RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 NF2P35240 595 aa13.79□□□□□ -0.2
SMAD4-211ENST00000590499 MAP2K1Q02750 393 aaPredicted RBP13.79□□□□□ -0.2
SMAD4-211ENST00000590499 NOGQ13253 232 aa13.79□□□□□ -0.2
SMAD4-211ENST00000590499 TNFAIP1Q13829 316 aa13.79□□□□□ -0.2
SMAD4-211ENST00000590499 DIXDC1Q155Q3 683 aa13.79□□□□□ -0.2
SMAD4-211ENST00000590499 TEPSINQ96N21 525 aa13.79□□□□□ -0.2
SMAD4-211ENST00000590499 ZIC5Q96T25 663 aa13.79□□□□□ -0.2
SMAD4-211ENST00000590499 DBNDD2Q9BQY9 259 aa13.79□□□□□ -0.2
SMAD4-211ENST00000590499 CHMP4BQ9H444 224 aaKnown RBP13.79□□□□□ -0.2
SMAD4-211ENST00000590499 HMG20BQ9P0W2 317 aa13.79□□□□□ -0.2
SMAD4-211ENST00000590499 EXOC6BQ9Y2D4 811 aa13.79□□□□□ -0.2
SMAD4-211ENST00000590499 DAGLAQ9Y4D2 1042 aa13.79□□□□□ -0.2
SMAD4-211ENST00000590499 LAMB1P07942 1786 aa13.78□□□□□ -0.2
SMAD4-211ENST00000590499 MYO5AQ9Y4I1 1855 aaKnown RBP13.78□□□□□ -0.2
SMAD4-211ENST00000590499 UBE2Q2LH0YL09 131 aa13.78□□□□□ -0.2
SMAD4-211ENST00000590499 MCAMP43121 646 aa13.78□□□□□ -0.2
SMAD4-211ENST00000590499 ZNF157P51786 506 aaPredicted RBP13.78□□□□□ -0.2
SMAD4-211ENST00000590499 MAP3K11Q16584 847 aa13.78□□□□□ -0.2
SMAD4-211ENST00000590499 LDLRAD1Q5T700 205 aa13.78□□□□□ -0.2
SMAD4-211ENST00000590499 NBPF12Q5TAG4 269 aaPredicted RBP13.78□□□□□ -0.2
SMAD4-211ENST00000590499 FKBP1CQ5VVH2 108 aa13.78□□□□□ -0.2
SMAD4-211ENST00000590499 PI16Q6UXB8 463 aa13.78□□□□□ -0.2
SMAD4-211ENST00000590499 RASAL3Q86YV0 1011 aa13.78□□□□□ -0.2
SMAD4-211ENST00000590499 ZGPATQ8N5A5 531 aaKnown RBP13.78□□□□□ -0.2
SMAD4-211ENST00000590499 SPATA5Q8NB90 893 aa13.78□□□□□ -0.2
SMAD4-211ENST00000590499 CCDC102AQ96A19 550 aa13.78□□□□□ -0.2
SMAD4-211ENST00000590499 EAF2Q96CJ1 260 aaPredicted RBP13.78□□□□□ -0.2
SMAD4-211ENST00000590499 YTHDC1Q96MU7 727 aaKnown RBP13.78□□□□□ -0.2
SMAD4-211ENST00000590499 DBNLQ9UJU6 430 aaKnown RBP13.78□□□□□ -0.2
SMAD4-211ENST00000590499 GAKO14976 1311 aa13.78□□□□□ -0.2
SMAD4-211ENST00000590499 SMAPO00193 183 aa13.77□□□□□ -0.21
SMAD4-211ENST00000590499 UQCRFS1P1P0C7P4 283 aa13.77□□□□□ -0.21
SMAD4-211ENST00000590499 CACNB3P54284 484 aa13.77□□□□□ -0.21
SMAD4-211ENST00000590499 GORABQ5T7V8 394 aa13.77□□□□□ -0.21
SMAD4-211ENST00000590499 MAST2Q6P0Q8 1798 aa13.77□□□□□ -0.21
SMAD4-211ENST00000590499 ERC1Q8IUD2 1116 aa13.77□□□□□ -0.21
SMAD4-211ENST00000590499 ZNF384Q8TF68 577 aa13.77□□□□□ -0.21
SMAD4-211ENST00000590499 ZNF512BQ96KM6 892 aaPredicted RBP13.77□□□□□ -0.21
SMAD4-211ENST00000590499 TLR7Q9NYK1 1049 aaKnown RBP13.77□□□□□ -0.21
SMAD4-211ENST00000590499 RFX7Q2KHR2 1363 aa13.76□□□□□ -0.21
SMAD4-211ENST00000590499 RPAP1Q9BWH6 1393 aaPredicted RBP13.76□□□□□ -0.21
SMAD4-211ENST00000590499 TCP10L2B9ZVM9 353 aa13.76□□□□□ -0.21
SMAD4-211ENST00000590499 HMMRO75330 724 aa13.76□□□□□ -0.21
SMAD4-211ENST00000590499 RRP1P56182 461 aaKnown RBP13.76□□□□□ -0.21
SMAD4-211ENST00000590499 TTLL12Q14166 644 aaPredicted RBP13.76□□□□□ -0.21
SMAD4-211ENST00000590499 SUPT20HL1Q3ZLR7 823 aa13.76□□□□□ -0.21
SMAD4-211ENST00000590499 CDC42EP5Q6NZY7 148 aa13.76□□□□□ -0.21
SMAD4-211ENST00000590499 ARMC9Q7Z3E5 817 aa13.76□□□□□ -0.21
SMAD4-211ENST00000590499 FAM83AQ86UY5 434 aa13.76□□□□□ -0.21
SMAD4-211ENST00000590499 ZNF516Q92618 1163 aa13.76□□□□□ -0.21
SMAD4-211ENST00000590499 TMEM39BQ9GZU3 492 aa13.76□□□□□ -0.21
SMAD4-211ENST00000590499 NPDC1Q9NQX5 325 aaPredicted RBP13.76□□□□□ -0.21
SMAD4-211ENST00000590499 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.76□□□□□ -0.21
SMAD4-211ENST00000590499 ABCF2Q9UG63 623 aa13.76□□□□□ -0.21
SMAD4-211ENST00000590499 FZD1Q9UP38 647 aa13.76□□□□□ -0.21
SMAD4-211ENST00000590499 PRKG1Q13976 671 aa13.75□□□□□ -0.21
SMAD4-211ENST00000590499 HSP90AB4PQ58FF6 505 aa13.75□□□□□ -0.21
SMAD4-211ENST00000590499 SPTY2D1Q68D10 685 aaPredicted RBP13.75□□□□□ -0.21
SMAD4-211ENST00000590499 DZIP1Q86YF9 867 aaKnown RBP13.75□□□□□ -0.21
SMAD4-211ENST00000590499 RHPN1Q8TCX5 695 aa13.75□□□□□ -0.21
SMAD4-211ENST00000590499 TATDN2Q93075 761 aa13.75□□□□□ -0.21
SMAD4-211ENST00000590499 AIDAQ96BJ3 306 aa13.75□□□□□ -0.21
SMAD4-211ENST00000590499 CCDC8Q9H0W5 538 aaPredicted RBP13.75□□□□□ -0.21
SMAD4-211ENST00000590499 ANGEL1Q9UNK9 670 aaKnown RBP13.75□□□□□ -0.21
SMAD4-211ENST00000590499 DOCK2Q92608 1830 aa13.74□□□□□ -0.21
SMAD4-211ENST00000590499 C3orf80F5H4A9 247 aa13.74□□□□□ -0.21
SMAD4-211ENST00000590499 PPP1R12BO60237 982 aaPredicted RBP13.74□□□□□ -0.21
SMAD4-211ENST00000590499 USP2O75604 605 aaPredicted RBP13.74□□□□□ -0.21
SMAD4-211ENST00000590499 HSPA8P11142 646 aaKnown RBP13.74□□□□□ -0.21
SMAD4-211ENST00000590499 TNNI2P48788 182 aa13.74□□□□□ -0.21
SMAD4-211ENST00000590499 CTCFP49711 727 aaPredicted RBP13.74□□□□□ -0.21
SMAD4-211ENST00000590499 KIF23Q02241 960 aaPredicted RBP13.74□□□□□ -0.21
SMAD4-211ENST00000590499 MECOMQ03112 1051 aa13.74□□□□□ -0.21
SMAD4-211ENST00000590499 CCDC158Q5M9N0 1113 aa13.74□□□□□ -0.21
SMAD4-211ENST00000590499 TTC39AQ5SRH9 613 aa13.74□□□□□ -0.21
SMAD4-211ENST00000590499 TBC1D9Q6ZT07 1266 aa13.74□□□□□ -0.21
SMAD4-211ENST00000590499 ERICH6Q7L0X2 663 aa13.74□□□□□ -0.21
SMAD4-211ENST00000590499 TMOD2Q9NZR1 351 aa13.74□□□□□ -0.21
SMAD4-211ENST00000590499 RBM27Q9P2N5 1060 aaKnown RBP13.74□□□□□ -0.21
SMAD4-211ENST00000590499 MROH7-TTC4A0A0A0MT08 1334 aa13.73□□□□□ -0.21
SMAD4-211ENST00000590499 UNCXA6NJT0 531 aa13.73□□□□□ -0.21
SMAD4-211ENST00000590499 NFIAQ12857 509 aa13.73□□□□□ -0.21
SMAD4-211ENST00000590499 COL13A1Q5TAT6 717 aaPredicted RBP13.73□□□□□ -0.21
SMAD4-211ENST00000590499 ZNF775Q96BV0 537 aaPredicted RBP13.73□□□□□ -0.21
SMAD4-211ENST00000590499 NSUN4Q96CB9 384 aaKnown RBP13.73□□□□□ -0.21
SMAD4-211ENST00000590499 KIF1BPQ96EK5 621 aa13.73□□□□□ -0.21
SMAD4-211ENST00000590499 IL1RAPL2Q9NP60 686 aa13.73□□□□□ -0.21
SMAD4-211ENST00000590499 PNMA3Q9UL41 463 aa13.73□□□□□ -0.21
SMAD4-211ENST00000590499 AK9Q5TCS8 1911 aa13.72□□□□□ -0.21
SMAD4-211ENST00000590499 CDK5RAP2Q96SN8 1893 aa13.72□□□□□ -0.21
SMAD4-211ENST00000590499 GPR75-ASB3A0A0A6YYF3 556 aa13.72□□□□□ -0.21
SMAD4-211ENST00000590499 CA12O43570 354 aa13.72□□□□□ -0.21
SMAD4-211ENST00000590499 RAB11FIP3O75154 756 aa13.72□□□□□ -0.21
SMAD4-211ENST00000590499 CYP2E1P05181 493 aaPredicted RBP13.72□□□□□ -0.21
SMAD4-211ENST00000590499 AACSQ86V21 672 aa13.72□□□□□ -0.21
SMAD4-211ENST00000590499 SLF2Q8IX21 1173 aa13.72□□□□□ -0.21
SMAD4-211ENST00000590499 CLMNQ96JQ2 1002 aa13.72□□□□□ -0.21
SMAD4-211ENST00000590499 CSRNP1Q96S65 589 aa13.72□□□□□ -0.21
SMAD4-211ENST00000590499 IDI2Q9BXS1 227 aa13.72□□□□□ -0.21
SMAD4-211ENST00000590499 PRDM10Q9NQV6 1147 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 186.1 ms