	ENST00000593639	TBC1D12	O60347	775 aa		11.48	□□□□□ -0.57
SRRM1-221	ENST00000593639	BTD	P43251	543 aa		11.48	□□□□□ -0.57
SRRM1-221	ENST00000593639	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.48	□□□□□ -0.57
SRRM1-221	ENST00000593639	RRP1B	Q14684	758 aa	Known RBP	11.48	□□□□□ -0.57
SRRM1-221	ENST00000593639	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.48	□□□□□ -0.57
SRRM1-221	ENST00000593639	FAM163A	Q96GL9	167 aa	Predicted RBP	11.48	□□□□□ -0.57
SRRM1-221	ENST00000593639	MORF4L1	Q9UBU8	362 aa		11.48	□□□□□ -0.57
SRRM1-221	ENST00000593639	MGAM	O43451	1857 aa		11.47	□□□□□ -0.57
SRRM1-221	ENST00000593639	ADORA1	P30542	326 aa		11.47	□□□□□ -0.57
SRRM1-221	ENST00000593639	RHBDL3	P58872	404 aa		11.47	□□□□□ -0.57
SRRM1-221	ENST00000593639	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
SRRM1-221	ENST00000593639	LHX8	Q68G74	356 aa		11.47	□□□□□ -0.57
SRRM1-221	ENST00000593639	DZIP1	Q86YF9	867 aa	Known RBP	11.47	□□□□□ -0.57
SRRM1-221	ENST00000593639	MRPL50	Q8N5N7	158 aa	Known RBP	11.47	□□□□□ -0.57
SRRM1-221	ENST00000593639	SIL1	Q9H173	461 aa		11.47	□□□□□ -0.57
SRRM1-221	ENST00000593639	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.47	□□□□□ -0.57	1e-6	■■■■■ 31.8
SRRM1-221	ENST00000593639	CIAO1	O76071	339 aa		11.46	□□□□□ -0.57
SRRM1-221	ENST00000593639	XRCC5	P13010	732 aa	Known RBP	11.46	□□□□□ -0.57
SRRM1-221	ENST00000593639	CCND3	P30281	292 aa	Predicted RBP	11.46	□□□□□ -0.57
SRRM1-221	ENST00000593639	CACNB2	Q08289	660 aa	Predicted RBP	11.46	□□□□□ -0.57
SRRM1-221	ENST00000593639	RASGRF1	Q13972	1273 aa		11.46	□□□□□ -0.57
SRRM1-221	ENST00000593639	SH3D19	Q5HYK7	790 aa		11.46	□□□□□ -0.57
SRRM1-221	ENST00000593639	CCDC102B	Q68D86	513 aa		11.46	□□□□□ -0.57
SRRM1-221	ENST00000593639	ZGPAT	Q8N5A5	531 aa	Known RBP	11.46	□□□□□ -0.57
SRRM1-221	ENST00000593639	ZNF384	Q8TF68	577 aa		11.46	□□□□□ -0.57
SRRM1-221	ENST00000593639	SOCS4	Q8WXH5	440 aa		11.46	□□□□□ -0.57
SRRM1-221	ENST00000593639	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.46	□□□□□ -0.57
SRRM1-221	ENST00000593639	TXNRD2	Q9NNW7	524 aa		11.46	□□□□□ -0.57
SRRM1-221	ENST00000593639	CEP126	Q9P2H0	1117 aa		11.46	□□□□□ -0.57
SRRM1-221	ENST00000593639	ABCF2	Q9UG63	623 aa		11.46	□□□□□ -0.57
SRRM1-221	ENST00000593639	COL2A1	P02458	1487 aa	Predicted RBP	11.45	□□□□□ -0.58
SRRM1-221	ENST00000593639	MROH7-TTC4	A0A0A0MT08	1334 aa		11.45	□□□□□ -0.58
SRRM1-221	ENST00000593639	GPR75-ASB3	A0A0A6YYF3	556 aa		11.45	□□□□□ -0.58
SRRM1-221	ENST00000593639	ZBTB22	O15209	634 aa		11.45	□□□□□ -0.58
SRRM1-221	ENST00000593639	ZKSCAN1	P17029	563 aa	Predicted RBP	11.45	□□□□□ -0.58
SRRM1-221	ENST00000593639	CAP2	P40123	477 aa		11.45	□□□□□ -0.58
SRRM1-221	ENST00000593639	CCL14	Q16627	93 aa		11.45	□□□□□ -0.58
SRRM1-221	ENST00000593639	USP6NL	Q92738	828 aa		11.45	□□□□□ -0.58
SRRM1-221	ENST00000593639	P2RX7	Q99572	595 aa	Known RBP	11.45	□□□□□ -0.58
SRRM1-221	ENST00000593639	NUDT12	Q9BQG2	462 aa		11.45	□□□□□ -0.58
SRRM1-221	ENST00000593639	DDX60L	Q5H9U9	1706 aa	Known RBP	11.44	□□□□□ -0.58
SRRM1-221	ENST00000593639	PTPRC	P08575	1304 aa		11.44	□□□□□ -0.58
SRRM1-221	ENST00000593639	DOCK3	Q8IZD9	2030 aa		11.44	□□□□□ -0.58
SRRM1-221	ENST00000593639	USP17L5	A8MUK1	530 aa		11.44	□□□□□ -0.58
SRRM1-221	ENST00000593639	NPM3	O75607	178 aa	Known RBP	11.44	□□□□□ -0.58
SRRM1-221	ENST00000593639	IRX3	P78415	501 aa	Predicted RBP	11.44	□□□□□ -0.58
SRRM1-221	ENST00000593639	MECOM	Q03112	1051 aa		11.44	□□□□□ -0.58
SRRM1-221	ENST00000593639	MTMR2	Q13614	643 aa		11.44	□□□□□ -0.58
SRRM1-221	ENST00000593639	SLF2	Q8IX21	1173 aa		11.44	□□□□□ -0.58
SRRM1-221	ENST00000593639	GPRC5A	Q8NFJ5	357 aa		11.44	□□□□□ -0.58
SRRM1-221	ENST00000593639	CDX2	Q99626	313 aa	Predicted RBP	11.44	□□□□□ -0.58
SRRM1-221	ENST00000593639	TBC1D2	Q9BYX2	928 aa		11.44	□□□□□ -0.58
SRRM1-221	ENST00000593639	PRDM6	Q9NQX0	595 aa		11.44	□□□□□ -0.58
SRRM1-221	ENST00000593639	FBXO3	Q9UK99	471 aa		11.44	□□□□□ -0.58
SRRM1-221	ENST00000593639	CACNA1F	O60840	1977 aa		11.44	□□□□□ -0.58
SRRM1-221	ENST00000593639	PDS5A	Q29RF7	1337 aa	Known RBP	11.43	□□□□□ -0.58
SRRM1-221	ENST00000593639	HOXA7	P31268	230 aa	Predicted RBP	11.43	□□□□□ -0.58
SRRM1-221	ENST00000593639	IL15	P40933	162 aa	Predicted RBP	11.43	□□□□□ -0.58
SRRM1-221	ENST00000593639	HERVK_113	P62684	666 aa		11.43	□□□□□ -0.58
SRRM1-221	ENST00000593639	JAG1	P78504	1218 aa		11.43	□□□□□ -0.58
SRRM1-221	ENST00000593639		Q3C1V9	767 aa		11.43	□□□□□ -0.58
SRRM1-221	ENST00000593639	MORN1	Q5T089	497 aa		11.43	□□□□□ -0.58
SRRM1-221	ENST00000593639	ZNF697	Q5TEC3	545 aa		11.43	□□□□□ -0.58
SRRM1-221	ENST00000593639	POTEE	Q6S8J3	1075 aa		11.43	□□□□□ -0.58
SRRM1-221	ENST00000593639	TRMT44	Q8IYL2	757 aa	Known RBP	11.43	□□□□□ -0.58
SRRM1-221	ENST00000593639	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.43	□□□□□ -0.58
SRRM1-221	ENST00000593639	WDR18	Q9BV38	432 aa		11.43	□□□□□ -0.58
SRRM1-221	ENST00000593639	PORCN	Q9H237	461 aa		11.43	□□□□□ -0.58
SRRM1-221	ENST00000593639	MRS2	Q9HD23	443 aa		11.43	□□□□□ -0.58
SRRM1-221	ENST00000593639	RBPJL	Q9UBG7	517 aa		11.43	□□□□□ -0.58
SRRM1-221	ENST00000593639	PA2G4	Q9UQ80	394 aa	Known RBP	11.43	□□□□□ -0.58
SRRM1-221	ENST00000593639	DOCK2	Q92608	1830 aa		11.42	□□□□□ -0.58
SRRM1-221	ENST00000593639	MAPK4	P31152	587 aa		11.42	□□□□□ -0.58
SRRM1-221	ENST00000593639	RGS2	P41220	211 aa		11.42	□□□□□ -0.58
SRRM1-221	ENST00000593639	BACE1	P56817	501 aa		11.42	□□□□□ -0.58
SRRM1-221	ENST00000593639	TIMM10	P62072	90 aa		11.42	□□□□□ -0.58
SRRM1-221	ENST00000593639	PDE3A	Q14432	1141 aa		11.42	□□□□□ -0.58
SRRM1-221	ENST00000593639	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.42	□□□□□ -0.58
SRRM1-221	ENST00000593639	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.42	□□□□□ -0.58
SRRM1-221	ENST00000593639	ERICH6	Q7L0X2	663 aa		11.42	□□□□□ -0.58
SRRM1-221	ENST00000593639	GPR142	Q7Z601	462 aa		11.42	□□□□□ -0.58
SRRM1-221	ENST00000593639	SENP6	Q9GZR1	1112 aa	Predicted RBP	11.42	□□□□□ -0.58
SRRM1-221	ENST00000593639	AS3MT	Q9HBK9	375 aa		11.42	□□□□□ -0.58
SRRM1-221	ENST00000593639	TMOD4	Q9NZQ9	345 aa		11.42	□□□□□ -0.58
SRRM1-221	ENST00000593639	PTPRF	P10586	1907 aa		11.42	□□□□□ -0.58
SRRM1-221	ENST00000593639	DOCK1	Q14185	1865 aa		11.42	□□□□□ -0.58
SRRM1-221	ENST00000593639	PHIP	Q8WWQ0	1821 aa		11.42	□□□□□ -0.58
SRRM1-221	ENST00000593639	AK9	Q5TCS8	1911 aa		11.41	□□□□□ -0.58
SRRM1-221	ENST00000593639	ATN1	P54259	1190 aa	Predicted RBP	11.41	□□□□□ -0.58
SRRM1-221	ENST00000593639	ERVK-9	P63128	1117 aa		11.41	□□□□□ -0.58
SRRM1-221	ENST00000593639	ERVK-24	P63145	666 aa		11.41	□□□□□ -0.58
SRRM1-221	ENST00000593639	MAFA	Q8NHW3	353 aa	Predicted RBP	11.41	□□□□□ -0.58
SRRM1-221	ENST00000593639	SSH1	Q8WYL5	1049 aa		11.41	□□□□□ -0.58
SRRM1-221	ENST00000593639	APBA2	Q99767	749 aa		11.41	□□□□□ -0.58

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