RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-218	ENST00000588344	TLL2	Q9Y6L7	1015 aa		10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	ZMYM6	O95789	1325 aa		10.82	□□□□□ -0.68
CIRBP-218	ENST00000588344	FGA	P02671	866 aa		10.81	□□□□□ -0.68
CIRBP-218	ENST00000588344	PC	P11498	1178 aa	Known RBP	10.81	□□□□□ -0.68
CIRBP-218	ENST00000588344	HUNK	P57058	714 aa		10.81	□□□□□ -0.68
CIRBP-218	ENST00000588344	LDLRAD1	Q5T700	205 aa		10.81	□□□□□ -0.68
CIRBP-218	ENST00000588344	CCDC129	Q6ZRS4	1044 aa		10.81	□□□□□ -0.68
CIRBP-218	ENST00000588344	MIGA2	Q7L4E1	593 aa		10.81	□□□□□ -0.68
CIRBP-218	ENST00000588344	ZNF589	Q86UQ0	364 aa	Predicted RBP	10.81	□□□□□ -0.68
CIRBP-218	ENST00000588344	ABT1	Q9ULW3	272 aa	Known RBP	10.81	□□□□□ -0.68
CIRBP-218	ENST00000588344	CSAD	Q9Y600	493 aa		10.81	□□□□□ -0.68
CIRBP-218	ENST00000588344	MAST2	Q6P0Q8	1798 aa		10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	UBE2Q2L	H0YL09	131 aa		10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	ZNF213	O14771	459 aa		10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	EPB41L2	O43491	1005 aa	Known RBP	10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	ECE1	P42892	770 aa		10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	PLCD1	P51178	756 aa		10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	GABPA	Q06546	454 aa		10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	FMR1	Q06787	632 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	PDE4B	Q07343	736 aa		10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	DEFB115	Q30KQ5	88 aa		10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	TATDN1	Q6P1N9	297 aa		10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	DLK2	Q6UY11	383 aa		10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.8	□□□□□ -0.68	7e-15	■□□□□ 9.7
CIRBP-218	ENST00000588344	SLC10A4	Q96EP9	437 aa		10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	CCDC17	Q96LX7	622 aa		10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	WRNIP1	Q96S55	665 aa		10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	ESYT1	Q9BSJ8	1104 aa		10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	TBC1D2	Q9BYX2	928 aa		10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	ANAPC4	Q9UJX5	808 aa		10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344		U3KPZ7	1027 aa	Predicted RBP	10.8	□□□□□ -0.68
CIRBP-218	ENST00000588344	DOCK2	Q92608	1830 aa		10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	RASSF10	A6NK89	507 aa		10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	PHF20L1	A8MW92	1017 aa		10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	MINDY4B	A8MYZ0	360 aa		10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	REC8	O95072	547 aa		10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	PRKG1	Q13976	671 aa		10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	IMMT	Q16891	758 aa	Known RBP	10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	CERKL	Q49MI3	558 aa	Predicted RBP	10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	NOL9	Q5SY16	702 aa	Known RBP	10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	RGMB	Q6NW40	437 aa		10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	C16orf86	Q6ZW13	317 aa		10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	CDAN1	Q8IWY9	1227 aa		10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	REM2	Q8IYK8	340 aa	Predicted RBP	10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	MAP4K1	Q92918	833 aa		10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	RNF41	Q9H4P4	317 aa	Predicted RBP	10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	MKNK2	Q9HBH9	465 aa		10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	PICK1	Q9NRD5	415 aa		10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	MYH2	Q9UKX2	1941 aa		10.79	□□□□□ -0.68
CIRBP-218	ENST00000588344	ASNS	P08243	561 aa		10.78	□□□□□ -0.68
CIRBP-218	ENST00000588344	CAP2	P40123	477 aa		10.78	□□□□□ -0.68
CIRBP-218	ENST00000588344	ZNF157	P51786	506 aa	Predicted RBP	10.78	□□□□□ -0.68
CIRBP-218	ENST00000588344	PPARA	Q07869	468 aa		10.78	□□□□□ -0.68
CIRBP-218	ENST00000588344	VPS53	Q5VIR6	699 aa		10.78	□□□□□ -0.68
CIRBP-218	ENST00000588344	SCYL3	Q8IZE3	742 aa		10.78	□□□□□ -0.68
CIRBP-218	ENST00000588344	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.78	□□□□□ -0.68
CIRBP-218	ENST00000588344	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.78	□□□□□ -0.68
CIRBP-218	ENST00000588344	CABP5	Q9NP86	173 aa		10.78	□□□□□ -0.68
CIRBP-218	ENST00000588344	FOXP2	O15409	715 aa		10.77	□□□□□ -0.69
CIRBP-218	ENST00000588344	ZBTB48	P10074	688 aa	Predicted RBP	10.77	□□□□□ -0.69
CIRBP-218	ENST00000588344	CDK8	P49336	464 aa		10.77	□□□□□ -0.69
CIRBP-218	ENST00000588344	INHBE	P58166	350 aa		10.77	□□□□□ -0.69
CIRBP-218	ENST00000588344	PPAT	Q06203	517 aa		10.77	□□□□□ -0.69
CIRBP-218	ENST00000588344	VGLL4	Q14135	290 aa		10.77	□□□□□ -0.69
CIRBP-218	ENST00000588344	PPP4R3B	Q5MIZ7	849 aa		10.77	□□□□□ -0.69
CIRBP-218	ENST00000588344	RNF20	Q5VTR2	975 aa		10.77	□□□□□ -0.69
CIRBP-218	ENST00000588344	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.77	□□□□□ -0.69
CIRBP-218	ENST00000588344	ERO1B	Q86YB8	467 aa		10.77	□□□□□ -0.69
CIRBP-218	ENST00000588344	ANO2	Q9NQ90	1003 aa		10.77	□□□□□ -0.69
CIRBP-218	ENST00000588344	FGR	P09769	529 aa		10.76	□□□□□ -0.69
CIRBP-218	ENST00000588344	CYP2D6	P10635	497 aa		10.76	□□□□□ -0.69
CIRBP-218	ENST00000588344	SHMT1	P34896	483 aa		10.76	□□□□□ -0.69
CIRBP-218	ENST00000588344	MAP2K2	P36507	400 aa		10.76	□□□□□ -0.69
CIRBP-218	ENST00000588344	ABCB5	Q2M3G0	1257 aa		10.76	□□□□□ -0.69
CIRBP-218	ENST00000588344	MFSD6	Q6ZSS7	791 aa		10.76	□□□□□ -0.69
CIRBP-218	ENST00000588344	TMEM179	Q6ZVK1	233 aa		10.76	□□□□□ -0.69
CIRBP-218	ENST00000588344	MOB2	Q70IA6	237 aa		10.76	□□□□□ -0.69
CIRBP-218	ENST00000588344	ZKSCAN4	Q969J2	545 aa	Predicted RBP	10.76	□□□□□ -0.69
CIRBP-218	ENST00000588344	CNNM2	Q9H8M5	875 aa		10.76	□□□□□ -0.69
CIRBP-218	ENST00000588344	AS3MT	Q9HBK9	375 aa		10.76	□□□□□ -0.69
CIRBP-218	ENST00000588344	ROBO3	Q96MS0	1386 aa		10.76	□□□□□ -0.69
CIRBP-218	ENST00000588344	SSC5D	A1L4H1	1573 aa		10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	CYP2D7	A0A087X1C5	515 aa		10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	SPDYE5	A6NIY4	337 aa		10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	USP17L5	A8MUK1	530 aa		10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	CXCL11	O14625	94 aa		10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	ORC4	O43929	436 aa		10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	SLC10A3	P09131	477 aa		10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	PTPRA	P18433	802 aa		10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	INPP5B	P32019	993 aa		10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	TRDN	Q13061	729 aa		10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	NOG	Q13253	232 aa		10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	SLC4A8	Q2Y0W8	1093 aa		10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	AKNAD1	Q5T1N1	836 aa		10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	STAG1	Q8WVM7	1258 aa		10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	DYNLL2	Q96FJ2	89 aa		10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	LSG1	Q9H089	658 aa	Known RBP	10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	IL25	Q9H293	177 aa		10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	DNAJC18	Q9H819	358 aa		10.75	□□□□□ -0.69
CIRBP-218	ENST00000588344	MANSC4	A6NHS7	340 aa	Predicted RBP	10.74	□□□□□ -0.69

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