RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 APPBP2Q92624 585 aa18.48■□□□□ 0.55
TRIM47-206ENST00000592942 MS4A4AQ96JQ5 239 aa18.48■□□□□ 0.55
TRIM47-206ENST00000592942 STRBPQ96SI9 672 aaKnown RBP18.48■□□□□ 0.55
TRIM47-206ENST00000592942 CRNKL1Q9BZJ0 848 aaKnown RBP18.48■□□□□ 0.55
TRIM47-206ENST00000592942 DCP1AQ9NPI6 582 aaPredicted RBP18.48■□□□□ 0.55
TRIM47-206ENST00000592942 SIPA1L1O43166 1804 aa18.48■□□□□ 0.55
TRIM47-206ENST00000592942 SPDYE5A6NIY4 337 aa18.47■□□□□ 0.55
TRIM47-206ENST00000592942 ZFYP08048 801 aaPredicted RBP18.47■□□□□ 0.55
TRIM47-206ENST00000592942 PLCD1P51178 756 aa18.47■□□□□ 0.55
TRIM47-206ENST00000592942 EVI5LQ96CN4 794 aa18.47■□□□□ 0.55
TRIM47-206ENST00000592942 SEC62Q99442 399 aaKnown RBP18.47■□□□□ 0.55
TRIM47-206ENST00000592942 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.47■□□□□ 0.55
TRIM47-206ENST00000592942 PRDM10Q9NQV6 1147 aa18.47■□□□□ 0.55
TRIM47-206ENST00000592942 TESPA1A2RU30 521 aaPredicted RBP18.46■□□□□ 0.55
TRIM47-206ENST00000592942 SLC4A8Q2Y0W8 1093 aa18.46■□□□□ 0.55
TRIM47-206ENST00000592942 ZMYM1Q5SVZ6 1142 aa18.46■□□□□ 0.55
TRIM47-206ENST00000592942 ERO1BQ86YB8 467 aa18.46■□□□□ 0.55
TRIM47-206ENST00000592942 REM2Q8IYK8 340 aaPredicted RBP18.46■□□□□ 0.55
TRIM47-206ENST00000592942 RNF186Q9NXI6 227 aa18.46■□□□□ 0.55
TRIM47-206ENST00000592942 HERC5Q9UII4 1024 aaKnown RBP18.46■□□□□ 0.55
TRIM47-206ENST00000592942 SMIM22K7EJ46 135 aa18.45■□□□□ 0.54
TRIM47-206ENST00000592942 M0R2C6 588 aa18.45■□□□□ 0.54
TRIM47-206ENST00000592942 IRF6O14896 467 aa18.45■□□□□ 0.54
TRIM47-206ENST00000592942 CTNND1O60716 968 aaKnown RBP18.45■□□□□ 0.54
TRIM47-206ENST00000592942 JAG1P78504 1218 aa18.45■□□□□ 0.54
TRIM47-206ENST00000592942 PTPN18Q99952 460 aa18.45■□□□□ 0.54
TRIM47-206ENST00000592942 FSD1Q9BTV5 496 aa18.45■□□□□ 0.54
TRIM47-206ENST00000592942 ATP8A2Q9NTI2 1148 aa18.45■□□□□ 0.54
TRIM47-206ENST00000592942 MYH1P12882 1939 aa18.45■□□□□ 0.54
TRIM47-206ENST00000592942 MANSC4A6NHS7 340 aaPredicted RBP18.44■□□□□ 0.54
TRIM47-206ENST00000592942 GSG1L2A8MUP6 293 aa18.44■□□□□ 0.54
TRIM47-206ENST00000592942 PPATQ06203 517 aa18.44■□□□□ 0.54
TRIM47-206ENST00000592942 GABPAQ06546 454 aa18.44■□□□□ 0.54
TRIM47-206ENST00000592942 SCYL3Q8IZE3 742 aa18.44■□□□□ 0.54
TRIM47-206ENST00000592942 AIDAQ96BJ3 306 aa18.44■□□□□ 0.54
TRIM47-206ENST00000592942 OTUD5Q96G74 571 aa18.44■□□□□ 0.54
TRIM47-206ENST00000592942 SLC4A4Q9Y6R1 1079 aa18.44■□□□□ 0.54
TRIM47-206ENST00000592942 GPAA1O43292 621 aa18.43■□□□□ 0.54
TRIM47-206ENST00000592942 CYP2D6P10635 497 aa18.43■□□□□ 0.54
TRIM47-206ENST00000592942 HSPA8P11142 646 aaKnown RBP18.43■□□□□ 0.54
TRIM47-206ENST00000592942 PTPRAP18433 802 aa18.43■□□□□ 0.54
TRIM47-206ENST00000592942 CAP2P40123 477 aa18.43■□□□□ 0.54
TRIM47-206ENST00000592942 CTCFP49711 727 aaPredicted RBP18.43■□□□□ 0.54
TRIM47-206ENST00000592942 INHBEP58166 350 aa18.43■□□□□ 0.54
TRIM47-206ENST00000592942 PPIL2Q13356 520 aa18.43■□□□□ 0.54
TRIM47-206ENST00000592942 EHD4Q9H223 541 aa18.43■□□□□ 0.54
TRIM47-206ENST00000592942 MCM9Q9NXL9 1143 aa18.43■□□□□ 0.54
TRIM47-206ENST00000592942 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.43■□□□□ 0.54
TRIM47-206ENST00000592942 TSKSQ9UJT2 592 aa18.43■□□□□ 0.54
TRIM47-206ENST00000592942 IGF2BP3O00425 579 aaKnown RBP eCLIP18.42■□□□□ 0.54
TRIM47-206ENST00000592942 SHROOM1Q2M3G4 852 aaPredicted RBP18.42■□□□□ 0.54
TRIM47-206ENST00000592942 LRRFIP1Q32MZ4 808 aaKnown RBP18.42■□□□□ 0.54
TRIM47-206ENST00000592942 TATDN1Q6P1N9 297 aa18.42■□□□□ 0.54
TRIM47-206ENST00000592942 TTC6Q86TZ1 520 aa18.42■□□□□ 0.54
TRIM47-206ENST00000592942 TICAM2Q86XR7 235 aa18.42■□□□□ 0.54
TRIM47-206ENST00000592942 IFNL1Q8IU54 200 aa18.42■□□□□ 0.54
TRIM47-206ENST00000592942 BRI3BPQ8WY22 251 aa18.42■□□□□ 0.54
TRIM47-206ENST00000592942 SERPINB13Q9UIV8 391 aa18.42■□□□□ 0.54
TRIM47-206ENST00000592942 KCNH4Q9UQ05 1017 aa18.42■□□□□ 0.54
TRIM47-206ENST00000592942 DDX60LQ5H9U9 1706 aaKnown RBP18.42■□□□□ 0.54
TRIM47-206ENST00000592942 LAMB1P07942 1786 aa18.42■□□□□ 0.54
TRIM47-206ENST00000592942 CYP2D7A0A087X1C5 515 aa18.41■□□□□ 0.54
TRIM47-206ENST00000592942 USP17L12C9JPN9 530 aa18.41■□□□□ 0.54
TRIM47-206ENST00000592942 USP17L21D6R901 530 aa18.41■□□□□ 0.54
TRIM47-206ENST00000592942 TRPA1O75762 1119 aa18.41■□□□□ 0.54
TRIM47-206ENST00000592942 POLR3DP05423 398 aaPredicted RBP18.41■□□□□ 0.54
TRIM47-206ENST00000592942 HLA-DOAP06340 250 aa18.41■□□□□ 0.54
TRIM47-206ENST00000592942 SREBF2Q12772 1141 aa18.41■□□□□ 0.54
TRIM47-206ENST00000592942 MOGSQ13724 837 aa18.41■□□□□ 0.54
TRIM47-206ENST00000592942 C12orf60Q5U649 245 aa18.41■□□□□ 0.54
TRIM47-206ENST00000592942 CCDC84Q86UT8 332 aaPredicted RBP18.41■□□□□ 0.54
TRIM47-206ENST00000592942 AFG3L2Q9Y4W6 797 aa18.41■□□□□ 0.54
TRIM47-206ENST00000592942 ZHX2Q9Y6X8 837 aa18.41■□□□□ 0.54
TRIM47-206ENST00000592942 TRIM6-TRIM34B2RNG4 842 aa18.4■□□□□ 0.54
TRIM47-206ENST00000592942 FOXP2O15409 715 aa18.4■□□□□ 0.54
TRIM47-206ENST00000592942 CA12O43570 354 aa18.4■□□□□ 0.54
TRIM47-206ENST00000592942 GSPT1P15170 499 aaKnown RBP18.4■□□□□ 0.54
TRIM47-206ENST00000592942 SHMT1P34896 483 aa18.4■□□□□ 0.54
TRIM47-206ENST00000592942 GTF2A2P52657 109 aa18.4■□□□□ 0.54
TRIM47-206ENST00000592942 LBX1P52954 281 aa18.4■□□□□ 0.54
TRIM47-206ENST00000592942 CTR9Q6PD62 1173 aa18.4■□□□□ 0.54
TRIM47-206ENST00000592942 CRACR2BQ8N4Y2 399 aaPredicted RBP18.4■□□□□ 0.54
TRIM47-206ENST00000592942 RILPL2Q969X0 211 aa18.4■□□□□ 0.54
TRIM47-206ENST00000592942 FAM227BQ96M60 508 aa18.4■□□□□ 0.54
TRIM47-206ENST00000592942 BEGAINQ9BUH8 593 aa18.4■□□□□ 0.54
TRIM47-206ENST00000592942 R3HDMLQ9H3Y0 253 aa18.4■□□□□ 0.54
TRIM47-206ENST00000592942 EPB41L4AQ9HCS5 686 aaPredicted RBP18.4■□□□□ 0.54
TRIM47-206ENST00000592942 SAGE1Q9NXZ1 904 aa18.4■□□□□ 0.54
TRIM47-206ENST00000592942 PATL2C9JE40 543 aaKnown RBP18.39■□□□□ 0.53
TRIM47-206ENST00000592942 SDSP20132 328 aa18.39■□□□□ 0.53
TRIM47-206ENST00000592942 GIMAP6Q6P9H5 292 aa18.39■□□□□ 0.53
TRIM47-206ENST00000592942 CCDC129Q6ZRS4 1044 aa18.39■□□□□ 0.53
TRIM47-206ENST00000592942 CENPQQ7L2Z9 268 aaPredicted RBP18.39■□□□□ 0.53
TRIM47-206ENST00000592942 DYNLL2Q96FJ2 89 aa18.39■□□□□ 0.53
TRIM47-206ENST00000592942 PICK1Q9NRD5 415 aa18.39■□□□□ 0.53
TRIM47-206ENST00000592942 BAZ2AQ9UIF9 1905 aaKnown RBP18.39■□□□□ 0.53
TRIM47-206ENST00000592942 PHIPQ8WWQ0 1821 aa18.38■□□□□ 0.53
TRIM47-206ENST00000592942 CCL15-CCL14A0A0B4J2E2 113 aa18.38■□□□□ 0.53
TRIM47-206ENST00000592942 A0A0D9SFI3 127 aa18.38■□□□□ 0.53
TRIM47-206ENST00000592942 CXCL11O14625 94 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms