RNA–Protein interactions for RNA: ENST00000592804.1

PTBP1-218, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-218ENST00000592804 NOL9Q5SY16 702 aaKnown RBP23.49■■□□□ 1.35
PTBP1-218ENST00000592804 SDR42E1Q8WUS8 393 aa23.49■■□□□ 1.35
PTBP1-218ENST00000592804 PI4KBQ9UBF8 816 aa23.49■■□□□ 1.35
PTBP1-218ENST00000592804 SPDYE5A6NIY4 337 aa23.48■■□□□ 1.35
PTBP1-218ENST00000592804 PRKAB2O43741 272 aa23.48■■□□□ 1.35
PTBP1-218ENST00000592804 ZFYP08048 801 aaPredicted RBP23.48■■□□□ 1.35
PTBP1-218ENST00000592804 PDE4AP27815 886 aa23.48■■□□□ 1.35
PTBP1-218ENST00000592804 APPBP2Q92624 585 aa23.48■■□□□ 1.35
PTBP1-218ENST00000592804 OTUD5Q96G74 571 aa23.48■■□□□ 1.35
PTBP1-218ENST00000592804 BEGAINQ9BUH8 593 aa23.48■■□□□ 1.35
PTBP1-218ENST00000592804 OSBPL3Q9H4L5 887 aa23.48■■□□□ 1.35
PTBP1-218ENST00000592804 ERO1BQ86YB8 467 aa23.47■■□□□ 1.35
PTBP1-218ENST00000592804 REM2Q8IYK8 340 aaPredicted RBP23.47■■□□□ 1.35
PTBP1-218ENST00000592804 OSBP2Q969R2 916 aa23.47■■□□□ 1.35
PTBP1-218ENST00000592804 DNAJC18Q9H819 358 aa23.47■■□□□ 1.35
PTBP1-218ENST00000592804 HLA-DOAP06340 250 aa23.46■■□□□ 1.35
PTBP1-218ENST00000592804 TM4SF4P48230 202 aa23.46■■□□□ 1.35
PTBP1-218ENST00000592804 EVI5LQ96CN4 794 aa23.46■■□□□ 1.35
PTBP1-218ENST00000592804 DCP1AQ9NPI6 582 aaPredicted RBP23.46■■□□□ 1.35
PTBP1-218ENST00000592804 HERC5Q9UII4 1024 aaKnown RBP23.46■■□□□ 1.35
PTBP1-218ENST00000592804 MANSC4A6NHS7 340 aaPredicted RBP23.45■■□□□ 1.34
PTBP1-218ENST00000592804 M0R2C6 588 aa23.45■■□□□ 1.34
PTBP1-218ENST00000592804 CENPBP07199 599 aaPredicted RBP23.45■■□□□ 1.34
PTBP1-218ENST00000592804 RRP1BQ14684 758 aaKnown RBP23.45■■□□□ 1.34
PTBP1-218ENST00000592804 LRRFIP1Q32MZ4 808 aaKnown RBP23.45■■□□□ 1.34
PTBP1-218ENST00000592804 METTL16Q86W50 562 aaKnown RBP23.45■■□□□ 1.34
PTBP1-218ENST00000592804 SCYL3Q8IZE3 742 aa23.45■■□□□ 1.34
PTBP1-218ENST00000592804 TSKSQ9UJT2 592 aa23.45■■□□□ 1.34
PTBP1-218ENST00000592804 CTNND1O60716 968 aaKnown RBP23.44■■□□□ 1.34
PTBP1-218ENST00000592804 HSPA8P11142 646 aaKnown RBP23.44■■□□□ 1.34
PTBP1-218ENST00000592804 EVX2Q03828 476 aa23.44■■□□□ 1.34
PTBP1-218ENST00000592804 SREBF2Q12772 1141 aa23.44■■□□□ 1.34
PTBP1-218ENST00000592804 FOXP4Q8IVH2 680 aaPredicted RBP23.44■■□□□ 1.34
PTBP1-218ENST00000592804 CRACR2BQ8N4Y2 399 aaPredicted RBP23.44■■□□□ 1.34
PTBP1-218ENST00000592804 STRBPQ96SI9 672 aaKnown RBP23.44■■□□□ 1.34
PTBP1-218ENST00000592804 SEC62Q99442 399 aaKnown RBP23.44■■□□□ 1.34
PTBP1-218ENST00000592804 RNF186Q9NXI6 227 aa23.44■■□□□ 1.34
PTBP1-218ENST00000592804 MCM9Q9NXL9 1143 aa23.44■■□□□ 1.34
PTBP1-218ENST00000592804 SLC4A4Q9Y6R1 1079 aa23.44■■□□□ 1.34
PTBP1-218ENST00000592804 TRIM6-TRIM34B2RNG4 842 aa23.43■■□□□ 1.34
PTBP1-218ENST00000592804 POLR3DP05423 398 aaPredicted RBP23.43■■□□□ 1.34
PTBP1-218ENST00000592804 CTCFP49711 727 aaPredicted RBP23.43■■□□□ 1.34
PTBP1-218ENST00000592804 PLCD1P51178 756 aa23.43■■□□□ 1.34
PTBP1-218ENST00000592804 PPATQ06203 517 aa23.43■■□□□ 1.34
PTBP1-218ENST00000592804 PPIL2Q13356 520 aa23.43■■□□□ 1.34
PTBP1-218ENST00000592804 TTC6Q86TZ1 520 aa23.43■■□□□ 1.34
PTBP1-218ENST00000592804 MS4A4AQ96JQ5 239 aa23.43■■□□□ 1.34
PTBP1-218ENST00000592804 ATP8A2Q9NTI2 1148 aa23.43■■□□□ 1.34
PTBP1-218ENST00000592804 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.43■■□□□ 1.34
PTBP1-218ENST00000592804 LOC285556D6RIA3 1793 aa23.42■■□□□ 1.34
PTBP1-218ENST00000592804 IRF6O14896 467 aa23.42■■□□□ 1.34
PTBP1-218ENST00000592804 GPAA1O43292 621 aa23.42■■□□□ 1.34
PTBP1-218ENST00000592804 CYP2D6P10635 497 aa23.42■■□□□ 1.34
PTBP1-218ENST00000592804 ZMYM1Q5SVZ6 1142 aa23.42■■□□□ 1.34
PTBP1-218ENST00000592804 RILPL2Q969X0 211 aa23.42■■□□□ 1.34
PTBP1-218ENST00000592804 TRIM34Q9BYJ4 488 aa23.42■■□□□ 1.34
PTBP1-218ENST00000592804 EHD4Q9H223 541 aa23.42■■□□□ 1.34
PTBP1-218ENST00000592804 IGF2BP3O00425 579 aaKnown RBP eCLIP23.41■■□□□ 1.34
PTBP1-218ENST00000592804 CA12O43570 354 aa23.41■■□□□ 1.34
PTBP1-218ENST00000592804 TRPA1O75762 1119 aa23.41■■□□□ 1.34
PTBP1-218ENST00000592804 PTPRAP18433 802 aa23.41■■□□□ 1.34
PTBP1-218ENST00000592804 PICK1Q9NRD5 415 aa23.41■■□□□ 1.34
PTBP1-218ENST00000592804 SERPINB13Q9UIV8 391 aa23.41■■□□□ 1.34
PTBP1-218ENST00000592804 TESPA1A2RU30 521 aaPredicted RBP23.4■■□□□ 1.34
PTBP1-218ENST00000592804 CAP2P40123 477 aa23.4■■□□□ 1.34
PTBP1-218ENST00000592804 GTF2A2P52657 109 aa23.4■■□□□ 1.34
PTBP1-218ENST00000592804 LBX1P52954 281 aa23.4■■□□□ 1.34
PTBP1-218ENST00000592804 INHBEP58166 350 aa23.4■■□□□ 1.34
PTBP1-218ENST00000592804 CCDC84Q86UT8 332 aaPredicted RBP23.4■■□□□ 1.34
PTBP1-218ENST00000592804 IFNL1Q8IU54 200 aa23.4■■□□□ 1.34
PTBP1-218ENST00000592804 SAGE1Q9NXZ1 904 aa23.4■■□□□ 1.34
PTBP1-218ENST00000592804 CCL15-CCL14A0A0B4J2E2 113 aa23.39■■□□□ 1.33
PTBP1-218ENST00000592804 GDF11O95390 407 aa23.39■■□□□ 1.33
PTBP1-218ENST00000592804 NEFLP07196 543 aa23.39■■□□□ 1.33
PTBP1-218ENST00000592804 CCL15Q16663 113 aa23.39■■□□□ 1.33
PTBP1-218ENST00000592804 SHROOM1Q2M3G4 852 aaPredicted RBP23.39■■□□□ 1.33
PTBP1-218ENST00000592804 BRI3BPQ8WY22 251 aa23.39■■□□□ 1.33
PTBP1-218ENST00000592804 PTPN18Q99952 460 aa23.39■■□□□ 1.33
PTBP1-218ENST00000592804 KCNH4Q9UQ05 1017 aa23.39■■□□□ 1.33
PTBP1-218ENST00000592804 CYP2D7A0A087X1C5 515 aa23.38■■□□□ 1.33
PTBP1-218ENST00000592804 GSG1L2A8MUP6 293 aa23.38■■□□□ 1.33
PTBP1-218ENST00000592804 SMIM22K7EJ46 135 aa23.38■■□□□ 1.33
PTBP1-218ENST00000592804 JAG1P78504 1218 aa23.38■■□□□ 1.33
PTBP1-218ENST00000592804 SNAPC2Q13487 334 aa23.38■■□□□ 1.33
PTBP1-218ENST00000592804 ZHX2Q9Y6X8 837 aa23.38■■□□□ 1.33
PTBP1-218ENST00000592804 GABPAQ06546 454 aa23.37■■□□□ 1.33
PTBP1-218ENST00000592804 TTC22Q5TAA0 569 aa23.37■■□□□ 1.33
PTBP1-218ENST00000592804 TATDN1Q6P1N9 297 aa23.37■■□□□ 1.33
PTBP1-218ENST00000592804 CCDC129Q6ZRS4 1044 aa23.37■■□□□ 1.33
PTBP1-218ENST00000592804 CENPQQ7L2Z9 268 aaPredicted RBP23.37■■□□□ 1.33
PTBP1-218ENST00000592804 EPB41L4AQ9HCS5 686 aaPredicted RBP23.37■■□□□ 1.33
PTBP1-218ENST00000592804 AFG3L2Q9Y4W6 797 aa23.37■■□□□ 1.33
PTBP1-218ENST00000592804 GREB1LQ9C091 1923 aaPredicted RBP23.37■■□□□ 1.33
PTBP1-218ENST00000592804 USP17L12C9JPN9 530 aa23.36■■□□□ 1.33
PTBP1-218ENST00000592804 USP17L21D6R901 530 aa23.36■■□□□ 1.33
PTBP1-218ENST00000592804 GNAT2P19087 354 aa23.36■■□□□ 1.33
PTBP1-218ENST00000592804 SHMT1P34896 483 aa23.36■■□□□ 1.33
PTBP1-218ENST00000592804 C12orf60Q5U649 245 aa23.36■■□□□ 1.33
PTBP1-218ENST00000592804 CTR9Q6PD62 1173 aa23.36■■□□□ 1.33
PTBP1-218ENST00000592804 DDRGK1Q96HY6 314 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms