RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 VPS53Q5VIR6 699 aa26.85■■□□□ 1.89
R3HDM4-205ENST00000589445 CASC1Q6TDU7 716 aa26.85■■□□□ 1.89
R3HDM4-205ENST00000589445 NAPBQ9H115 298 aa26.85■■□□□ 1.89
R3HDM4-205ENST00000589445 CREBZFQ9NS37 354 aa26.85■■□□□ 1.89
R3HDM4-205ENST00000589445 MKRN1Q9UHC7 482 aaKnown RBP26.85■■□□□ 1.89
R3HDM4-205ENST00000589445 SLURP2P0DP57 97 aa26.84■■□□□ 1.89
R3HDM4-205ENST00000589445 HUNKP57058 714 aa26.84■■□□□ 1.89
R3HDM4-205ENST00000589445 FKBP1BP68106 108 aa26.84■■□□□ 1.89
R3HDM4-205ENST00000589445 PAXIP1Q6ZW49 1069 aaPredicted RBP26.84■■□□□ 1.89
R3HDM4-205ENST00000589445 ZNF341Q9BYN7 854 aa26.84■■□□□ 1.89
R3HDM4-205ENST00000589445 IL25Q9H293 177 aa26.84■■□□□ 1.89
R3HDM4-205ENST00000589445 PRDM10Q9NQV6 1147 aa26.84■■□□□ 1.89
R3HDM4-205ENST00000589445 ARPP21Q9UBL0 812 aaPredicted RBP26.84■■□□□ 1.89
R3HDM4-205ENST00000589445 CYP2D7A0A087X1C5 515 aa26.83■■□□□ 1.89
R3HDM4-205ENST00000589445 UBE2Q2LH0YL09 131 aa26.83■■□□□ 1.89
R3HDM4-205ENST00000589445 FOXN1O15353 648 aa26.83■■□□□ 1.89
R3HDM4-205ENST00000589445 IREB2P48200 963 aaKnown RBP26.83■■□□□ 1.89
R3HDM4-205ENST00000589445 TTC6Q86TZ1 520 aa26.83■■□□□ 1.89
R3HDM4-205ENST00000589445 WRNIP1Q96S55 665 aa26.83■■□□□ 1.89
R3HDM4-205ENST00000589445 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.83■■□□□ 1.89
R3HDM4-205ENST00000589445 PI4KBQ9UBF8 816 aa26.83■■□□□ 1.89
R3HDM4-205ENST00000589445 PATL2C9JE40 543 aaKnown RBP26.82■■□□□ 1.88
R3HDM4-205ENST00000589445 EVX2Q03828 476 aa26.82■■□□□ 1.88
R3HDM4-205ENST00000589445 TLL2Q9Y6L7 1015 aa26.82■■□□□ 1.88
R3HDM4-205ENST00000589445 USP17L12C9JPN9 530 aa26.81■■□□□ 1.88
R3HDM4-205ENST00000589445 USP17L21D6R901 530 aa26.81■■□□□ 1.88
R3HDM4-205ENST00000589445 GIMAP6Q6P9H5 292 aa26.81■■□□□ 1.88
R3HDM4-205ENST00000589445 IFNL3Q8IZI9 196 aa26.81■■□□□ 1.88
R3HDM4-205ENST00000589445 MINDY4BA8MYZ0 360 aa26.8■■□□□ 1.88
R3HDM4-205ENST00000589445 FOXP2O15409 715 aa26.8■■□□□ 1.88
R3HDM4-205ENST00000589445 PLCD1P51178 756 aa26.8■■□□□ 1.88
R3HDM4-205ENST00000589445 SAPCD2Q86UD0 394 aa26.8■■□□□ 1.88
R3HDM4-205ENST00000589445 HERC5Q9UII4 1024 aaKnown RBP26.8■■□□□ 1.88
R3HDM4-205ENST00000589445 SERPINB13Q9UIV8 391 aa26.8■■□□□ 1.88
R3HDM4-205ENST00000589445 USP2O75604 605 aaPredicted RBP26.79■■□□□ 1.88
R3HDM4-205ENST00000589445 HSPD1P10809 573 aaKnown RBP26.79■■□□□ 1.88
R3HDM4-205ENST00000589445 GRM1Q13255 1194 aa26.79■■□□□ 1.88
R3HDM4-205ENST00000589445 CTR9Q6PD62 1173 aa26.79■■□□□ 1.88
R3HDM4-205ENST00000589445 STK11IPQ8N1F8 1099 aa26.79■■□□□ 1.88
R3HDM4-205ENST00000589445 ESYT1Q9BSJ8 1104 aa26.79■■□□□ 1.88
R3HDM4-205ENST00000589445 CSADQ9Y600 493 aa26.79■■□□□ 1.88
R3HDM4-205ENST00000589445 SGSM2O43147 1006 aa26.78■■□□□ 1.88
R3HDM4-205ENST00000589445 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.78■■□□□ 1.88
R3HDM4-205ENST00000589445 EHD4Q9H223 541 aa26.78■■□□□ 1.88
R3HDM4-205ENST00000589445 DNAJC18Q9H819 358 aa26.78■■□□□ 1.88
R3HDM4-205ENST00000589445 CTCFP49711 727 aaPredicted RBP26.77■■□□□ 1.88
R3HDM4-205ENST00000589445 CLMNQ96JQ2 1002 aa26.77■■□□□ 1.88
R3HDM4-205ENST00000589445 ROBO3Q96MS0 1386 aa26.76■■□□□ 1.87
R3HDM4-205ENST00000589445 SMIM22K7EJ46 135 aa26.76■■□□□ 1.87
R3HDM4-205ENST00000589445 INPP5BP32019 993 aa26.76■■□□□ 1.87
R3HDM4-205ENST00000589445 VGLL4Q14135 290 aa26.76■■□□□ 1.87
R3HDM4-205ENST00000589445 MAP3K11Q16584 847 aa26.76■■□□□ 1.87
R3HDM4-205ENST00000589445 C12orf60Q5U649 245 aa26.76■■□□□ 1.87
R3HDM4-205ENST00000589445 ANKRD13AQ8IZ07 590 aa26.76■■□□□ 1.87
R3HDM4-205ENST00000589445 SLC44A5Q8NCS7 719 aa26.76■■□□□ 1.87
R3HDM4-205ENST00000589445 DYNLL2Q96FJ2 89 aa26.76■■□□□ 1.87
R3HDM4-205ENST00000589445 TBC1D12O60347 775 aa26.75■■□□□ 1.87
R3HDM4-205ENST00000589445 SBK1Q52WX2 424 aa26.75■■□□□ 1.87
R3HDM4-205ENST00000589445 FOXP4Q8IVH2 680 aaPredicted RBP26.75■■□□□ 1.87
R3HDM4-205ENST00000589445 ZKSCAN4Q969J2 545 aaPredicted RBP26.75■■□□□ 1.87
R3HDM4-205ENST00000589445 ELP3Q9H9T3 547 aa26.75■■□□□ 1.87
R3HDM4-205ENST00000589445 ZMYM6O95789 1325 aa26.74■■□□□ 1.87
R3HDM4-205ENST00000589445 ZNF157P51786 506 aaPredicted RBP26.74■■□□□ 1.87
R3HDM4-205ENST00000589445 MAP3K9P80192 1104 aa26.74■■□□□ 1.87
R3HDM4-205ENST00000589445 KIAA1211Q6ZU35 1233 aa26.74■■□□□ 1.87
R3HDM4-205ENST00000589445 DSCC1Q9BVC3 393 aa26.74■■□□□ 1.87
R3HDM4-205ENST00000589445 ANO2Q9NQ90 1003 aa26.74■■□□□ 1.87
R3HDM4-205ENST00000589445 GDF11O95390 407 aa26.73■■□□□ 1.87
R3HDM4-205ENST00000589445 PPARAQ07869 468 aa26.73■■□□□ 1.87
R3HDM4-205ENST00000589445 LDLRAD1Q5T700 205 aa26.73■■□□□ 1.87
R3HDM4-205ENST00000589445 RGMBQ6NW40 437 aa26.73■■□□□ 1.87
R3HDM4-205ENST00000589445 PHIPQ8WWQ0 1821 aa26.72■■□□□ 1.87
R3HDM4-205ENST00000589445 PHF20L1A8MW92 1017 aa26.72■■□□□ 1.87
R3HDM4-205ENST00000589445 FGAP02671 866 aa26.72■■□□□ 1.87
R3HDM4-205ENST00000589445 HAND2P61296 217 aa26.72■■□□□ 1.87
R3HDM4-205ENST00000589445 ALX1Q15699 326 aa26.72■■□□□ 1.87
R3HDM4-205ENST00000589445 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.72■■□□□ 1.87
R3HDM4-205ENST00000589445 SWAP70Q9UH65 585 aa26.72■■□□□ 1.87
R3HDM4-205ENST00000589445 SNCAIPQ9Y6H5 919 aa26.72■■□□□ 1.87
R3HDM4-205ENST00000589445 RASSF10A6NK89 507 aa26.71■■□□□ 1.87
R3HDM4-205ENST00000589445 SLC3A2P08195 630 aaKnown RBP26.71■■□□□ 1.87
R3HDM4-205ENST00000589445 SHMT1P34896 483 aa26.71■■□□□ 1.87
R3HDM4-205ENST00000589445 MAP3K10Q02779 954 aa26.71■■□□□ 1.87
R3HDM4-205ENST00000589445 PTH1RQ03431 593 aa26.71■■□□□ 1.87
R3HDM4-205ENST00000589445 DEFB115Q30KQ5 88 aa26.71■■□□□ 1.87
R3HDM4-205ENST00000589445 CYP4F22Q6NT55 531 aa26.71■■□□□ 1.87
R3HDM4-205ENST00000589445 C16orf86Q6ZW13 317 aa26.71■■□□□ 1.87
R3HDM4-205ENST00000589445 METTL16Q86W50 562 aaKnown RBP26.71■■□□□ 1.87
R3HDM4-205ENST00000589445 SCYL3Q8IZE3 742 aa26.71■■□□□ 1.87
R3HDM4-205ENST00000589445 PICK1Q9NRD5 415 aa26.71■■□□□ 1.87
R3HDM4-205ENST00000589445 ZNF112Q9UJU3 913 aa26.71■■□□□ 1.87
R3HDM4-205ENST00000589445 THSD7BQ9C0I4 1608 aa26.71■■□□□ 1.87
R3HDM4-205ENST00000589445 CTDSPL2Q05D32 466 aa26.7■■□□□ 1.86
R3HDM4-205ENST00000589445 GABPAQ06546 454 aa26.7■■□□□ 1.86
R3HDM4-205ENST00000589445 MKRN3Q13064 507 aaKnown RBP26.7■■□□□ 1.86
R3HDM4-205ENST00000589445 RASAL3Q86YV0 1011 aa26.7■■□□□ 1.86
R3HDM4-205ENST00000589445 SLC10A4Q96EP9 437 aa26.7■■□□□ 1.86
R3HDM4-205ENST00000589445 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.7■■□□□ 1.86
R3HDM4-205ENST00000589445 MPHOSPH10O00566 681 aaKnown RBP26.69■■□□□ 1.86
R3HDM4-205ENST00000589445 NOL9Q5SY16 702 aaKnown RBP26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms