RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 CCND3P30281 292 aaPredicted RBP17.65■□□□□ 0.42
CSNK1D-224ENST00000584672 BTDP43251 543 aa17.65■□□□□ 0.42
CSNK1D-224ENST00000584672 MAP3K21Q5TCX8 1036 aa17.65■□□□□ 0.42
CSNK1D-224ENST00000584672 DZIP1Q86YF9 867 aaKnown RBP17.65■□□□□ 0.42
CSNK1D-224ENST00000584672 GNL3LQ9NVN8 582 aaKnown RBP17.65■□□□□ 0.42
CSNK1D-224ENST00000584672 GAKO14976 1311 aa17.65■□□□□ 0.42
CSNK1D-224ENST00000584672 FRMPD3Q5JV73 1810 aa17.65■□□□□ 0.42
CSNK1D-224ENST00000584672 COL6A1P12109 1028 aa17.64■□□□□ 0.41
CSNK1D-224ENST00000584672 RFX5P48382 616 aaPredicted RBP17.64■□□□□ 0.41
CSNK1D-224ENST00000584672 CACNB2Q08289 660 aaPredicted RBP17.64■□□□□ 0.41
CSNK1D-224ENST00000584672 PABPC4Q13310 644 aaKnown RBP eCLIP17.64■□□□□ 0.415e-8■□□□□ 8
CSNK1D-224ENST00000584672 CCL14Q16627 93 aa17.64■□□□□ 0.41
CSNK1D-224ENST00000584672 ZNF697Q5TEC3 545 aa17.64■□□□□ 0.41
CSNK1D-224ENST00000584672 ATG9AQ7Z3C6 839 aa17.64■□□□□ 0.41
CSNK1D-224ENST00000584672 WDR63Q8IWG1 891 aa17.64■□□□□ 0.41
CSNK1D-224ENST00000584672 ZNF280CQ8ND82 737 aa17.64■□□□□ 0.41
CSNK1D-224ENST00000584672 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.64■□□□□ 0.417e-6■□□□□ 9.9
CSNK1D-224ENST00000584672 ABCF2Q9UG63 623 aa17.64■□□□□ 0.41
CSNK1D-224ENST00000584672 MAST2Q6P0Q8 1798 aa17.63■□□□□ 0.41
CSNK1D-224ENST00000584672 COL2A1P02458 1487 aaPredicted RBP17.63■□□□□ 0.41
CSNK1D-224ENST00000584672 ZKSCAN1P17029 563 aaPredicted RBP17.63■□□□□ 0.41
CSNK1D-224ENST00000584672 ADORA1P30542 326 aa17.63■□□□□ 0.41
CSNK1D-224ENST00000584672 FAM109BQ6ICB4 259 aaPredicted RBP17.63■□□□□ 0.41
CSNK1D-224ENST00000584672 LBHD1Q9BQE6 289 aaPredicted RBP17.63■□□□□ 0.41
CSNK1D-224ENST00000584672 DENND2AQ9ULE3 1009 aa17.63■□□□□ 0.41
CSNK1D-224ENST00000584672 SALL1Q9NSC2 1324 aa17.63■□□□□ 0.41
CSNK1D-224ENST00000584672 SPTBN5Q9NRC6 3674 aaKnown RBP17.63■□□□□ 0.41
CSNK1D-224ENST00000584672 IRX3P78415 501 aaPredicted RBP17.62■□□□□ 0.41
CSNK1D-224ENST00000584672 RRP1BQ14684 758 aaKnown RBP17.62■□□□□ 0.41
CSNK1D-224ENST00000584672 MAFAQ8NHW3 353 aaPredicted RBP17.62■□□□□ 0.41
CSNK1D-224ENST00000584672 CDX2Q99626 313 aaPredicted RBP17.62■□□□□ 0.41
CSNK1D-224ENST00000584672 NUDT12Q9BQG2 462 aa17.62■□□□□ 0.41
CSNK1D-224ENST00000584672 PRDM6Q9NQX0 595 aa17.62■□□□□ 0.41
CSNK1D-224ENST00000584672 ATN1P54259 1190 aaPredicted RBP17.61■□□□□ 0.41
CSNK1D-224ENST00000584672 LHX8Q68G74 356 aa17.61■□□□□ 0.41
CSNK1D-224ENST00000584672 USP44Q9H0E7 712 aa17.61■□□□□ 0.41
CSNK1D-224ENST00000584672 TXNRD2Q9NNW7 524 aa17.61■□□□□ 0.41
CSNK1D-224ENST00000584672 MORF4L1Q9UBU8 362 aa17.61■□□□□ 0.41
CSNK1D-224ENST00000584672 PDE3AQ14432 1141 aa17.6■□□□□ 0.41
CSNK1D-224ENST00000584672 MYLIPQ8WY64 445 aa17.6■□□□□ 0.41
CSNK1D-224ENST00000584672 P2RX7Q99572 595 aaKnown RBP17.6■□□□□ 0.41
CSNK1D-224ENST00000584672 SENP6Q9GZR1 1112 aaPredicted RBP17.6■□□□□ 0.41
CSNK1D-224ENST00000584672 OSBPL5Q9H0X9 879 aaPredicted RBP17.6■□□□□ 0.41
CSNK1D-224ENST00000584672 CEP126Q9P2H0 1117 aa17.6■□□□□ 0.41
CSNK1D-224ENST00000584672 MROH7-TTC4A0A0A0MT08 1334 aa17.6■□□□□ 0.41
CSNK1D-224ENST00000584672 DNAH12Q6ZR08 3092 aa17.6■□□□□ 0.41
CSNK1D-224ENST00000584672 LTBP2Q14767 1821 aa17.59■□□□□ 0.41
CSNK1D-224ENST00000584672 USP17L5A8MUK1 530 aa17.59■□□□□ 0.41
CSNK1D-224ENST00000584672 MTMR2Q13614 643 aa17.59■□□□□ 0.41
CSNK1D-224ENST00000584672 RASGRF1Q13972 1273 aa17.59■□□□□ 0.41
CSNK1D-224ENST00000584672 CCAR1Q8IX12 1150 aaKnown RBP17.59■□□□□ 0.41
CSNK1D-224ENST00000584672 ZGPATQ8N5A5 531 aaKnown RBP17.59■□□□□ 0.41
CSNK1D-224ENST00000584672 SOCS4Q8WXH5 440 aa17.59■□□□□ 0.41
CSNK1D-224ENST00000584672 PAGR1Q9BTK6 254 aa17.59■□□□□ 0.41
CSNK1D-224ENST00000584672 PORCNQ9H237 461 aa17.59■□□□□ 0.41
CSNK1D-224ENST00000584672 PRUNE2Q8WUY3 3088 aa17.58■□□□□ 0.41
CSNK1D-224ENST00000584672 SEMA3EO15041 775 aa17.58■□□□□ 0.4
CSNK1D-224ENST00000584672 TBC1D12O60347 775 aa17.58■□□□□ 0.4
CSNK1D-224ENST00000584672 CAP2P40123 477 aa17.58■□□□□ 0.4
CSNK1D-224ENST00000584672 RHBDL3P58872 404 aa17.58■□□□□ 0.4
CSNK1D-224ENST00000584672 HERVK_113P62684 666 aa17.58■□□□□ 0.4
CSNK1D-224ENST00000584672 SH3D19Q5HYK7 790 aa17.58■□□□□ 0.4
CSNK1D-224ENST00000584672 CCDC102BQ68D86 513 aa17.58■□□□□ 0.4
CSNK1D-224ENST00000584672 SLF2Q8IX21 1173 aa17.58■□□□□ 0.4
CSNK1D-224ENST00000584672 NDUFB9Q9Y6M9 179 aa17.58■□□□□ 0.4
CSNK1D-224ENST00000584672 XRCC5P13010 732 aaKnown RBP17.57■□□□□ 0.4
CSNK1D-224ENST00000584672 MECOMQ03112 1051 aa17.57■□□□□ 0.4
CSNK1D-224ENST00000584672 SHROOM1Q2M3G4 852 aaPredicted RBP17.57■□□□□ 0.4
CSNK1D-224ENST00000584672 NCBP3Q53F19 620 aaKnown RBP17.57■□□□□ 0.4
CSNK1D-224ENST00000584672 MRPL50Q8N5N7 158 aaKnown RBP17.57■□□□□ 0.4
CSNK1D-224ENST00000584672 GPRC5AQ8NFJ5 357 aa17.57■□□□□ 0.4
CSNK1D-224ENST00000584672 CWC22Q9HCG8 908 aaKnown RBP17.57■□□□□ 0.4
CSNK1D-224ENST00000584672 PA2G4Q9UQ80 394 aaKnown RBP17.57■□□□□ 0.4
CSNK1D-224ENST00000584672 TTC28Q96AY4 2481 aa17.56■□□□□ 0.4
CSNK1D-224ENST00000584672 RGS2P41220 211 aa17.56■□□□□ 0.4
CSNK1D-224ENST00000584672 SHHQ15465 462 aa17.56■□□□□ 0.4
CSNK1D-224ENST00000584672 Q3C1V9 767 aa17.56■□□□□ 0.4
CSNK1D-224ENST00000584672 C9orf50Q5SZB4 431 aa17.56■□□□□ 0.4
CSNK1D-224ENST00000584672 GPR142Q7Z601 462 aa17.56■□□□□ 0.4
CSNK1D-224ENST00000584672 TRMT44Q8IYL2 757 aaKnown RBP17.56■□□□□ 0.4
CSNK1D-224ENST00000584672 ZNF384Q8TF68 577 aa17.56■□□□□ 0.4
CSNK1D-224ENST00000584672 SEMA6BQ9H3T3 888 aa17.56■□□□□ 0.4
CSNK1D-224ENST00000584672 AS3MTQ9HBK9 375 aa17.56■□□□□ 0.4
CSNK1D-224ENST00000584672 TMOD4Q9NZQ9 345 aa17.56■□□□□ 0.4
CSNK1D-224ENST00000584672 PRKAG2Q9UGJ0 569 aa17.56■□□□□ 0.4
CSNK1D-224ENST00000584672 SIPA1L1O43166 1804 aa17.56■□□□□ 0.4
CSNK1D-224ENST00000584672 GPR75-ASB3A0A0A6YYF3 556 aa17.55■□□□□ 0.4
CSNK1D-224ENST00000584672 MAPK4P31152 587 aa17.55■□□□□ 0.4
CSNK1D-224ENST00000584672 RTP1P59025 263 aa17.55■□□□□ 0.4
CSNK1D-224ENST00000584672 JAG1P78504 1218 aa17.55■□□□□ 0.4
CSNK1D-224ENST00000584672 SPTY2D1Q68D10 685 aaPredicted RBP17.55■□□□□ 0.4
CSNK1D-224ENST00000584672 USP6NLQ92738 828 aa17.55■□□□□ 0.4
CSNK1D-224ENST00000584672 FAM163AQ96GL9 167 aaPredicted RBP17.55■□□□□ 0.4
CSNK1D-224ENST00000584672 APBA2Q99767 749 aa17.55■□□□□ 0.4
CSNK1D-224ENST00000584672 TBC1D2Q9BYX2 928 aa17.55■□□□□ 0.4
CSNK1D-224ENST00000584672 RBPJLQ9UBG7 517 aa17.55■□□□□ 0.4
CSNK1D-224ENST00000584672 ATP11BQ9Y2G3 1177 aa17.55■□□□□ 0.4
CSNK1D-224ENST00000584672 CNGA1P29973 690 aa17.54■□□□□ 0.4
CSNK1D-224ENST00000584672 TIMM10P62072 90 aa17.54■□□□□ 0.4
CSNK1D-224ENST00000584672 ERVK-9P63128 1117 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms