RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 ANP32CO43423 234 aa9.79□□□□□ -0.84
SMCHD1-210ENST00000583800 FRAT2O75474 233 aaPredicted RBP9.79□□□□□ -0.84
SMCHD1-210ENST00000583800 CAVIN4Q5BKX8 364 aa9.79□□□□□ -0.84
SMCHD1-210ENST00000583800 HABP4Q5JVS0 413 aaKnown RBP9.79□□□□□ -0.84
SMCHD1-210ENST00000583800 FAM9BQ8IZU0 186 aa9.79□□□□□ -0.84
SMCHD1-210ENST00000583800 VGLL2Q8N8G2 317 aa9.79□□□□□ -0.84
SMCHD1-210ENST00000583800 TBC1D22AQ8WUA7 517 aa9.79□□□□□ -0.84
SMCHD1-210ENST00000583800 TEKT1Q969V4 418 aa9.79□□□□□ -0.84
SMCHD1-210ENST00000583800 CLUAP1Q96AJ1 413 aa9.79□□□□□ -0.84
SMCHD1-210ENST00000583800 ZNF333Q96JL9 665 aa9.79□□□□□ -0.84
SMCHD1-210ENST00000583800 WRNIP1Q96S55 665 aa9.79□□□□□ -0.84
SMCHD1-210ENST00000583800 ARHGAP39Q9C0H5 1083 aa9.79□□□□□ -0.84
SMCHD1-210ENST00000583800 MYH2Q9UKX2 1941 aa9.78□□□□□ -0.84
SMCHD1-210ENST00000583800 PDE8BO95263 885 aa9.78□□□□□ -0.84
SMCHD1-210ENST00000583800 MYCP01106 439 aaPredicted RBP9.78□□□□□ -0.84
SMCHD1-210ENST00000583800 HDLBPQ00341 1268 aaKnown RBP9.78□□□□□ -0.84
SMCHD1-210ENST00000583800 SLC9C1Q4G0N8 1177 aa9.78□□□□□ -0.84
SMCHD1-210ENST00000583800 PARP9Q8IXQ6 854 aa9.78□□□□□ -0.84
SMCHD1-210ENST00000583800 ZKSCAN4Q969J2 545 aaPredicted RBP9.78□□□□□ -0.84
SMCHD1-210ENST00000583800 ZFRQ96KR1 1074 aaKnown RBP9.78□□□□□ -0.84
SMCHD1-210ENST00000583800 TMOD2Q9NZR1 351 aa9.78□□□□□ -0.84
SMCHD1-210ENST00000583800 RPAP1Q9BWH6 1393 aaPredicted RBP9.77□□□□□ -0.84
SMCHD1-210ENST00000583800 BTBD19C9JJ37 291 aa9.77□□□□□ -0.85
SMCHD1-210ENST00000583800 IRF6O14896 467 aa9.77□□□□□ -0.85
SMCHD1-210ENST00000583800 APOBEC3HQ6NTF7 200 aaKnown RBP9.77□□□□□ -0.85
SMCHD1-210ENST00000583800 ERO1BQ86YB8 467 aa9.77□□□□□ -0.85
SMCHD1-210ENST00000583800 SH3TC2Q8TF17 1288 aa9.77□□□□□ -0.85
SMCHD1-210ENST00000583800 ZDHHC15Q96MV8 337 aa9.77□□□□□ -0.85
SMCHD1-210ENST00000583800 TRAIPQ9BWF2 469 aa9.77□□□□□ -0.85
SMCHD1-210ENST00000583800 KIAA1468Q9P260 1216 aa9.77□□□□□ -0.85
SMCHD1-210ENST00000583800 PTPRFP10586 1907 aa9.77□□□□□ -0.85
SMCHD1-210ENST00000583800 MAST3O60307 1309 aa9.77□□□□□ -0.85
SMCHD1-210ENST00000583800 ZNF521Q96K83 1311 aa9.77□□□□□ -0.85
SMCHD1-210ENST00000583800 CEP290O15078 2479 aa9.76□□□□□ -0.85
SMCHD1-210ENST00000583800 TLR2O60603 784 aa9.76□□□□□ -0.85
SMCHD1-210ENST00000583800 CETPP11597 493 aa9.76□□□□□ -0.85
SMCHD1-210ENST00000583800 FGFR2P21802 821 aa9.76□□□□□ -0.85
SMCHD1-210ENST00000583800 INPP5BP32019 993 aa9.76□□□□□ -0.85
SMCHD1-210ENST00000583800 LACTBP83111 547 aaPredicted RBP9.76□□□□□ -0.85
SMCHD1-210ENST00000583800 MAP2K5Q13163 448 aa9.76□□□□□ -0.85
SMCHD1-210ENST00000583800 ARHGEF6Q15052 776 aa9.76□□□□□ -0.85
SMCHD1-210ENST00000583800 PUM3Q15397 648 aaKnown RBP9.76□□□□□ -0.85
SMCHD1-210ENST00000583800 SLC4A8Q2Y0W8 1093 aa9.76□□□□□ -0.85
SMCHD1-210ENST00000583800 MIGA2Q7L4E1 593 aa9.76□□□□□ -0.85
SMCHD1-210ENST00000583800 FAM83AQ86UY5 434 aa9.76□□□□□ -0.85
SMCHD1-210ENST00000583800 DOCK1Q14185 1865 aa9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 LCE2BO14633 110 aa9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 WDHD1O75717 1129 aaPredicted RBP9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 IFIT1P09914 478 aaKnown RBP9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 RFX5P48382 616 aaPredicted RBP9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 PPIL2Q13356 520 aa9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 SNAPC2Q13487 334 aa9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 KIF22Q14807 665 aa9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 LAPTM4AQ15012 233 aa9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 DCAF15Q66K64 600 aa9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 HHIPL2Q6UWX4 724 aa9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 NBPF11Q86T75 865 aa9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 MRIQ9BWK5 157 aa9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 ZNF341Q9BYN7 854 aa9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 USP44Q9H0E7 712 aa9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 ZCCHC17Q9NP64 241 aaKnown RBP9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 PTPRCP08575 1304 aa9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 KIF16BQ96L93 1317 aa9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 PHIPQ8WWQ0 1821 aa9.75□□□□□ -0.85
SMCHD1-210ENST00000583800 EYA2O00167 538 aa9.74□□□□□ -0.85
SMCHD1-210ENST00000583800 SLC5A1P13866 664 aa9.74□□□□□ -0.85
SMCHD1-210ENST00000583800 CTGFP29279 349 aa9.74□□□□□ -0.85
SMCHD1-210ENST00000583800 PPATQ06203 517 aa9.74□□□□□ -0.85
SMCHD1-210ENST00000583800 TCP10Q12799 353 aa9.74□□□□□ -0.85
SMCHD1-210ENST00000583800 NFIAQ12857 509 aa9.74□□□□□ -0.85
SMCHD1-210ENST00000583800 DIXDC1Q155Q3 683 aa9.74□□□□□ -0.85
SMCHD1-210ENST00000583800 FKBP1CQ5VVH2 108 aa9.74□□□□□ -0.85
SMCHD1-210ENST00000583800 TYW1BQ6NUM6 668 aa9.74□□□□□ -0.85
SMCHD1-210ENST00000583800 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.74□□□□□ -0.85
SMCHD1-210ENST00000583800 SSH1Q8WYL5 1049 aa9.74□□□□□ -0.85
SMCHD1-210ENST00000583800 HOOK2Q96ED9 719 aa9.74□□□□□ -0.85
SMCHD1-210ENST00000583800 CPA4Q9UI42 421 aa9.74□□□□□ -0.85
SMCHD1-210ENST00000583800 SUGT1Q9Y2Z0 365 aa9.74□□□□□ -0.85
SMCHD1-210ENST00000583800 DAGLAQ9Y4D2 1042 aa9.74□□□□□ -0.85
SMCHD1-210ENST00000583800 TRIOBPQ9H2D6 2365 aa9.73□□□□□ -0.85
SMCHD1-210ENST00000583800 PDHXO00330 501 aa9.73□□□□□ -0.85
SMCHD1-210ENST00000583800 PRDX5P30044 214 aa9.73□□□□□ -0.85
SMCHD1-210ENST00000583800 ZEB1P37275 1124 aaPredicted RBP9.73□□□□□ -0.85
SMCHD1-210ENST00000583800 FXR1P51114 621 aaKnown RBP eCLIP9.73□□□□□ -0.85
SMCHD1-210ENST00000583800 MTFR1Q15390 333 aa9.73□□□□□ -0.85
SMCHD1-210ENST00000583800 CDC42EP5Q6NZY7 148 aa9.73□□□□□ -0.85
SMCHD1-210ENST00000583800 C17orf99Q6UX52 265 aa9.73□□□□□ -0.85
SMCHD1-210ENST00000583800 WDR66Q8TBY9 1149 aa9.73□□□□□ -0.85
SMCHD1-210ENST00000583800 FAM151AQ8WW52 585 aa9.73□□□□□ -0.85
SMCHD1-210ENST00000583800 LPIN2Q92539 896 aa9.73□□□□□ -0.85
SMCHD1-210ENST00000583800 ADGRA2Q96PE1 1338 aa9.73□□□□□ -0.85
SMCHD1-210ENST00000583800 DOCK3Q8IZD9 2030 aa9.73□□□□□ -0.85
SMCHD1-210ENST00000583800 ATAD5Q96QE3 1844 aa9.72□□□□□ -0.85
SMCHD1-210ENST00000583800 OSBPP22059 807 aa9.72□□□□□ -0.85
SMCHD1-210ENST00000583800 PSMC4P43686 418 aa9.72□□□□□ -0.85
SMCHD1-210ENST00000583800 MOGSQ13724 837 aa9.72□□□□□ -0.85
SMCHD1-210ENST00000583800 ATG9AQ7Z3C6 839 aa9.72□□□□□ -0.85
SMCHD1-210ENST00000583800 ANKRD23Q86SG2 305 aa9.72□□□□□ -0.85
SMCHD1-210ENST00000583800 SHISA4Q96DD7 197 aa9.72□□□□□ -0.85
SMCHD1-210ENST00000583800 SIL1Q9H173 461 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms