RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 OTOP1Q7RTM1 612 aa15.02■□□□□ -0
SS18-225ENST00000585121 FOXP4Q8IVH2 680 aaPredicted RBP15.02■□□□□ -0
SS18-225ENST00000585121 CRACR2BQ8N4Y2 399 aaPredicted RBP15.02■□□□□ -0
SS18-225ENST00000585121 TBC1D2Q9BYX2 928 aa15.02■□□□□ -0
SS18-225ENST00000585121 FLT1P17948 1338 aa15.02■□□□□ -0
SS18-225ENST00000585121 FAM196BA6NMK8 535 aa15.02□□□□□ -0.01
SS18-225ENST00000585121 RRP1P56182 461 aaKnown RBP15.02□□□□□ -0.01
SS18-225ENST00000585121 SLC9C2Q5TAH2 1124 aa15.02□□□□□ -0.01
SS18-225ENST00000585121 AFG3L2Q9Y4W6 797 aa15.02□□□□□ -0.01
SS18-225ENST00000585121 LAMB1P07942 1786 aa15.01□□□□□ -0.01
SS18-225ENST00000585121 A0A0G2JLL6 359 aaPredicted RBP15.01□□□□□ -0.01
SS18-225ENST00000585121 SLURP2P0DP57 97 aa15.01□□□□□ -0.01
SS18-225ENST00000585121 ATP5JP18859 108 aa15.01□□□□□ -0.01
SS18-225ENST00000585121 CAP2P40123 477 aa15.01□□□□□ -0.01
SS18-225ENST00000585121 GADL1Q6ZQY3 521 aa15.01□□□□□ -0.01
SS18-225ENST00000585121 PRRT2Q7Z6L0 340 aaPredicted RBP15.01□□□□□ -0.01
SS18-225ENST00000585121 GPATCH3Q96I76 525 aa15.01□□□□□ -0.01
SS18-225ENST00000585121 PARK7Q99497 189 aaKnown RBP15.01□□□□□ -0.01
SS18-225ENST00000585121 BOLA2Q9H3K6 86 aa15.01□□□□□ -0.01
SS18-225ENST00000585121 SAP30BPQ9UHR5 308 aaKnown RBP15.01□□□□□ -0.01
SS18-225ENST00000585121 PALD1Q9ULE6 856 aa15.01□□□□□ -0.01
SS18-225ENST00000585121 DOCK2Q92608 1830 aa15.01□□□□□ -0.01
SS18-225ENST00000585121 MAGEB6P1A0A0J9YX57 407 aa15□□□□□ -0.01
SS18-225ENST00000585121 TRIM75PA6NK02 468 aa15□□□□□ -0.01
SS18-225ENST00000585121 DDX24Q9GZR7 859 aaKnown RBP eCLIP15□□□□□ -0.01
SS18-225ENST00000585121 DCTPP1Q9H773 170 aa15□□□□□ -0.01
SS18-225ENST00000585121 AS3MTQ9HBK9 375 aa15□□□□□ -0.01
SS18-225ENST00000585121 PAG1Q9NWQ8 432 aa15□□□□□ -0.01
SS18-225ENST00000585121 MAST2Q6P0Q8 1798 aa15□□□□□ -0.01
SS18-225ENST00000585121 USP17L5A8MUK1 530 aa14.99□□□□□ -0.01
SS18-225ENST00000585121 SMARCA5O60264 1052 aaPredicted RBP14.99□□□□□ -0.01
SS18-225ENST00000585121 PDE6AP16499 860 aa14.99□□□□□ -0.01
SS18-225ENST00000585121 MOGSQ13724 837 aa14.99□□□□□ -0.01
SS18-225ENST00000585121 TTC6Q86TZ1 520 aa14.99□□□□□ -0.01
SS18-225ENST00000585121 CRNKL1Q9BZJ0 848 aaKnown RBP14.99□□□□□ -0.01
SS18-225ENST00000585121 GINM1Q9NU53 330 aa14.99□□□□□ -0.01
SS18-225ENST00000585121 PTPN22Q9Y2R2 807 aa14.99□□□□□ -0.01
SS18-225ENST00000585121 ASNSP08243 561 aa14.98□□□□□ -0.01
SS18-225ENST00000585121 RGS19P49795 217 aa14.98□□□□□ -0.01
SS18-225ENST00000585121 MLLT1Q03111 559 aaPredicted RBP14.98□□□□□ -0.01
SS18-225ENST00000585121 GPAT2Q6NUI2 795 aa14.98□□□□□ -0.01
SS18-225ENST00000585121 METTL16Q86W50 562 aaKnown RBP14.98□□□□□ -0.01
SS18-225ENST00000585121 ZNF280CQ8ND82 737 aa14.98□□□□□ -0.01
SS18-225ENST00000585121 HAUS7Q99871 368 aa14.98□□□□□ -0.01
SS18-225ENST00000585121 CPA4Q9UI42 421 aa14.98□□□□□ -0.01
SS18-225ENST00000585121 SLC45A1Q9Y2W3 748 aa14.98□□□□□ -0.01
SS18-225ENST00000585121 ZNF532Q9HCE3 1301 aa14.98□□□□□ -0.01
SS18-225ENST00000585121 GNRH1P01148 92 aa14.97□□□□□ -0.01
SS18-225ENST00000585121 SOX10P56693 466 aa14.97□□□□□ -0.01
SS18-225ENST00000585121 LACTBP83111 547 aaPredicted RBP14.97□□□□□ -0.01
SS18-225ENST00000585121 SPP2Q13103 211 aa14.97□□□□□ -0.01
SS18-225ENST00000585121 ZSCAN25Q6NSZ9 544 aa14.97□□□□□ -0.01
SS18-225ENST00000585121 C17orf99Q6UX52 265 aa14.97□□□□□ -0.01
SS18-225ENST00000585121 ZBTB47Q9UFB7 747 aaPredicted RBP14.97□□□□□ -0.01
SS18-225ENST00000585121 POLR3DP05423 398 aaPredicted RBP14.97□□□□□ -0.01
SS18-225ENST00000585121 PABPC4Q13310 644 aaKnown RBP eCLIP14.97□□□□□ -0.01
SS18-225ENST00000585121 SLC4A8Q2Y0W8 1093 aa14.97□□□□□ -0.01
SS18-225ENST00000585121 CCDC84Q86UT8 332 aaPredicted RBP14.97□□□□□ -0.01
SS18-225ENST00000585121 PROCA1Q8NCQ7 364 aaPredicted RBP14.97□□□□□ -0.01
SS18-225ENST00000585121 RIOK1Q9BRS2 568 aaKnown RBP14.97□□□□□ -0.01
SS18-225ENST00000585121 ECHDC1Q9NTX5 307 aa14.97□□□□□ -0.01
SS18-225ENST00000585121 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.97□□□□□ -0.01
SS18-225ENST00000585121 PNMA3Q9UL41 463 aa14.97□□□□□ -0.01
SS18-225ENST00000585121 CYP2C8P10632 490 aa14.96□□□□□ -0.02
SS18-225ENST00000585121 HOXD10P28358 340 aa14.96□□□□□ -0.02
SS18-225ENST00000585121 SMCR8Q8TEV9 937 aaPredicted RBP14.96□□□□□ -0.02
SS18-225ENST00000585121 EDC3Q96F86 508 aaKnown RBP14.96□□□□□ -0.02
SS18-225ENST00000585121 SERPINB13Q9UIV8 391 aa14.96□□□□□ -0.02
SS18-225ENST00000585121 AGTPBP1Q9UPW5 1226 aa14.96□□□□□ -0.02
SS18-225ENST00000585121 FMNL1O95466 1100 aaPredicted RBP14.95□□□□□ -0.02
SS18-225ENST00000585121 ADD2P35612 726 aa14.95□□□□□ -0.02
SS18-225ENST00000585121 PRMT2P55345 433 aa14.95□□□□□ -0.02
SS18-225ENST00000585121 RRP1BQ14684 758 aaKnown RBP14.95□□□□□ -0.02
SS18-225ENST00000585121 NBPF11Q86T75 865 aa14.95□□□□□ -0.02
SS18-225ENST00000585121 WDR18Q9BV38 432 aa14.95□□□□□ -0.02
SS18-225ENST00000585121 EHD4Q9H223 541 aa14.95□□□□□ -0.02
SS18-225ENST00000585121 TMOD4Q9NZQ9 345 aa14.95□□□□□ -0.02
SS18-225ENST00000585121 PCDHB15Q9Y5E8 787 aa14.95□□□□□ -0.02
SS18-225ENST00000585121 TCRBV5S4A2TA0A5A2 114 aa14.94□□□□□ -0.02
SS18-225ENST00000585121 GDF11O95390 407 aa14.94□□□□□ -0.02
SS18-225ENST00000585121 OSBPP22059 807 aa14.94□□□□□ -0.02
SS18-225ENST00000585121 PSMC4P43686 418 aa14.94□□□□□ -0.02
SS18-225ENST00000585121 HMGCS2P54868 508 aa14.94□□□□□ -0.02
SS18-225ENST00000585121 DDRGK1Q96HY6 314 aa14.94□□□□□ -0.02
SS18-225ENST00000585121 CRBNQ96SW2 442 aa14.94□□□□□ -0.02
SS18-225ENST00000585121 DNAJC18Q9H819 358 aa14.94□□□□□ -0.02
SS18-225ENST00000585121 MCM9Q9NXL9 1143 aa14.94□□□□□ -0.02
SS18-225ENST00000585121 DOCK1Q14185 1865 aa14.94□□□□□ -0.02
SS18-225ENST00000585121 C19orf81C9J6K1 198 aa14.93□□□□□ -0.02
SS18-225ENST00000585121 UBE3CQ15386 1083 aa14.93□□□□□ -0.02
SS18-225ENST00000585121 CERKLQ49MI3 558 aaPredicted RBP14.93□□□□□ -0.02
SS18-225ENST00000585121 SLC9C1Q4G0N8 1177 aa14.93□□□□□ -0.02
SS18-225ENST00000585121 SH3D19Q5HYK7 790 aa14.93□□□□□ -0.02
SS18-225ENST00000585121 AMOTL1Q8IY63 956 aa14.93□□□□□ -0.02
SS18-225ENST00000585121 ARMT1Q9H993 441 aa14.93□□□□□ -0.02
SS18-225ENST00000585121 CABP5Q9NP86 173 aa14.93□□□□□ -0.02
SS18-225ENST00000585121 ZBTB21Q9ULJ3 1066 aa14.93□□□□□ -0.02
SS18-225ENST00000585121 ADGRA2Q96PE1 1338 aa14.93□□□□□ -0.02
SS18-225ENST00000585121 MYO5AQ9Y4I1 1855 aaKnown RBP14.93□□□□□ -0.02
SS18-225ENST00000585121 USP17L10C9JJH3 530 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms