RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 TRIM17Q9Y577 477 aa17.56■□□□□ 0.4
DDX39A-208ENST00000588692 A0A0G2JLL6 359 aaPredicted RBP17.55■□□□□ 0.4
DDX39A-208ENST00000588692 SLURP2P0DP57 97 aa17.55■□□□□ 0.4
DDX39A-208ENST00000588692 DYNLL1P63167 89 aaKnown RBP17.55■□□□□ 0.4
DDX39A-208ENST00000588692 MOGSQ13724 837 aa17.55■□□□□ 0.4
DDX39A-208ENST00000588692 FASTKD5Q7L8L6 764 aaKnown RBP17.55■□□□□ 0.4
DDX39A-208ENST00000588692 PRRT2Q7Z6L0 340 aaPredicted RBP17.55■□□□□ 0.4
DDX39A-208ENST00000588692 CD99L2Q8TCZ2 262 aa17.55■□□□□ 0.4
DDX39A-208ENST00000588692 TBC1D2Q9BYX2 928 aa17.55■□□□□ 0.4
DDX39A-208ENST00000588692 AFG3L2Q9Y4W6 797 aa17.55■□□□□ 0.4
DDX39A-208ENST00000588692 FAM196BA6NMK8 535 aa17.54■□□□□ 0.4
DDX39A-208ENST00000588692 PDHXO00330 501 aa17.54■□□□□ 0.4
DDX39A-208ENST00000588692 GOLIM4O00461 696 aa17.54■□□□□ 0.4
DDX39A-208ENST00000588692 HLA-DOAP06340 250 aa17.54■□□□□ 0.4
DDX39A-208ENST00000588692 ATP5JP18859 108 aa17.54■□□□□ 0.4
DDX39A-208ENST00000588692 FOXP4Q8IVH2 680 aaPredicted RBP17.54■□□□□ 0.4
DDX39A-208ENST00000588692 MIGA1Q8NAN2 632 aa17.54■□□□□ 0.4
DDX39A-208ENST00000588692 DNAJC2Q99543 621 aaKnown RBP17.54■□□□□ 0.4
DDX39A-208ENST00000588692 EFCC1Q9HA90 598 aa17.54■□□□□ 0.4
DDX39A-208ENST00000588692 DDX60LQ5H9U9 1706 aaKnown RBP17.53■□□□□ 0.4
DDX39A-208ENST00000588692 MYH7P12883 1935 aa17.53■□□□□ 0.4
DDX39A-208ENST00000588692 CAP2P40123 477 aa17.53■□□□□ 0.4
DDX39A-208ENST00000588692 RGS19P49795 217 aa17.53■□□□□ 0.4
DDX39A-208ENST00000588692 SLC9C2Q5TAH2 1124 aa17.53■□□□□ 0.4
DDX39A-208ENST00000588692 METTL16Q86W50 562 aaKnown RBP17.53■□□□□ 0.4
DDX39A-208ENST00000588692 PARK7Q99497 189 aaKnown RBP17.53■□□□□ 0.4
DDX39A-208ENST00000588692 TRIM34Q9BYJ4 488 aa17.53■□□□□ 0.4
DDX39A-208ENST00000588692 DCTPP1Q9H773 170 aa17.53■□□□□ 0.4
DDX39A-208ENST00000588692 NAV1Q8NEY1 1877 aa17.53■□□□□ 0.4
DDX39A-208ENST00000588692 LOC285556D6RIA3 1793 aa17.52■□□□□ 0.4
DDX39A-208ENST00000588692 PDE6AP16499 860 aa17.52■□□□□ 0.4
DDX39A-208ENST00000588692 USP5P45974 858 aa17.52■□□□□ 0.4
DDX39A-208ENST00000588692 CRACR2BQ8N4Y2 399 aaPredicted RBP17.52■□□□□ 0.4
DDX39A-208ENST00000588692 YTHDC1Q96MU7 727 aaKnown RBP17.52■□□□□ 0.4
DDX39A-208ENST00000588692 RIOK1Q9BRS2 568 aaKnown RBP17.52■□□□□ 0.4
DDX39A-208ENST00000588692 BCL11AQ9H165 835 aa17.52■□□□□ 0.4
DDX39A-208ENST00000588692 PAG1Q9NWQ8 432 aa17.52■□□□□ 0.4
DDX39A-208ENST00000588692 PALD1Q9ULE6 856 aa17.52■□□□□ 0.4
DDX39A-208ENST00000588692 SLC45A1Q9Y2W3 748 aa17.52■□□□□ 0.4
DDX39A-208ENST00000588692 MAGEB6P1A0A0J9YX57 407 aa17.51■□□□□ 0.39
DDX39A-208ENST00000588692 KIF22Q14807 665 aa17.51■□□□□ 0.39
DDX39A-208ENST00000588692 GPAT2Q6NUI2 795 aa17.51■□□□□ 0.39
DDX39A-208ENST00000588692 HAUS7Q99871 368 aa17.51■□□□□ 0.39
DDX39A-208ENST00000588692 GINM1Q9NU53 330 aa17.51■□□□□ 0.39
DDX39A-208ENST00000588692 PTPN22Q9Y2R2 807 aa17.51■□□□□ 0.39
DDX39A-208ENST00000588692 ADGRA2Q96PE1 1338 aa17.51■□□□□ 0.39
DDX39A-208ENST00000588692 TRIM75PA6NK02 468 aa17.5■□□□□ 0.39
DDX39A-208ENST00000588692 ASNSP08243 561 aa17.5■□□□□ 0.39
DDX39A-208ENST00000588692 C17orf99Q6UX52 265 aa17.5■□□□□ 0.39
DDX39A-208ENST00000588692 GADL1Q6ZQY3 521 aa17.5■□□□□ 0.39
DDX39A-208ENST00000588692 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.5■□□□□ 0.396e-8■■■□□ 16.2
DDX39A-208ENST00000588692 BOLA2Q9H3K6 86 aa17.5■□□□□ 0.39
DDX39A-208ENST00000588692 DNAJC18Q9H819 358 aa17.5■□□□□ 0.39
DDX39A-208ENST00000588692 AS3MTQ9HBK9 375 aa17.5■□□□□ 0.39
DDX39A-208ENST00000588692 SAP30BPQ9UHR5 308 aaKnown RBP17.5■□□□□ 0.39
DDX39A-208ENST00000588692 ZNF532Q9HCE3 1301 aa17.5■□□□□ 0.39
DDX39A-208ENST00000588692 USP17L5A8MUK1 530 aa17.5■□□□□ 0.39
DDX39A-208ENST00000588692 GNRH1P01148 92 aa17.5■□□□□ 0.39
DDX39A-208ENST00000588692 LACTBP83111 547 aaPredicted RBP17.5■□□□□ 0.39
DDX39A-208ENST00000588692 ZNF280CQ8ND82 737 aa17.5■□□□□ 0.39
DDX39A-208ENST00000588692 CRNKL1Q9BZJ0 848 aaKnown RBP17.5■□□□□ 0.39
DDX39A-208ENST00000588692 EHD4Q9H223 541 aa17.5■□□□□ 0.39
DDX39A-208ENST00000588692 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.5■□□□□ 0.39
DDX39A-208ENST00000588692 HTTP42858 3142 aa17.49■□□□□ 0.39
DDX39A-208ENST00000588692 TCRBV5S4A2TA0A5A2 114 aa17.49■□□□□ 0.39
DDX39A-208ENST00000588692 SMARCA5O60264 1052 aaPredicted RBP17.49■□□□□ 0.39
DDX39A-208ENST00000588692 RRP1BQ14684 758 aaKnown RBP17.49■□□□□ 0.39
DDX39A-208ENST00000588692 TTC6Q86TZ1 520 aa17.49■□□□□ 0.39
DDX39A-208ENST00000588692 PROCA1Q8NCQ7 364 aaPredicted RBP17.49■□□□□ 0.39
DDX39A-208ENST00000588692 GPATCH3Q96I76 525 aa17.49■□□□□ 0.39
DDX39A-208ENST00000588692 ECHDC1Q9NTX5 307 aa17.49■□□□□ 0.39
DDX39A-208ENST00000588692 AGTPBP1Q9UPW5 1226 aa17.49■□□□□ 0.39
DDX39A-208ENST00000588692 MLLT1Q03111 559 aaPredicted RBP17.48■□□□□ 0.39
DDX39A-208ENST00000588692 SPP2Q13103 211 aa17.48■□□□□ 0.39
DDX39A-208ENST00000588692 CCDC84Q86UT8 332 aaPredicted RBP17.48■□□□□ 0.39
DDX39A-208ENST00000588692 EDC3Q96F86 508 aaKnown RBP17.48■□□□□ 0.39
DDX39A-208ENST00000588692 CPA4Q9UI42 421 aa17.48■□□□□ 0.39
DDX39A-208ENST00000588692 SERPINB13Q9UIV8 391 aa17.48■□□□□ 0.39
DDX39A-208ENST00000588692 PCDHB15Q9Y5E8 787 aa17.48■□□□□ 0.39
DDX39A-208ENST00000588692 ZSWIM8A7E2V4 1837 aa17.48■□□□□ 0.39
DDX39A-208ENST00000588692 ADD2P35612 726 aa17.47■□□□□ 0.39
DDX39A-208ENST00000588692 PRMT2P55345 433 aa17.47■□□□□ 0.39
DDX39A-208ENST00000588692 SOX10P56693 466 aa17.47■□□□□ 0.39
DDX39A-208ENST00000588692 CAP1Q01518 475 aa17.47■□□□□ 0.39
DDX39A-208ENST00000588692 ZSCAN25Q6NSZ9 544 aa17.47■□□□□ 0.39
DDX39A-208ENST00000588692 WDR18Q9BV38 432 aa17.47■□□□□ 0.39
DDX39A-208ENST00000588692 PNMA3Q9UL41 463 aa17.47■□□□□ 0.39
DDX39A-208ENST00000588692 RBBP6Q7Z6E9 1792 aaKnown RBP17.47■□□□□ 0.39
DDX39A-208ENST00000588692 CYP2C8P10632 490 aa17.46■□□□□ 0.39
DDX39A-208ENST00000588692 BCRP11274 1271 aa17.46■□□□□ 0.39
DDX39A-208ENST00000588692 PABPC4Q13310 644 aaKnown RBP eCLIP17.46■□□□□ 0.391e-6■□□□□ 8.6
DDX39A-208ENST00000588692 UBE3CQ15386 1083 aa17.46■□□□□ 0.39
DDX39A-208ENST00000588692 SH3D19Q5HYK7 790 aa17.46■□□□□ 0.39
DDX39A-208ENST00000588692 ZBTB21Q9ULJ3 1066 aa17.46■□□□□ 0.39
DDX39A-208ENST00000588692 MGAMO43451 1857 aa17.46■□□□□ 0.39
DDX39A-208ENST00000588692 SLC4A8Q2Y0W8 1093 aa17.45■□□□□ 0.38
DDX39A-208ENST00000588692 TATDN1Q6P1N9 297 aa17.45■□□□□ 0.38
DDX39A-208ENST00000588692 LCORLQ8N3X6 602 aa17.45■□□□□ 0.38
DDX39A-208ENST00000588692 SMCR8Q8TEV9 937 aaPredicted RBP17.45■□□□□ 0.38
DDX39A-208ENST00000588692 ARMC5Q96C12 935 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms