RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 USP44Q9H0E7 712 aa12.64□□□□□ -0.39
SMCO4P1-201ENST00000592909 ASCC2Q9H1I8 757 aaPredicted RBP12.64□□□□□ -0.39
SMCO4P1-201ENST00000592909 FBXO3Q9UK99 471 aa12.64□□□□□ -0.39
SMCO4P1-201ENST00000592909 AK9Q5TCS8 1911 aa12.63□□□□□ -0.39
SMCO4P1-201ENST00000592909 HMGCS2P54868 508 aa12.63□□□□□ -0.39
SMCO4P1-201ENST00000592909 ATP2B3Q16720 1220 aa12.63□□□□□ -0.39
SMCO4P1-201ENST00000592909 LRRC26Q2I0M4 334 aa12.63□□□□□ -0.39
SMCO4P1-201ENST00000592909 LHX8Q68G74 356 aa12.63□□□□□ -0.39
SMCO4P1-201ENST00000592909 SOCS4Q8WXH5 440 aa12.63□□□□□ -0.39
SMCO4P1-201ENST00000592909 NUDT12Q9BQG2 462 aa12.63□□□□□ -0.39
SMCO4P1-201ENST00000592909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMCO4P1-201ENST00000592909 COL2A1P02458 1487 aaPredicted RBP12.63□□□□□ -0.39
SMCO4P1-201ENST00000592909 CIAO1O76071 339 aa12.62□□□□□ -0.39
SMCO4P1-201ENST00000592909 BTDP43251 543 aa12.62□□□□□ -0.39
SMCO4P1-201ENST00000592909 PHKA1P46020 1223 aa12.62□□□□□ -0.39
SMCO4P1-201ENST00000592909 CACNB2Q08289 660 aaPredicted RBP12.62□□□□□ -0.39
SMCO4P1-201ENST00000592909 PICALMQ13492 652 aa12.62□□□□□ -0.39
SMCO4P1-201ENST00000592909 PRDM6Q9NQX0 595 aa12.62□□□□□ -0.39
SMCO4P1-201ENST00000592909 CEP126Q9P2H0 1117 aa12.62□□□□□ -0.39
SMCO4P1-201ENST00000592909 SALL2Q9Y467 1007 aaPredicted RBP12.62□□□□□ -0.39
SMCO4P1-201ENST00000592909 UNC80Q8N2C7 3258 aa12.61□□□□□ -0.39
SMCO4P1-201ENST00000592909 PTPRFP10586 1907 aa12.61□□□□□ -0.39
SMCO4P1-201ENST00000592909 GPR75-ASB3A0A0A6YYF3 556 aa12.61□□□□□ -0.39
SMCO4P1-201ENST00000592909 USP17L5A8MUK1 530 aa12.61□□□□□ -0.39
SMCO4P1-201ENST00000592909 HOXA7P31268 230 aaPredicted RBP12.61□□□□□ -0.39
SMCO4P1-201ENST00000592909 CAP2P40123 477 aa12.61□□□□□ -0.39
SMCO4P1-201ENST00000592909 RHBDL3P58872 404 aa12.61□□□□□ -0.39
SMCO4P1-201ENST00000592909 DZIP1Q86YF9 867 aaKnown RBP12.61□□□□□ -0.39
SMCO4P1-201ENST00000592909 GPRC5AQ8NFJ5 357 aa12.61□□□□□ -0.39
SMCO4P1-201ENST00000592909 USP6NLQ92738 828 aa12.61□□□□□ -0.39
SMCO4P1-201ENST00000592909 LBHD1Q9BQE6 289 aaPredicted RBP12.61□□□□□ -0.39
SMCO4P1-201ENST00000592909 DDX60LQ5H9U9 1706 aaKnown RBP12.61□□□□□ -0.39
SMCO4P1-201ENST00000592909 MROH7-TTC4A0A0A0MT08 1334 aa12.61□□□□□ -0.39
SMCO4P1-201ENST00000592909 PDS5AQ29RF7 1337 aaKnown RBP12.61□□□□□ -0.39
SMCO4P1-201ENST00000592909 PHIPQ8WWQ0 1821 aa12.6□□□□□ -0.39
SMCO4P1-201ENST00000592909 TTC28Q96AY4 2481 aa12.6□□□□□ -0.39
SMCO4P1-201ENST00000592909 MAP4K4O95819 1239 aaPredicted RBP12.6□□□□□ -0.39
SMCO4P1-201ENST00000592909 ZKSCAN1P17029 563 aaPredicted RBP12.6□□□□□ -0.39
SMCO4P1-201ENST00000592909 MAPK4P31152 587 aa12.6□□□□□ -0.39
SMCO4P1-201ENST00000592909 IRX3P78415 501 aaPredicted RBP12.6□□□□□ -0.39
SMCO4P1-201ENST00000592909 ZNF697Q5TEC3 545 aa12.6□□□□□ -0.39
SMCO4P1-201ENST00000592909 SPTY2D1Q68D10 685 aaPredicted RBP12.6□□□□□ -0.39
SMCO4P1-201ENST00000592909 CCDC102BQ68D86 513 aa12.6□□□□□ -0.39
SMCO4P1-201ENST00000592909 MRPL50Q8N5N7 158 aaKnown RBP12.6□□□□□ -0.39
SMCO4P1-201ENST00000592909 FAM161BQ96MY7 647 aa12.6□□□□□ -0.39
SMCO4P1-201ENST00000592909 P2RX7Q99572 595 aaKnown RBP12.6□□□□□ -0.39
SMCO4P1-201ENST00000592909 WDR18Q9BV38 432 aa12.6□□□□□ -0.39
SMCO4P1-201ENST00000592909 AS3MTQ9HBK9 375 aa12.6□□□□□ -0.39
SMCO4P1-201ENST00000592909 TXNRD2Q9NNW7 524 aa12.6□□□□□ -0.39
SMCO4P1-201ENST00000592909 PTPRCP08575 1304 aa12.6□□□□□ -0.39
SMCO4P1-201ENST00000592909 FAM196BA6NMK8 535 aa12.59□□□□□ -0.39
SMCO4P1-201ENST00000592909 CCND3P30281 292 aaPredicted RBP12.59□□□□□ -0.39
SMCO4P1-201ENST00000592909 BACE1P56817 501 aa12.59□□□□□ -0.39
SMCO4P1-201ENST00000592909 RASGRF1Q13972 1273 aa12.59□□□□□ -0.39
SMCO4P1-201ENST00000592909 PDE3AQ14432 1141 aa12.59□□□□□ -0.39
SMCO4P1-201ENST00000592909 RRP1BQ14684 758 aaKnown RBP12.59□□□□□ -0.39
SMCO4P1-201ENST00000592909 CDX2Q99626 313 aaPredicted RBP12.59□□□□□ -0.39
SMCO4P1-201ENST00000592909 ABCF2Q9UG63 623 aa12.59□□□□□ -0.39
SMCO4P1-201ENST00000592909 DOCK2Q92608 1830 aa12.59□□□□□ -0.39
SMCO4P1-201ENST00000592909 DOCK1Q14185 1865 aa12.59□□□□□ -0.39
SMCO4P1-201ENST00000592909 ADORA1P30542 326 aa12.58□□□□□ -0.4
SMCO4P1-201ENST00000592909 IL15P40933 162 aaPredicted RBP12.58□□□□□ -0.4
SMCO4P1-201ENST00000592909 RGS2P41220 211 aa12.58□□□□□ -0.4
SMCO4P1-201ENST00000592909 HERVK_113P62684 666 aa12.58□□□□□ -0.4
SMCO4P1-201ENST00000592909 Q3C1V9 767 aa12.58□□□□□ -0.4
SMCO4P1-201ENST00000592909 MORN1Q5T089 497 aa12.58□□□□□ -0.4
SMCO4P1-201ENST00000592909 SIL1Q9H173 461 aa12.58□□□□□ -0.4
SMCO4P1-201ENST00000592909 SEMA6BQ9H3T3 888 aa12.58□□□□□ -0.4
SMCO4P1-201ENST00000592909 TMOD4Q9NZQ9 345 aa12.58□□□□□ -0.4
SMCO4P1-201ENST00000592909 RBPJLQ9UBG7 517 aa12.58□□□□□ -0.4
SMCO4P1-201ENST00000592909 HERC5Q9UII4 1024 aaKnown RBP12.58□□□□□ -0.4
SMCO4P1-201ENST00000592909 C19orf81C9J6K1 198 aa12.57□□□□□ -0.4
SMCO4P1-201ENST00000592909 PEX10O60683 326 aa12.57□□□□□ -0.4
SMCO4P1-201ENST00000592909 MECOMQ03112 1051 aa12.57□□□□□ -0.4
SMCO4P1-201ENST00000592909 MTMR2Q13614 643 aa12.57□□□□□ -0.4
SMCO4P1-201ENST00000592909 CCL14Q16627 93 aa12.57□□□□□ -0.4
SMCO4P1-201ENST00000592909 ERICH6Q7L0X2 663 aa12.57□□□□□ -0.4
SMCO4P1-201ENST00000592909 GPR142Q7Z601 462 aa12.57□□□□□ -0.4
SMCO4P1-201ENST00000592909 PLEKHH3Q7Z736 793 aa12.57□□□□□ -0.4
SMCO4P1-201ENST00000592909 MAFAQ8NHW3 353 aaPredicted RBP12.57□□□□□ -0.4
SMCO4P1-201ENST00000592909 ZNF384Q8TF68 577 aa12.57□□□□□ -0.4
SMCO4P1-201ENST00000592909 GTF3C2Q8WUA4 911 aaPredicted RBP12.57□□□□□ -0.4
SMCO4P1-201ENST00000592909 APBA2Q99767 749 aa12.57□□□□□ -0.4
SMCO4P1-201ENST00000592909 SENP6Q9GZR1 1112 aaPredicted RBP12.57□□□□□ -0.4
SMCO4P1-201ENST00000592909 LDHCP07864 332 aa12.56□□□□□ -0.4
SMCO4P1-201ENST00000592909 ASNSP08243 561 aa12.56□□□□□ -0.4
SMCO4P1-201ENST00000592909 ERVK-9P63128 1117 aa12.56□□□□□ -0.4
SMCO4P1-201ENST00000592909 ERVK-24P63145 666 aa12.56□□□□□ -0.4
SMCO4P1-201ENST00000592909 SYMPKQ92797 1274 aaKnown RBP12.56□□□□□ -0.4
SMCO4P1-201ENST00000592909 PORCNQ9H237 461 aa12.56□□□□□ -0.4
SMCO4P1-201ENST00000592909 PI4KBQ9UBF8 816 aa12.56□□□□□ -0.4
SMCO4P1-201ENST00000592909 VCANP13611 3396 aa12.56□□□□□ -0.4
SMCO4P1-201ENST00000592909 LOC285556D6RIA3 1793 aa12.56□□□□□ -0.4
SMCO4P1-201ENST00000592909 PLXNB2O15031 1838 aa12.55□□□□□ -0.4
SMCO4P1-201ENST00000592909 MSCO60682 206 aa12.55□□□□□ -0.4
SMCO4P1-201ENST00000592909 TIMM10P62072 90 aa12.55□□□□□ -0.4
SMCO4P1-201ENST00000592909 GSTO1P78417 241 aa12.55□□□□□ -0.4
SMCO4P1-201ENST00000592909 MAP2K5Q13163 448 aa12.55□□□□□ -0.4
SMCO4P1-201ENST00000592909 POTEEQ6S8J3 1075 aa12.55□□□□□ -0.4
SMCO4P1-201ENST00000592909 CCAR1Q8IX12 1150 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms