RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 TRIB2Q92519 343 aa22.61■■□□□ 1.21
TOP3A-220ENST00000585031 PICALMQ13492 652 aa22.6■■□□□ 1.21
TOP3A-220ENST00000585031 CDH23Q9H251 3354 aa22.6■■□□□ 1.21
TOP3A-220ENST00000585031 ADORA1P30542 326 aa22.59■■□□□ 1.21
TOP3A-220ENST00000585031 SPP2Q13103 211 aa22.59■■□□□ 1.21
TOP3A-220ENST00000585031 ATP2B3Q16720 1220 aa22.59■■□□□ 1.21
TOP3A-220ENST00000585031 MAP3K21Q5TCX8 1036 aa22.59■■□□□ 1.21
TOP3A-220ENST00000585031 ZNF384Q8TF68 577 aa22.59■■□□□ 1.21
TOP3A-220ENST00000585031 SIL1Q9H173 461 aa22.59■■□□□ 1.21
TOP3A-220ENST00000585031 PRDM6Q9NQX0 595 aa22.59■■□□□ 1.21
TOP3A-220ENST00000585031 COL6A1P12109 1028 aa22.58■■□□□ 1.21
TOP3A-220ENST00000585031 PROCA1Q8NCQ7 364 aaPredicted RBP22.58■■□□□ 1.21
TOP3A-220ENST00000585031 ASCC2Q9H1I8 757 aaPredicted RBP22.58■■□□□ 1.21
TOP3A-220ENST00000585031 DENND2AQ9ULE3 1009 aa22.58■■□□□ 1.21
TOP3A-220ENST00000585031 HMGCS2P54868 508 aa22.57■■□□□ 1.2
TOP3A-220ENST00000585031 RHBDL3P58872 404 aa22.57■■□□□ 1.2
TOP3A-220ENST00000585031 CYP2B6P20813 491 aa22.56■■□□□ 1.2
TOP3A-220ENST00000585031 BTDP43251 543 aa22.56■■□□□ 1.2
TOP3A-220ENST00000585031 GCLCP48506 637 aaPredicted RBP22.56■■□□□ 1.2
TOP3A-220ENST00000585031 LRRC26Q2I0M4 334 aa22.56■■□□□ 1.2
TOP3A-220ENST00000585031 FAM163AQ96GL9 167 aaPredicted RBP22.56■■□□□ 1.2
TOP3A-220ENST00000585031 PNMA3Q9UL41 463 aa22.56■■□□□ 1.2
TOP3A-220ENST00000585031 TTC28Q96AY4 2481 aa22.55■■□□□ 1.2
TOP3A-220ENST00000585031 TBC1D12O60347 775 aa22.55■■□□□ 1.2
TOP3A-220ENST00000585031 MDM2Q00987 491 aaPredicted RBP22.55■■□□□ 1.2
TOP3A-220ENST00000585031 ZNF280CQ8ND82 737 aa22.55■■□□□ 1.2
TOP3A-220ENST00000585031 GNL3LQ9NVN8 582 aaKnown RBP22.55■■□□□ 1.2
TOP3A-220ENST00000585031 SIPA1L1O43166 1804 aa22.54■■□□□ 1.2
TOP3A-220ENST00000585031 FRMPD3Q5JV73 1810 aa22.54■■□□□ 1.2
TOP3A-220ENST00000585031 COL2A1P02458 1487 aaPredicted RBP22.54■■□□□ 1.2
TOP3A-220ENST00000585031 PRKAR2AP13861 404 aaKnown RBP22.54■■□□□ 1.2
TOP3A-220ENST00000585031 RASGRF1Q13972 1273 aa22.54■■□□□ 1.2
TOP3A-220ENST00000585031 CCDC102BQ68D86 513 aa22.54■■□□□ 1.2
TOP3A-220ENST00000585031 LHX8Q68G74 356 aa22.54■■□□□ 1.2
TOP3A-220ENST00000585031 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.54■■□□□ 1.2
TOP3A-220ENST00000585031 TXNRD2Q9NNW7 524 aa22.54■■□□□ 1.2
TOP3A-220ENST00000585031 CEP126Q9P2H0 1117 aa22.54■■□□□ 1.2
TOP3A-220ENST00000585031 MORF4L1Q9UBU8 362 aa22.54■■□□□ 1.2
TOP3A-220ENST00000585031 PA2G4Q9UQ80 394 aaKnown RBP22.54■■□□□ 1.2
TOP3A-220ENST00000585031 SEMA3EO15041 775 aa22.53■■□□□ 1.2
TOP3A-220ENST00000585031 POTEEQ6S8J3 1075 aa22.53■■□□□ 1.2
TOP3A-220ENST00000585031 MRS2Q9HD23 443 aa22.53■■□□□ 1.2
TOP3A-220ENST00000585031 ABCF2Q9UG63 623 aa22.53■■□□□ 1.2
TOP3A-220ENST00000585031 MUC3AQ02505 3323 aa22.53■■□□□ 1.2
TOP3A-220ENST00000585031 MROH7-TTC4A0A0A0MT08 1334 aa22.53■■□□□ 1.2
TOP3A-220ENST00000585031 GPR75-ASB3A0A0A6YYF3 556 aa22.52■■□□□ 1.2
TOP3A-220ENST00000585031 ZBTB22O15209 634 aa22.52■■□□□ 1.2
TOP3A-220ENST00000585031 JAG1P78504 1218 aa22.52■■□□□ 1.2
TOP3A-220ENST00000585031 CACNB2Q08289 660 aaPredicted RBP22.52■■□□□ 1.2
TOP3A-220ENST00000585031 SH3D19Q5HYK7 790 aa22.52■■□□□ 1.2
TOP3A-220ENST00000585031 DZIP1Q86YF9 867 aaKnown RBP22.52■■□□□ 1.2
TOP3A-220ENST00000585031 FAM161BQ96MY7 647 aa22.52■■□□□ 1.2
TOP3A-220ENST00000585031 P2RX7Q99572 595 aaKnown RBP22.52■■□□□ 1.2
TOP3A-220ENST00000585031 OSBPL5Q9H0X9 879 aaPredicted RBP22.52■■□□□ 1.2
TOP3A-220ENST00000585031 CIAO1O76071 339 aa22.51■■□□□ 1.19
TOP3A-220ENST00000585031 CCND3P30281 292 aaPredicted RBP22.51■■□□□ 1.19
TOP3A-220ENST00000585031 TIMM10P62072 90 aa22.51■■□□□ 1.19
TOP3A-220ENST00000585031 MECOMQ03112 1051 aa22.51■■□□□ 1.19
TOP3A-220ENST00000585031 CCL14Q16627 93 aa22.51■■□□□ 1.19
TOP3A-220ENST00000585031 SSH1Q8WYL5 1049 aa22.51■■□□□ 1.19
TOP3A-220ENST00000585031 USP6NLQ92738 828 aa22.51■■□□□ 1.19
TOP3A-220ENST00000585031 XRCC5P13010 732 aaKnown RBP22.5■■□□□ 1.19
TOP3A-220ENST00000585031 CAP2P40123 477 aa22.5■■□□□ 1.19
TOP3A-220ENST00000585031 SHROOM1Q2M3G4 852 aaPredicted RBP22.5■■□□□ 1.19
TOP3A-220ENST00000585031 Q3C1V9 767 aa22.5■■□□□ 1.19
TOP3A-220ENST00000585031 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.5■■□□□ 1.19
TOP3A-220ENST00000585031 PTPRCP08575 1304 aa22.5■■□□□ 1.19
TOP3A-220ENST00000585031 MAST2Q6P0Q8 1798 aa22.49■■□□□ 1.19
TOP3A-220ENST00000585031 CDX2Q99626 313 aaPredicted RBP22.49■■□□□ 1.19
TOP3A-220ENST00000585031 USP17L5A8MUK1 530 aa22.48■■□□□ 1.19
TOP3A-220ENST00000585031 NPM3O75607 178 aaKnown RBP22.48■■□□□ 1.19
TOP3A-220ENST00000585031 ZGPATQ8N5A5 531 aaKnown RBP22.48■■□□□ 1.19
TOP3A-220ENST00000585031 PORCNQ9H237 461 aa22.48■■□□□ 1.19
TOP3A-220ENST00000585031 RBPJLQ9UBG7 517 aa22.48■■□□□ 1.19
TOP3A-220ENST00000585031 FBXO3Q9UK99 471 aa22.48■■□□□ 1.19
TOP3A-220ENST00000585031 PABPC4Q13310 644 aaKnown RBP eCLIP22.47■■□□□ 1.19
TOP3A-220ENST00000585031 ZNF697Q5TEC3 545 aa22.47■■□□□ 1.19
TOP3A-220ENST00000585031 NUDT12Q9BQG2 462 aa22.47■■□□□ 1.19
TOP3A-220ENST00000585031 ZNF521Q96K83 1311 aa22.47■■□□□ 1.19
TOP3A-220ENST00000585031 LTBP2Q14767 1821 aa22.47■■□□□ 1.19
TOP3A-220ENST00000585031 CDK5RAP2Q96SN8 1893 aa22.47■■□□□ 1.19
TOP3A-220ENST00000585031 IL15P40933 162 aaPredicted RBP22.46■■□□□ 1.19
TOP3A-220ENST00000585031 MTMR2Q13614 643 aa22.46■■□□□ 1.19
TOP3A-220ENST00000585031 PI16Q6UXB8 463 aa22.46■■□□□ 1.19
TOP3A-220ENST00000585031 SEMA6BQ9H3T3 888 aa22.46■■□□□ 1.19
TOP3A-220ENST00000585031 PDS5AQ29RF7 1337 aaKnown RBP22.46■■□□□ 1.19
TOP3A-220ENST00000585031 HOXA7P31268 230 aaPredicted RBP22.45■■□□□ 1.18
TOP3A-220ENST00000585031 HERVK_113P62684 666 aa22.45■■□□□ 1.18
TOP3A-220ENST00000585031 MORN1Q5T089 497 aa22.45■■□□□ 1.18
TOP3A-220ENST00000585031 TBC1D9Q6ZT07 1266 aa22.45■■□□□ 1.18
TOP3A-220ENST00000585031 SLF2Q8IX21 1173 aa22.45■■□□□ 1.18
TOP3A-220ENST00000585031 TRMT44Q8IYL2 757 aaKnown RBP22.45■■□□□ 1.18
TOP3A-220ENST00000585031 MAFAQ8NHW3 353 aaPredicted RBP22.45■■□□□ 1.18
TOP3A-220ENST00000585031 NSUN4Q96CB9 384 aaKnown RBP22.45■■□□□ 1.18
TOP3A-220ENST00000585031 WDR18Q9BV38 432 aa22.45■■□□□ 1.18
TOP3A-220ENST00000585031 BACE1P56817 501 aa22.44■■□□□ 1.18
TOP3A-220ENST00000585031 GPRC5AQ8NFJ5 357 aa22.44■■□□□ 1.18
TOP3A-220ENST00000585031 XAGE2Q96GT9 111 aa22.44■■□□□ 1.18
TOP3A-220ENST00000585031 LBHD1Q9BQE6 289 aaPredicted RBP22.44■■□□□ 1.18
TOP3A-220ENST00000585031 TBC1D2Q9BYX2 928 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms