RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 FCGRTP55899 365 aa13.7□□□□□ -0.22
ACTN4-209ENST00000586538 GADL1Q6ZQY3 521 aa13.7□□□□□ -0.22
ACTN4-209ENST00000586538 FOXP4Q8IVH2 680 aaPredicted RBP13.7□□□□□ -0.22
ACTN4-209ENST00000586538 CRACR2BQ8N4Y2 399 aaPredicted RBP13.7□□□□□ -0.22
ACTN4-209ENST00000586538 ZNF384Q8TF68 577 aa13.7□□□□□ -0.22
ACTN4-209ENST00000586538 EAF2Q96CJ1 260 aaPredicted RBP13.7□□□□□ -0.22
ACTN4-209ENST00000586538 CCDC8Q9H0W5 538 aaPredicted RBP13.7□□□□□ -0.22
ACTN4-209ENST00000586538 EXOC6BQ9Y2D4 811 aa13.7□□□□□ -0.22
ACTN4-209ENST00000586538 TRIM75PA6NK02 468 aa13.69□□□□□ -0.22
ACTN4-209ENST00000586538 IFIT2P09913 472 aaKnown RBP13.69□□□□□ -0.22
ACTN4-209ENST00000586538 CYP7A1P22680 504 aa13.69□□□□□ -0.22
ACTN4-209ENST00000586538 CAP2P40123 477 aa13.69□□□□□ -0.22
ACTN4-209ENST00000586538 RHPN1Q8TCX5 695 aa13.69□□□□□ -0.22
ACTN4-209ENST00000586538 SH3RF3Q8TEJ3 882 aaPredicted RBP13.69□□□□□ -0.22
ACTN4-209ENST00000586538 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.69□□□□□ -0.22
ACTN4-209ENST00000586538 ZNF333Q96JL9 665 aa13.69□□□□□ -0.22
ACTN4-209ENST00000586538 CPA4Q9UI42 421 aa13.69□□□□□ -0.22
ACTN4-209ENST00000586538 AGTPBP1Q9UPW5 1226 aa13.69□□□□□ -0.22
ACTN4-209ENST00000586538 PTCH2Q9Y6C5 1203 aa13.69□□□□□ -0.22
ACTN4-209ENST00000586538 FLT1P17948 1338 aa13.68□□□□□ -0.22
ACTN4-209ENST00000586538 USP17L5A8MUK1 530 aa13.68□□□□□ -0.22
ACTN4-209ENST00000586538 FMNL1O95466 1100 aaPredicted RBP13.68□□□□□ -0.22
ACTN4-209ENST00000586538 PSMC4P43686 418 aa13.68□□□□□ -0.22
ACTN4-209ENST00000586538 PDE3AQ14432 1141 aa13.68□□□□□ -0.22
ACTN4-209ENST00000586538 SLC4A8Q2Y0W8 1093 aa13.68□□□□□ -0.22
ACTN4-209ENST00000586538 PRPF38BQ5VTL8 546 aaKnown RBP13.68□□□□□ -0.22
ACTN4-209ENST00000586538 ZNF280CQ8ND82 737 aa13.68□□□□□ -0.22
ACTN4-209ENST00000586538 RAET1EQ8TD07 263 aa13.68□□□□□ -0.22
ACTN4-209ENST00000586538 TGFBRAP1Q8WUH2 860 aa13.68□□□□□ -0.22
ACTN4-209ENST00000586538 FOCADQ5VW36 1801 aa13.68□□□□□ -0.22
ACTN4-209ENST00000586538 ADGRA2Q96PE1 1338 aa13.67□□□□□ -0.22
ACTN4-209ENST00000586538 ATAD5Q96QE3 1844 aa13.67□□□□□ -0.22
ACTN4-209ENST00000586538 OSBPP22059 807 aa13.67□□□□□ -0.22
ACTN4-209ENST00000586538 USP5P45974 858 aa13.67□□□□□ -0.22
ACTN4-209ENST00000586538 MOGSQ13724 837 aa13.67□□□□□ -0.22
ACTN4-209ENST00000586538 GPAT2Q6NUI2 795 aa13.67□□□□□ -0.22
ACTN4-209ENST00000586538 MAPKAPK5Q8IW41 473 aa13.67□□□□□ -0.22
ACTN4-209ENST00000586538 MAGEB6Q8N7X4 407 aa13.67□□□□□ -0.22
ACTN4-209ENST00000586538 ZBTB40Q9NUA8 1239 aa13.67□□□□□ -0.22
ACTN4-209ENST00000586538 TLR7Q9NYK1 1049 aaKnown RBP13.67□□□□□ -0.22
ACTN4-209ENST00000586538 SRRDQ9UH36 339 aa13.67□□□□□ -0.22
ACTN4-209ENST00000586538 COG6Q9Y2V7 657 aa13.67□□□□□ -0.22
ACTN4-209ENST00000586538 MYPNQ86TC9 1320 aa13.66□□□□□ -0.22
ACTN4-209ENST00000586538 PTPRFP10586 1907 aa13.66□□□□□ -0.22
ACTN4-209ENST00000586538 BCRP11274 1271 aa13.66□□□□□ -0.22
ACTN4-209ENST00000586538 CAPN2P17655 700 aa13.66□□□□□ -0.22
ACTN4-209ENST00000586538 GCLCP48506 637 aaPredicted RBP13.66□□□□□ -0.22
ACTN4-209ENST00000586538 UBXN2AP68543 259 aa13.66□□□□□ -0.22
ACTN4-209ENST00000586538 TTC6Q86TZ1 520 aa13.66□□□□□ -0.22
ACTN4-209ENST00000586538 NKX2-3Q8TAU0 364 aa13.66□□□□□ -0.22
ACTN4-209ENST00000586538 TRIM47Q96LD4 638 aa13.66□□□□□ -0.22
ACTN4-209ENST00000586538 PIH1D3Q9NQM4 214 aaKnown RBP13.66□□□□□ -0.22
ACTN4-209ENST00000586538 TMOD4Q9NZQ9 345 aa13.66□□□□□ -0.22
ACTN4-209ENST00000586538 PHIPQ8WWQ0 1821 aa13.66□□□□□ -0.22
ACTN4-209ENST00000586538 C19orf81C9J6K1 198 aa13.65□□□□□ -0.22
ACTN4-209ENST00000586538 CYP2C8P10632 490 aa13.65□□□□□ -0.22
ACTN4-209ENST00000586538 SPP2Q13103 211 aa13.65□□□□□ -0.22
ACTN4-209ENST00000586538 FAM110CQ1W6H9 321 aa13.65□□□□□ -0.22
ACTN4-209ENST00000586538 METTL16Q86W50 562 aaKnown RBP13.65□□□□□ -0.22
ACTN4-209ENST00000586538 SLAIN1Q8ND83 568 aa13.65□□□□□ -0.22
ACTN4-209ENST00000586538 GTF3C2Q8WUA4 911 aaPredicted RBP13.65□□□□□ -0.22
ACTN4-209ENST00000586538 ARHGAP39Q9C0H5 1083 aa13.65□□□□□ -0.22
ACTN4-209ENST00000586538 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.65□□□□□ -0.222e-6■■■□□ 17.4
ACTN4-209ENST00000586538 IL1RAPL2Q9NP60 686 aa13.65□□□□□ -0.22
ACTN4-209ENST00000586538 TAOK2Q9UL54 1235 aa13.65□□□□□ -0.22
ACTN4-209ENST00000586538 PDE4DIPQ5VU43 2346 aa13.65□□□□□ -0.22
ACTN4-209ENST00000586538 LOC285556D6RIA3 1793 aa13.65□□□□□ -0.22
ACTN4-209ENST00000586538 CDK5RAP2Q96SN8 1893 aa13.64□□□□□ -0.23
ACTN4-209ENST00000586538 TNPO2O14787 897 aaKnown RBP13.64□□□□□ -0.23
ACTN4-209ENST00000586538 GRK4P32298 578 aa13.64□□□□□ -0.23
ACTN4-209ENST00000586538 SH3D19Q5HYK7 790 aa13.64□□□□□ -0.23
ACTN4-209ENST00000586538 ADGRA1Q86SQ6 560 aa13.64□□□□□ -0.23
ACTN4-209ENST00000586538 COA7Q96BR5 231 aa13.64□□□□□ -0.23
ACTN4-209ENST00000586538 GCC1Q96CN9 775 aa13.64□□□□□ -0.23
ACTN4-209ENST00000586538 WDR18Q9BV38 432 aa13.64□□□□□ -0.23
ACTN4-209ENST00000586538 CRNKL1Q9BZJ0 848 aaKnown RBP13.64□□□□□ -0.23
ACTN4-209ENST00000586538 EHD4Q9H223 541 aa13.64□□□□□ -0.23
ACTN4-209ENST00000586538 SERPINB13Q9UIV8 391 aa13.64□□□□□ -0.23
ACTN4-209ENST00000586538 HTTP42858 3142 aa13.63□□□□□ -0.23
ACTN4-209ENST00000586538 MAGEB6P1A0A0J9YX57 407 aa13.63□□□□□ -0.23
ACTN4-209ENST00000586538 FAM196BA6NMK8 535 aa13.63□□□□□ -0.23
ACTN4-209ENST00000586538 USP17L10C9JJH3 530 aa13.63□□□□□ -0.23
ACTN4-209ENST00000586538 HMGCS2P54868 508 aa13.63□□□□□ -0.23
ACTN4-209ENST00000586538 BACE1P56817 501 aa13.63□□□□□ -0.23
ACTN4-209ENST00000586538 IRX3P78415 501 aaPredicted RBP13.63□□□□□ -0.23
ACTN4-209ENST00000586538 SLC9C2Q5TAH2 1124 aa13.63□□□□□ -0.23
ACTN4-209ENST00000586538 AMOTL1Q8IY63 956 aa13.63□□□□□ -0.23
ACTN4-209ENST00000586538 MIGA1Q8NAN2 632 aa13.63□□□□□ -0.23
ACTN4-209ENST00000586538 DDRGK1Q96HY6 314 aa13.63□□□□□ -0.23
ACTN4-209ENST00000586538 DNAJC2Q99543 621 aaKnown RBP13.63□□□□□ -0.23
ACTN4-209ENST00000586538 CABP5Q9NP86 173 aa13.63□□□□□ -0.23
ACTN4-209ENST00000586538 BIN2Q9UBW5 565 aaPredicted RBP13.63□□□□□ -0.23
ACTN4-209ENST00000586538 PALD1Q9ULE6 856 aa13.63□□□□□ -0.23
ACTN4-209ENST00000586538 MYH1P12882 1939 aa13.62□□□□□ -0.23
ACTN4-209ENST00000586538 MGAMO43451 1857 aa13.62□□□□□ -0.23
ACTN4-209ENST00000586538 MYO5AQ9Y4I1 1855 aaKnown RBP13.62□□□□□ -0.23
ACTN4-209ENST00000586538 POTEFA5A3E0 1075 aa13.62□□□□□ -0.23
ACTN4-209ENST00000586538 APBB1O00213 710 aa13.62□□□□□ -0.23
ACTN4-209ENST00000586538 USP14P54578 494 aa13.62□□□□□ -0.23
ACTN4-209ENST00000586538 ZSCAN25Q6NSZ9 544 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms