RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 CPA4Q9UI42 421 aa20.9■□□□□ 0.94
ITGB4-213ENST00000584939 RAB11FIP3O75154 756 aa20.89■□□□□ 0.93
ITGB4-213ENST00000584939 IFIT2P09913 472 aaKnown RBP20.89■□□□□ 0.93
ITGB4-213ENST00000584939 LACTBP83111 547 aaPredicted RBP20.89■□□□□ 0.93
ITGB4-213ENST00000584939 C17orf99Q6UX52 265 aa20.89■□□□□ 0.93
ITGB4-213ENST00000584939 CCDC84Q86UT8 332 aaPredicted RBP20.89■□□□□ 0.93
ITGB4-213ENST00000584939 MAGEB6Q8N7X4 407 aa20.89■□□□□ 0.93
ITGB4-213ENST00000584939 ARHGAP39Q9C0H5 1083 aa20.89■□□□□ 0.93
ITGB4-213ENST00000584939 HERC5Q9UII4 1024 aaKnown RBP20.89■□□□□ 0.93
ITGB4-213ENST00000584939 FLT1P17948 1338 aa20.88■□□□□ 0.93
ITGB4-213ENST00000584939 TRIM75PA6NK02 468 aa20.88■□□□□ 0.93
ITGB4-213ENST00000584939 MAP3K12Q12852 859 aa20.88■□□□□ 0.93
ITGB4-213ENST00000584939 GADL1Q6ZQY3 521 aa20.88■□□□□ 0.93
ITGB4-213ENST00000584939 MIGA1Q8NAN2 632 aa20.88■□□□□ 0.93
ITGB4-213ENST00000584939 CAP2P40123 477 aa20.87■□□□□ 0.93
ITGB4-213ENST00000584939 RRP1P56182 461 aaKnown RBP20.87■□□□□ 0.93
ITGB4-213ENST00000584939 RRP1BQ14684 758 aaKnown RBP20.87■□□□□ 0.93
ITGB4-213ENST00000584939 PARK7Q99497 189 aaKnown RBP20.87■□□□□ 0.93
ITGB4-213ENST00000584939 PALD1Q9ULE6 856 aa20.87■□□□□ 0.93
ITGB4-213ENST00000584939 MAST2Q6P0Q8 1798 aa20.87■□□□□ 0.93
ITGB4-213ENST00000584939 ADGRA2Q96PE1 1338 aa20.86■□□□□ 0.93
ITGB4-213ENST00000584939 ECM2O94769 699 aaPredicted RBP20.86■□□□□ 0.93
ITGB4-213ENST00000584939 CYP2C8P10632 490 aa20.86■□□□□ 0.93
ITGB4-213ENST00000584939 TTF1Q15361 905 aaPredicted RBP20.86■□□□□ 0.93
ITGB4-213ENST00000584939 FOXP4Q8IVH2 680 aaPredicted RBP20.86■□□□□ 0.93
ITGB4-213ENST00000584939 SAP30BPQ9UHR5 308 aaKnown RBP20.86■□□□□ 0.93
ITGB4-213ENST00000584939 PTCH2Q9Y6C5 1203 aa20.86■□□□□ 0.93
ITGB4-213ENST00000584939 TMED8Q6PL24 325 aaPredicted RBP20.85■□□□□ 0.93
ITGB4-213ENST00000584939 CERS3Q8IU89 383 aa20.85■□□□□ 0.93
ITGB4-213ENST00000584939 ARMC5Q96C12 935 aa20.85■□□□□ 0.93
ITGB4-213ENST00000584939 SLC45A1Q9Y2W3 748 aa20.85■□□□□ 0.93
ITGB4-213ENST00000584939 GNRH1P01148 92 aa20.84■□□□□ 0.93
ITGB4-213ENST00000584939 USP5P45974 858 aa20.84■□□□□ 0.93
ITGB4-213ENST00000584939 SPP2Q13103 211 aa20.84■□□□□ 0.93
ITGB4-213ENST00000584939 METTL16Q86W50 562 aaKnown RBP20.84■□□□□ 0.93
ITGB4-213ENST00000584939 CRACR2BQ8N4Y2 399 aaPredicted RBP20.84■□□□□ 0.93
ITGB4-213ENST00000584939 ZNF280CQ8ND82 737 aa20.84■□□□□ 0.93
ITGB4-213ENST00000584939 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.84■□□□□ 0.93
ITGB4-213ENST00000584939 DNAJC2Q99543 621 aaKnown RBP20.84■□□□□ 0.93
ITGB4-213ENST00000584939 TRIM34Q9BYJ4 488 aa20.84■□□□□ 0.93
ITGB4-213ENST00000584939 TBC1D2Q9BYX2 928 aa20.84■□□□□ 0.93
ITGB4-213ENST00000584939 USP17L5A8MUK1 530 aa20.83■□□□□ 0.93
ITGB4-213ENST00000584939 GOLIM4O00461 696 aa20.83■□□□□ 0.93
ITGB4-213ENST00000584939 HLA-DOAP06340 250 aa20.83■□□□□ 0.93
ITGB4-213ENST00000584939 BCRP11274 1271 aa20.83■□□□□ 0.93
ITGB4-213ENST00000584939 PSMC4P43686 418 aa20.83■□□□□ 0.93
ITGB4-213ENST00000584939 SLC4A8Q2Y0W8 1093 aa20.83■□□□□ 0.93
ITGB4-213ENST00000584939 DNAJC18Q9H819 358 aa20.83■□□□□ 0.93
ITGB4-213ENST00000584939 DOCK1Q14185 1865 aa20.83■□□□□ 0.92
ITGB4-213ENST00000584939 MYO5AQ9Y4I1 1855 aaKnown RBP20.82■□□□□ 0.92
ITGB4-213ENST00000584939 CTGFP29279 349 aa20.82■□□□□ 0.92
ITGB4-213ENST00000584939 SLC9C1Q4G0N8 1177 aa20.82■□□□□ 0.92
ITGB4-213ENST00000584939 SLC9C2Q5TAH2 1124 aa20.82■□□□□ 0.92
ITGB4-213ENST00000584939 NBPF11Q86T75 865 aa20.82■□□□□ 0.92
ITGB4-213ENST00000584939 TRIM47Q96LD4 638 aa20.82■□□□□ 0.92
ITGB4-213ENST00000584939 AGTPBP1Q9UPW5 1226 aa20.82■□□□□ 0.92
ITGB4-213ENST00000584939 FMNL1O95466 1100 aaPredicted RBP20.81■□□□□ 0.92
ITGB4-213ENST00000584939 PDE6AP16499 860 aa20.81■□□□□ 0.92
ITGB4-213ENST00000584939 PRMT2P55345 433 aa20.81■□□□□ 0.92
ITGB4-213ENST00000584939 JAG1P78504 1218 aa20.81■□□□□ 0.92
ITGB4-213ENST00000584939 TREML2Q5T2D2 321 aa20.81■□□□□ 0.92
ITGB4-213ENST00000584939 PROCA1Q8NCQ7 364 aaPredicted RBP20.81■□□□□ 0.92
ITGB4-213ENST00000584939 RIOK1Q9BRS2 568 aaKnown RBP20.81■□□□□ 0.92
ITGB4-213ENST00000584939 AS3MTQ9HBK9 375 aa20.81■□□□□ 0.92
ITGB4-213ENST00000584939 MAGEB6P1A0A0J9YX57 407 aa20.8■□□□□ 0.92
ITGB4-213ENST00000584939 POTEFA5A3E0 1075 aa20.8■□□□□ 0.92
ITGB4-213ENST00000584939 ASNSP08243 561 aa20.8■□□□□ 0.92
ITGB4-213ENST00000584939 HOXD10P28358 340 aa20.8■□□□□ 0.92
ITGB4-213ENST00000584939 HMGCS2P54868 508 aa20.8■□□□□ 0.92
ITGB4-213ENST00000584939 SMCR8Q8TEV9 937 aaPredicted RBP20.8■□□□□ 0.92
ITGB4-213ENST00000584939 EDC3Q96F86 508 aaKnown RBP20.8■□□□□ 0.92
ITGB4-213ENST00000584939 ZNF333Q96JL9 665 aa20.8■□□□□ 0.92
ITGB4-213ENST00000584939 LRRCC1Q9C099 1032 aa20.8■□□□□ 0.92
ITGB4-213ENST00000584939 BOLA2Q9H3K6 86 aa20.8■□□□□ 0.92
ITGB4-213ENST00000584939 SRRDQ9UH36 339 aa20.8■□□□□ 0.92
ITGB4-213ENST00000584939 ATP5JP18859 108 aa20.79■□□□□ 0.92
ITGB4-213ENST00000584939 OSBPP22059 807 aa20.79■□□□□ 0.92
ITGB4-213ENST00000584939 WDR18Q9BV38 432 aa20.79■□□□□ 0.92
ITGB4-213ENST00000584939 ZNF532Q9HCE3 1301 aa20.78■□□□□ 0.92
ITGB4-213ENST00000584939 PHIPQ8WWQ0 1821 aa20.78■□□□□ 0.92
ITGB4-213ENST00000584939 SMARCA5O60264 1052 aaPredicted RBP20.78■□□□□ 0.92
ITGB4-213ENST00000584939 GDF11O95390 407 aa20.78■□□□□ 0.92
ITGB4-213ENST00000584939 FCGRTP55899 365 aa20.78■□□□□ 0.92
ITGB4-213ENST00000584939 SHROOM1Q2M3G4 852 aaPredicted RBP20.78■□□□□ 0.92
ITGB4-213ENST00000584939 SH3D19Q5HYK7 790 aa20.78■□□□□ 0.92
ITGB4-213ENST00000584939 SH3TC2Q8TF17 1288 aa20.78■□□□□ 0.92
ITGB4-213ENST00000584939 TMEM106CQ9BVX2 250 aa20.78■□□□□ 0.92
ITGB4-213ENST00000584939 GINM1Q9NU53 330 aa20.78■□□□□ 0.92
ITGB4-213ENST00000584939 PAG1Q9NWQ8 432 aa20.78■□□□□ 0.92
ITGB4-213ENST00000584939 PNMA3Q9UL41 463 aa20.78■□□□□ 0.92
ITGB4-213ENST00000584939 ZSWIM8A7E2V4 1837 aa20.77■□□□□ 0.92
ITGB4-213ENST00000584939 TCRBV5S4A2TA0A5A2 114 aa20.77■□□□□ 0.92
ITGB4-213ENST00000584939 TTC6Q86TZ1 520 aa20.77■□□□□ 0.92
ITGB4-213ENST00000584939 HAUS7Q99871 368 aa20.77■□□□□ 0.92
ITGB4-213ENST00000584939 CRNKL1Q9BZJ0 848 aaKnown RBP20.77■□□□□ 0.92
ITGB4-213ENST00000584939 SERPINB13Q9UIV8 391 aa20.77■□□□□ 0.92
ITGB4-213ENST00000584939 ZBTB21Q9ULJ3 1066 aa20.77■□□□□ 0.92
ITGB4-213ENST00000584939 SIPA1L1O43166 1804 aa20.76■□□□□ 0.91
ITGB4-213ENST00000584939 MYCP01106 439 aaPredicted RBP20.76■□□□□ 0.91
ITGB4-213ENST00000584939 BACE1P56817 501 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms