RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 SNCAIPQ9Y6H5 919 aa11.73□□□□□ -0.53
BRCA1-226ENST00000591534 ECM29Q5VYK3 1845 aa11.72□□□□□ -0.53
BRCA1-226ENST00000591534 RPAP1Q9BWH6 1393 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-226ENST00000591534 FGFR2P21802 821 aa11.72□□□□□ -0.53
BRCA1-226ENST00000591534 METTL3Q86U44 580 aaKnown RBP11.72□□□□□ -0.53
BRCA1-226ENST00000591534 SLF2Q8IX21 1173 aa11.72□□□□□ -0.53
BRCA1-226ENST00000591534 ZGPATQ8N5A5 531 aaKnown RBP11.72□□□□□ -0.53
BRCA1-226ENST00000591534 ZKSCAN4Q969J2 545 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-226ENST00000591534 DAXXQ9UER7 740 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-226ENST00000591534 FAM198AQ9UFP1 575 aa11.72□□□□□ -0.53
BRCA1-226ENST00000591534 ADGRG1Q9Y653 693 aa11.72□□□□□ -0.53
BRCA1-226ENST00000591534 BTBD19C9JJ37 291 aa11.71□□□□□ -0.53
BRCA1-226ENST00000591534 CIAO1O76071 339 aa11.71□□□□□ -0.53
BRCA1-226ENST00000591534 LDHBP07195 334 aaKnown RBP11.71□□□□□ -0.53
BRCA1-226ENST00000591534 CT47B1P0C2W7 299 aaPredicted RBP11.71□□□□□ -0.53
BRCA1-226ENST00000591534 UBTFL1P0CB47 393 aaPredicted RBP11.71□□□□□ -0.53
BRCA1-226ENST00000591534 EN2P19622 333 aaPredicted RBP11.71□□□□□ -0.53
BRCA1-226ENST00000591534 PRSS12P56730 875 aa11.71□□□□□ -0.53
BRCA1-226ENST00000591534 LACTBP83111 547 aaPredicted RBP11.71□□□□□ -0.53
BRCA1-226ENST00000591534 GRIK5Q16478 980 aa11.71□□□□□ -0.53
BRCA1-226ENST00000591534 ANKRD23Q86SG2 305 aa11.71□□□□□ -0.53
BRCA1-226ENST00000591534 TTC13Q8NBP0 860 aa11.71□□□□□ -0.53
BRCA1-226ENST00000591534 KLHDC4Q8TBB5 520 aa11.71□□□□□ -0.53
BRCA1-226ENST00000591534 SSH1Q8WYL5 1049 aa11.71□□□□□ -0.53
BRCA1-226ENST00000591534 DENND2AQ9ULE3 1009 aa11.71□□□□□ -0.53
BRCA1-226ENST00000591534 PTCH2Q9Y6C5 1203 aa11.71□□□□□ -0.53
BRCA1-226ENST00000591534 SNPHO15079 494 aa11.7□□□□□ -0.54
BRCA1-226ENST00000591534 IL15P40933 162 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-226ENST00000591534 SLFN5Q08AF3 891 aa11.7□□□□□ -0.54
BRCA1-226ENST00000591534 ATP2B3Q16720 1220 aa11.7□□□□□ -0.54
BRCA1-226ENST00000591534 PPP4R3BQ5MIZ7 849 aa11.7□□□□□ -0.54
BRCA1-226ENST00000591534 MIGA2Q7L4E1 593 aa11.7□□□□□ -0.54
BRCA1-226ENST00000591534 NKX2-3Q8TAU0 364 aa11.7□□□□□ -0.54
BRCA1-226ENST00000591534 GPCPD1Q9NPB8 672 aa11.7□□□□□ -0.54
BRCA1-226ENST00000591534 SMC4Q9NTJ3 1288 aa11.7□□□□□ -0.54
BRCA1-226ENST00000591534 HTTP42858 3142 aa11.69□□□□□ -0.54
BRCA1-226ENST00000591534 OATP04181 439 aa11.69□□□□□ -0.54
BRCA1-226ENST00000591534 HOXB1P14653 301 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-226ENST00000591534 SSTR3P32745 418 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-226ENST00000591534 CLCN1P35523 988 aa11.69□□□□□ -0.54
BRCA1-226ENST00000591534 HABP4Q5JVS0 413 aaKnown RBP11.69□□□□□ -0.54
BRCA1-226ENST00000591534 SPTY2D1Q68D10 685 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-226ENST00000591534 PXYLP1Q8TE99 480 aa11.69□□□□□ -0.54
BRCA1-226ENST00000591534 PARK7Q99497 189 aaKnown RBP11.69□□□□□ -0.54
BRCA1-226ENST00000591534 API5Q9BZZ5 524 aaKnown RBP11.69□□□□□ -0.54
BRCA1-226ENST00000591534 PICK1Q9NRD5 415 aa11.69□□□□□ -0.54
BRCA1-226ENST00000591534 USP40Q9NVE5 1235 aa11.69□□□□□ -0.54
BRCA1-226ENST00000591534 DAGLAQ9Y4D2 1042 aa11.69□□□□□ -0.54
BRCA1-226ENST00000591534 A0A1B0GUL6 1792 aa11.69□□□□□ -0.54
BRCA1-226ENST00000591534 SALL1Q9NSC2 1324 aa11.68□□□□□ -0.54
BRCA1-226ENST00000591534 PDHXO00330 501 aa11.68□□□□□ -0.54
BRCA1-226ENST00000591534 CXCL11O14625 94 aa11.68□□□□□ -0.54
BRCA1-226ENST00000591534 FMNL1O95466 1100 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-226ENST00000591534 RFX5P48382 616 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-226ENST00000591534 TCP10Q12799 353 aa11.68□□□□□ -0.54
BRCA1-226ENST00000591534 NOL9Q5SY16 702 aaKnown RBP11.68□□□□□ -0.54
BRCA1-226ENST00000591534 CDC42EP5Q6NZY7 148 aa11.68□□□□□ -0.54
BRCA1-226ENST00000591534 C17orf99Q6UX52 265 aa11.68□□□□□ -0.54
BRCA1-226ENST00000591534 ERICH6Q7L0X2 663 aa11.68□□□□□ -0.54
BRCA1-226ENST00000591534 FASTKD5Q7L8L6 764 aaKnown RBP11.68□□□□□ -0.54
BRCA1-226ENST00000591534 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-226ENST00000591534 RAET1EQ8TD07 263 aa11.68□□□□□ -0.54
BRCA1-226ENST00000591534 TRIM47Q96LD4 638 aa11.68□□□□□ -0.54
BRCA1-226ENST00000591534 ZNF112Q9UJU3 913 aa11.68□□□□□ -0.54
BRCA1-226ENST00000591534 KCNH4Q9UQ05 1017 aa11.68□□□□□ -0.54
BRCA1-226ENST00000591534 C3orf80F5H4A9 247 aa11.67□□□□□ -0.54
BRCA1-226ENST00000591534 ENTPD3O75355 529 aa11.67□□□□□ -0.54
BRCA1-226ENST00000591534 CAPN2P17655 700 aa11.67□□□□□ -0.54
BRCA1-226ENST00000591534 INPP5BP32019 993 aa11.67□□□□□ -0.54
BRCA1-226ENST00000591534 PSMC4P43686 418 aa11.67□□□□□ -0.54
BRCA1-226ENST00000591534 ATG9AQ7Z3C6 839 aa11.67□□□□□ -0.54
BRCA1-226ENST00000591534 DZIP1Q86YF9 867 aaKnown RBP11.67□□□□□ -0.54
BRCA1-226ENST00000591534 ZSCAN29Q8IWY8 852 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-226ENST00000591534 TRMT2AQ8IZ69 625 aaKnown RBP11.67□□□□□ -0.54
BRCA1-226ENST00000591534 SIL1Q9H173 461 aa11.67□□□□□ -0.54
BRCA1-226ENST00000591534 SRRDQ9UH36 339 aa11.67□□□□□ -0.54
BRCA1-226ENST00000591534 AKAP2Q9Y2D5 859 aa11.67□□□□□ -0.54
BRCA1-226ENST00000591534 LRRFIP2Q9Y608 721 aaKnown RBP11.67□□□□□ -0.54
BRCA1-226ENST00000591534 LAMB1P07942 1786 aa11.67□□□□□ -0.54
BRCA1-226ENST00000591534 ARAP2Q8WZ64 1704 aa11.66□□□□□ -0.54
BRCA1-226ENST00000591534 CENPFP49454 3210 aa11.66□□□□□ -0.54
BRCA1-226ENST00000591534 PRDX5P30044 214 aa11.66□□□□□ -0.54
BRCA1-226ENST00000591534 FCGRTP55899 365 aa11.66□□□□□ -0.54
BRCA1-226ENST00000591534 UBXN2AP68543 259 aa11.66□□□□□ -0.54
BRCA1-226ENST00000591534 DIXDC1Q155Q3 683 aa11.66□□□□□ -0.54
BRCA1-226ENST00000591534 SH3TC2Q8TF17 1288 aa11.66□□□□□ -0.54
BRCA1-226ENST00000591534 BIN2Q9UBW5 565 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-226ENST00000591534 CPA4Q9UI42 421 aa11.66□□□□□ -0.54
BRCA1-226ENST00000591534 MAP4K4O95819 1239 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-226ENST00000591534 MYCP01106 439 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-226ENST00000591534 GNAI3P08754 354 aa11.65□□□□□ -0.54
BRCA1-226ENST00000591534 GRK4P32298 578 aa11.65□□□□□ -0.54
BRCA1-226ENST00000591534 NFIAQ12857 509 aa11.65□□□□□ -0.54
BRCA1-226ENST00000591534 MVPQ14764 893 aaKnown RBP11.65□□□□□ -0.54
BRCA1-226ENST00000591534 SCYL3Q8IZE3 742 aa11.65□□□□□ -0.54
BRCA1-226ENST00000591534 HTATIP2Q9BUP3 242 aa11.65□□□□□ -0.54
BRCA1-226ENST00000591534 IDI2Q9BXS1 227 aa11.65□□□□□ -0.54
BRCA1-226ENST00000591534 ARHGAP39Q9C0H5 1083 aa11.65□□□□□ -0.54
BRCA1-226ENST00000591534 COPRSQ9NQ92 184 aa11.65□□□□□ -0.54
BRCA1-226ENST00000591534 NOB1Q9ULX3 412 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms