RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 PARP10Q53GL7 1025 aa12.38□□□□□ -0.43
CDK5RAP3-225ENST00000582482 DIS3L2Q8IYB7 885 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-225ENST00000582482 RIOK1Q9BRS2 568 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-225ENST00000582482 POLR3EQ9NVU0 708 aa12.38□□□□□ -0.43
CDK5RAP3-225ENST00000582482 COL22A1Q8NFW1 1626 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-225ENST00000582482 USP17L12C9JPN9 530 aa12.38□□□□□ -0.43
CDK5RAP3-225ENST00000582482 USP17L21D6R901 530 aa12.38□□□□□ -0.43
CDK5RAP3-225ENST00000582482 MECOMQ03112 1051 aa12.38□□□□□ -0.43
CDK5RAP3-225ENST00000582482 SSRP1Q08945 709 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-225ENST00000582482 HSP90AA2PQ14568 343 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-225ENST00000582482 NBPF11Q86T75 865 aa12.38□□□□□ -0.43
CDK5RAP3-225ENST00000582482 NBPF5PQ86XG9 351 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-225ENST00000582482 ZNF654Q8IZM8 581 aa12.38□□□□□ -0.43
CDK5RAP3-225ENST00000582482 DPF2Q92785 391 aa12.38□□□□□ -0.43
CDK5RAP3-225ENST00000582482 KIAA1468Q9P260 1216 aa12.38□□□□□ -0.43
CDK5RAP3-225ENST00000582482 PDE4BQ07343 736 aa12.37□□□□□ -0.43
CDK5RAP3-225ENST00000582482 NFIXQ14938 502 aa12.37□□□□□ -0.43
CDK5RAP3-225ENST00000582482 ENAHQ8N8S7 591 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-225ENST00000582482 ZNF592Q92610 1267 aa12.37□□□□□ -0.43
CDK5RAP3-225ENST00000582482 CACNA1SQ13698 1873 aa12.37□□□□□ -0.43
CDK5RAP3-225ENST00000582482 SMC2O95347 1197 aa12.37□□□□□ -0.43
CDK5RAP3-225ENST00000582482 SLC3A2P08195 630 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-225ENST00000582482 SLC39A14Q15043 492 aa12.37□□□□□ -0.43
CDK5RAP3-225ENST00000582482 DIXDC1Q155Q3 683 aa12.37□□□□□ -0.43
CDK5RAP3-225ENST00000582482 CDC5LQ99459 802 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-225ENST00000582482 TPM2P07951 284 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 USP17L8P0C7I0 530 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 BMP6P22004 513 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 SYKP43405 635 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 METTL16Q86W50 562 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 TRMT44Q8IYL2 757 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 SLC44A5Q8NCS7 719 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 KCNG4Q8TDN1 519 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 STAG1Q8WVM7 1258 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 STAMQ92783 540 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 ARHGEF1Q92888 912 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 DYNLL2Q96FJ2 89 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 TMEM87BQ96K49 555 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 UBAC1Q9BSL1 405 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 CABP5Q9NP86 173 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 IFNKQ9P0W0 207 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 BCORQ6W2J9 1755 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 RIOK3O14730 519 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 FMNL1O95466 1100 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 CTR9Q6PD62 1173 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 SGMS1Q86VZ5 419 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 ZNF710Q8N1W2 664 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 XPO4Q9C0E2 1151 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 CPVLQ9H3G5 476 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 SPTLC3Q9NUV7 552 aa12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 ZNF219Q9P2Y4 722 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 CCNL1Q9UK58 526 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-225ENST00000582482 UBAP1LF5GYI3 381 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 YEATS4O95619 227 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 TRIM29Q14134 588 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 ALX1Q15699 326 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 BRAPQ7Z569 592 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 FANCBQ8NB91 859 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 NACAP1Q9BZK3 213 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 HSD3B7Q9H2F3 369 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 V9GY48 417 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 LAMB2P55268 1798 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 A0A087X0B3 334 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 ZNF804BA4D1E1 1349 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 TMEM232C9JQI7 657 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 PDIA4P13667 645 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 SEC23AQ15436 765 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 CEP57L1Q8IYX8 460 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 LTBP4Q8N2S1 1624 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 CRACR2BQ8N4Y2 399 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 SETDB2Q96T68 719 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 ANO10Q9NW15 660 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 BSDC1Q9NW68 430 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 ZNF652Q9Y2D9 606 aa12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 THRAP3Q9Y2W1 955 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-225ENST00000582482 A0A1B0GUL6 1792 aa12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 COL5A3P25940 1745 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 A0A1W2PQ27 194 aa12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 A0A1W2PQ64 194 aa12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 A0A1W2PQD8 194 aa12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 MMP1P03956 469 aa12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 SLURP2P0DP57 97 aa12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 RPS8P62241 208 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 NCAPHQ15003 741 aa12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 NOSTRINQ8IVI9 506 aa12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 NSUN4Q96CB9 384 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.34□□□□□ -0.434e-8■□□□□ 10.4
CDK5RAP3-225ENST00000582482 SAP30BPQ9UHR5 308 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 V9GYY5 206 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 PNPLA7Q6ZV29 1317 aa12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 LIFRP42702 1097 aa12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 PKN1Q16512 942 aa12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 CAVIN4Q5BKX8 364 aa12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 OLFM4Q6UX06 510 aa12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 TMC6Q7Z403 805 aa12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 EPSTI1Q96J88 318 aa12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 KRT23Q9C075 422 aa12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 LRRC4BQ9NT99 713 aa12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 TNRC6CQ9HCJ0 1690 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-225ENST00000582482 WDR19Q8NEZ3 1342 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms