RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 CDK5RAP2Q96SN8 1893 aa21.85■■□□□ 1.09
CROCCP3-205ENST00000591316 ZNF213O14771 459 aa21.85■■□□□ 1.09
CROCCP3-205ENST00000591316 CTDSPL2Q05D32 466 aa21.85■■□□□ 1.09
CROCCP3-205ENST00000591316 PPARAQ07869 468 aa21.85■■□□□ 1.09
CROCCP3-205ENST00000591316 C8orf34Q49A92 452 aa21.85■■□□□ 1.09
CROCCP3-205ENST00000591316 CTNNA3Q9UI47 895 aa21.85■■□□□ 1.09
CROCCP3-205ENST00000591316 ANGEL1Q9UNK9 670 aaKnown RBP21.85■■□□□ 1.09
CROCCP3-205ENST00000591316 RBM8AQ9Y5S9 174 aaKnown RBP21.85■■□□□ 1.09
CROCCP3-205ENST00000591316 PASKQ96RG2 1323 aa21.84■■□□□ 1.09
CROCCP3-205ENST00000591316 USP2O75604 605 aaPredicted RBP21.84■■□□□ 1.09
CROCCP3-205ENST00000591316 REC8O95072 547 aa21.84■■□□□ 1.09
CROCCP3-205ENST00000591316 DCAF15Q66K64 600 aa21.84■■□□□ 1.09
CROCCP3-205ENST00000591316 U3KPZ7 1027 aaPredicted RBP21.84■■□□□ 1.09
CROCCP3-205ENST00000591316 BAZ2AQ9UIF9 1905 aaKnown RBP21.84■■□□□ 1.09
CROCCP3-205ENST00000591316 SEC24BO95487 1268 aa21.83■■□□□ 1.09
CROCCP3-205ENST00000591316 C2orf69Q8N8R5 385 aa21.83■■□□□ 1.09
CROCCP3-205ENST00000591316 SLC44A5Q8NCS7 719 aa21.83■■□□□ 1.09
CROCCP3-205ENST00000591316 INCENPQ9NQS7 918 aa21.83■■□□□ 1.09
CROCCP3-205ENST00000591316 UBE2Q2LH0YL09 131 aa21.82■■□□□ 1.08
CROCCP3-205ENST00000591316 IMMTQ16891 758 aaKnown RBP21.82■■□□□ 1.08
CROCCP3-205ENST00000591316 ZNF341Q9BYN7 854 aa21.82■■□□□ 1.08
CROCCP3-205ENST00000591316 GBA2Q9HCG7 927 aaPredicted RBP21.82■■□□□ 1.08
CROCCP3-205ENST00000591316 HERC5Q9UII4 1024 aaKnown RBP21.82■■□□□ 1.08
CROCCP3-205ENST00000591316 MYH1P12882 1939 aa21.82■■□□□ 1.08
CROCCP3-205ENST00000591316 FOCADQ5VW36 1801 aa21.82■■□□□ 1.08
CROCCP3-205ENST00000591316 TBC1D12O60347 775 aa21.82■■□□□ 1.08
CROCCP3-205ENST00000591316 ARMC9Q7Z3E5 817 aa21.82■■□□□ 1.08
CROCCP3-205ENST00000591316 EHD4Q9H223 541 aa21.82■■□□□ 1.08
CROCCP3-205ENST00000591316 DNAJC18Q9H819 358 aa21.82■■□□□ 1.08
CROCCP3-205ENST00000591316 COL2A1P02458 1487 aaPredicted RBP21.81■■□□□ 1.08
CROCCP3-205ENST00000591316 SLC3A2P08195 630 aaKnown RBP21.81■■□□□ 1.08
CROCCP3-205ENST00000591316 CDK8P49336 464 aa21.81■■□□□ 1.08
CROCCP3-205ENST00000591316 MAP3K10Q02779 954 aa21.81■■□□□ 1.08
CROCCP3-205ENST00000591316 WRNIP1Q96S55 665 aa21.81■■□□□ 1.08
CROCCP3-205ENST00000591316 MKNK2Q9HBH9 465 aa21.81■■□□□ 1.08
CROCCP3-205ENST00000591316 NAV1Q8NEY1 1877 aa21.8■■□□□ 1.08
CROCCP3-205ENST00000591316 SSC5DA1L4H1 1573 aa21.8■■□□□ 1.08
CROCCP3-205ENST00000591316 PRDM1O75626 825 aa21.8■■□□□ 1.08
CROCCP3-205ENST00000591316 IREB2P48200 963 aaKnown RBP21.8■■□□□ 1.08
CROCCP3-205ENST00000591316 GABPAQ06546 454 aa21.8■■□□□ 1.08
CROCCP3-205ENST00000591316 METTL16Q86W50 562 aaKnown RBP21.8■■□□□ 1.08
CROCCP3-205ENST00000591316 KLRG1Q96E93 195 aa21.8■■□□□ 1.08
CROCCP3-205ENST00000591316 TOMM22Q9NS69 142 aa21.8■■□□□ 1.08
CROCCP3-205ENST00000591316 ZMYM6O95789 1325 aa21.8■■□□□ 1.08
CROCCP3-205ENST00000591316 CYP21A2P08686 494 aa21.79■■□□□ 1.08
CROCCP3-205ENST00000591316 C16orf86Q6ZW13 317 aa21.79■■□□□ 1.08
CROCCP3-205ENST00000591316 ZKSCAN4Q969J2 545 aaPredicted RBP21.79■■□□□ 1.08
CROCCP3-205ENST00000591316 TMEM88BA6NKF7 163 aa21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 PHF20L1A8MW92 1017 aa21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 INPP5BP32019 993 aa21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 SHMT1P34896 483 aa21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 PDE4BQ07343 736 aa21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 RRP1BQ14684 758 aaKnown RBP21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 NECTIN1Q15223 517 aa21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 CERKLQ49MI3 558 aaPredicted RBP21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 USP26Q9BXU7 913 aa21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 SWAP70Q9UH65 585 aa21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 ANAPC4Q9UJX5 808 aa21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 TACC3Q9Y6A5 838 aa21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 MAP3K9P80192 1104 aa21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 RRP12Q5JTH9 1297 aaKnown RBP21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 CREB3L3Q68CJ9 461 aa21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 MFSD6Q6ZSS7 791 aa21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 ZNF444Q8N0Y2 327 aaPredicted RBP21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 NBPF3Q9H094 633 aa21.78■■□□□ 1.08
CROCCP3-205ENST00000591316 SLC27A2O14975 620 aa21.77■■□□□ 1.08
CROCCP3-205ENST00000591316 GDF11O95390 407 aa21.77■■□□□ 1.08
CROCCP3-205ENST00000591316 AKNAD1Q5T1N1 836 aa21.77■■□□□ 1.08
CROCCP3-205ENST00000591316 TATDN1Q6P1N9 297 aa21.77■■□□□ 1.08
CROCCP3-205ENST00000591316 TBC1D10CQ8IV04 446 aa21.77■■□□□ 1.08
CROCCP3-205ENST00000591316 ZNF112Q9UJU3 913 aa21.77■■□□□ 1.08
CROCCP3-205ENST00000591316 ABT1Q9ULW3 272 aaKnown RBP21.77■■□□□ 1.08
CROCCP3-205ENST00000591316 TAF6LQ9Y6J9 622 aa21.77■■□□□ 1.08
CROCCP3-205ENST00000591316 MPHOSPH10O00566 681 aaKnown RBP21.76■■□□□ 1.07
CROCCP3-205ENST00000591316 APLP1P51693 650 aa21.76■■□□□ 1.07
CROCCP3-205ENST00000591316 HUNKP57058 714 aa21.76■■□□□ 1.07
CROCCP3-205ENST00000591316 FKBP1BP68106 108 aa21.76■■□□□ 1.07
CROCCP3-205ENST00000591316 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.76■■□□□ 1.07
CROCCP3-205ENST00000591316 ZNF287Q9HBT7 754 aa21.76■■□□□ 1.07
CROCCP3-205ENST00000591316 EIF5BO60841 1220 aaKnown RBP21.75■■□□□ 1.07
CROCCP3-205ENST00000591316 MAP3K11Q16584 847 aa21.75■■□□□ 1.07
CROCCP3-205ENST00000591316 SHROOM1Q2M3G4 852 aaPredicted RBP21.75■■□□□ 1.07
CROCCP3-205ENST00000591316 RNF20Q5VTR2 975 aa21.75■■□□□ 1.07
CROCCP3-205ENST00000591316 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.75■■□□□ 1.07
CROCCP3-205ENST00000591316 ANKRD13AQ8IZ07 590 aa21.75■■□□□ 1.07
CROCCP3-205ENST00000591316 CLMNQ96JQ2 1002 aa21.75■■□□□ 1.07
CROCCP3-205ENST00000591316 CSADQ9Y600 493 aa21.75■■□□□ 1.07
CROCCP3-205ENST00000591316 RANBP6O60518 1105 aaKnown RBP21.74■■□□□ 1.07
CROCCP3-205ENST00000591316 CTNND1O60716 968 aaKnown RBP21.74■■□□□ 1.07
CROCCP3-205ENST00000591316 CAP2P40123 477 aa21.74■■□□□ 1.07
CROCCP3-205ENST00000591316 C1QTNF8P60827 252 aa21.74■■□□□ 1.07
CROCCP3-205ENST00000591316 JAG1P78504 1218 aa21.74■■□□□ 1.07
CROCCP3-205ENST00000591316 DDX60LQ5H9U9 1706 aaKnown RBP21.74■■□□□ 1.07
CROCCP3-205ENST00000591316 FAM47AQ5JRC9 791 aa21.74■■□□□ 1.07
CROCCP3-205ENST00000591316 RNF41Q9H4P4 317 aaPredicted RBP21.74■■□□□ 1.07
CROCCP3-205ENST00000591316 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.74■■□□□ 1.07
CROCCP3-205ENST00000591316 AKR1B1P15121 316 aa21.74■■□□□ 1.07
CROCCP3-205ENST00000591316 RASA1P20936 1047 aa21.74■■□□□ 1.07
CROCCP3-205ENST00000591316 VGLL4Q14135 290 aa21.74■■□□□ 1.07
CROCCP3-205ENST00000591316 ABCB5Q2M3G0 1257 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms