RNA–Protein interactions for RNA: ENST00000582100.1

CCDC57-215, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-215ENST00000582100 MYO5AQ9Y4I1 1855 aaKnown RBP18.75■□□□□ 0.59
CCDC57-215ENST00000582100 FAM196BA6NMK8 535 aa18.75■□□□□ 0.59
CCDC57-215ENST00000582100 HMMRO75330 724 aa18.75■□□□□ 0.59
CCDC57-215ENST00000582100 SLC9C1Q4G0N8 1177 aa18.75■□□□□ 0.59
CCDC57-215ENST00000582100 TMED8Q6PL24 325 aaPredicted RBP18.75■□□□□ 0.59
CCDC57-215ENST00000582100 GADL1Q6ZQY3 521 aa18.75■□□□□ 0.59
CCDC57-215ENST00000582100 TGFBRAP1Q8WUH2 860 aa18.75■□□□□ 0.59
CCDC57-215ENST00000582100 ZNF333Q96JL9 665 aa18.75■□□□□ 0.59
CCDC57-215ENST00000582100 TBC1D2Q9BYX2 928 aa18.75■□□□□ 0.59
CCDC57-215ENST00000582100 POTEFA5A3E0 1075 aa18.74■□□□□ 0.59
CCDC57-215ENST00000582100 TRIM75PA6NK02 468 aa18.74■□□□□ 0.59
CCDC57-215ENST00000582100 IDH1O75874 414 aaKnown RBP18.74■□□□□ 0.59
CCDC57-215ENST00000582100 CYP2C8P10632 490 aa18.74■□□□□ 0.59
CCDC57-215ENST00000582100 BCRP11274 1271 aa18.74■□□□□ 0.59
CCDC57-215ENST00000582100 CYP7A1P22680 504 aa18.74■□□□□ 0.59
CCDC57-215ENST00000582100 CAP2P40123 477 aa18.74■□□□□ 0.59
CCDC57-215ENST00000582100 PSMC4P43686 418 aa18.74■□□□□ 0.59
CCDC57-215ENST00000582100 METTL16Q86W50 562 aaKnown RBP18.74■□□□□ 0.59
CCDC57-215ENST00000582100 CERS3Q8IU89 383 aa18.74■□□□□ 0.59
CCDC57-215ENST00000582100 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.74■□□□□ 0.59
CCDC57-215ENST00000582100 PTPRFP10586 1907 aa18.74■□□□□ 0.59
CCDC57-215ENST00000582100 FLT1P17948 1338 aa18.74■□□□□ 0.59
CCDC57-215ENST00000582100 ZSWIM8A7E2V4 1837 aa18.73■□□□□ 0.59
CCDC57-215ENST00000582100 HOXD10P28358 340 aa18.73■□□□□ 0.59
CCDC57-215ENST00000582100 CTGFP29279 349 aa18.73■□□□□ 0.59
CCDC57-215ENST00000582100 RRP1BQ14684 758 aaKnown RBP18.73■□□□□ 0.59
CCDC57-215ENST00000582100 CCDC84Q86UT8 332 aaPredicted RBP18.73■□□□□ 0.59
CCDC57-215ENST00000582100 FOXP4Q8IVH2 680 aaPredicted RBP18.73■□□□□ 0.59
CCDC57-215ENST00000582100 MAPKAPK5Q8IW41 473 aa18.73■□□□□ 0.59
CCDC57-215ENST00000582100 SIRT2Q8IXJ6 389 aa18.73■□□□□ 0.59
CCDC57-215ENST00000582100 CLASRPQ8N2M8 674 aaKnown RBP18.73■□□□□ 0.59
CCDC57-215ENST00000582100 KIF1BPQ96EK5 621 aa18.73■□□□□ 0.59
CCDC57-215ENST00000582100 TRIM47Q96LD4 638 aa18.73■□□□□ 0.59
CCDC57-215ENST00000582100 IL1RAPL2Q9NP60 686 aa18.73■□□□□ 0.59
CCDC57-215ENST00000582100 SRRDQ9UH36 339 aa18.73■□□□□ 0.59
CCDC57-215ENST00000582100 RBBP6Q7Z6E9 1792 aaKnown RBP18.73■□□□□ 0.59
CCDC57-215ENST00000582100 BRCA2P51587 3418 aa18.72■□□□□ 0.59
CCDC57-215ENST00000582100 PDE4DIPQ5VU43 2346 aa18.72■□□□□ 0.59
CCDC57-215ENST00000582100 DYNLL1P63167 89 aaKnown RBP18.72■□□□□ 0.59
CCDC57-215ENST00000582100 MAP3K12Q12852 859 aa18.72■□□□□ 0.59
CCDC57-215ENST00000582100 MAGEB6Q8N7X4 407 aa18.72■□□□□ 0.59
CCDC57-215ENST00000582100 ZNF280CQ8ND82 737 aa18.72■□□□□ 0.59
CCDC57-215ENST00000582100 ANTXR1Q9H6X2 564 aa18.72■□□□□ 0.59
CCDC57-215ENST00000582100 AGTPBP1Q9UPW5 1226 aa18.72■□□□□ 0.59
CCDC57-215ENST00000582100 FOCADQ5VW36 1801 aa18.72■□□□□ 0.59
CCDC57-215ENST00000582100 CDK5RAP2Q96SN8 1893 aa18.71■□□□□ 0.59
CCDC57-215ENST00000582100 MKI67P46013 3256 aaKnown RBP18.71■□□□□ 0.59
CCDC57-215ENST00000582100 USP17L5A8MUK1 530 aa18.71■□□□□ 0.59
CCDC57-215ENST00000582100 RAB11FIP3O75154 756 aa18.71■□□□□ 0.59
CCDC57-215ENST00000582100 FMNL1O95466 1100 aaPredicted RBP18.71■□□□□ 0.59
CCDC57-215ENST00000582100 SPP2Q13103 211 aa18.71■□□□□ 0.59
CCDC57-215ENST00000582100 PROCA1Q8NCQ7 364 aaPredicted RBP18.71■□□□□ 0.59
CCDC57-215ENST00000582100 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.71■□□□□ 0.59
CCDC57-215ENST00000582100 TMEM106CQ9BVX2 250 aa18.71■□□□□ 0.59
CCDC57-215ENST00000582100 PALD1Q9ULE6 856 aa18.71■□□□□ 0.59
CCDC57-215ENST00000582100 NDUFB9Q9Y6M9 179 aa18.71■□□□□ 0.59
CCDC57-215ENST00000582100 SIPA1L1O43166 1804 aa18.7■□□□□ 0.58
CCDC57-215ENST00000582100 ATAD5Q96QE3 1844 aa18.7■□□□□ 0.58
CCDC57-215ENST00000582100 OSBPP22059 807 aa18.7■□□□□ 0.58
CCDC57-215ENST00000582100 PDE3AQ14432 1141 aa18.7■□□□□ 0.58
CCDC57-215ENST00000582100 AS3MTQ9HBK9 375 aa18.7■□□□□ 0.58
CCDC57-215ENST00000582100 GINM1Q9NU53 330 aa18.7■□□□□ 0.58
CCDC57-215ENST00000582100 KIAA0100Q14667 2235 aaKnown RBP18.7■□□□□ 0.58
CCDC57-215ENST00000582100 ECM2O94769 699 aaPredicted RBP18.69■□□□□ 0.58
CCDC57-215ENST00000582100 HLA-DOAP06340 250 aa18.69■□□□□ 0.58
CCDC57-215ENST00000582100 ASNSP08243 561 aa18.69■□□□□ 0.58
CCDC57-215ENST00000582100 FCGRTP55899 365 aa18.69■□□□□ 0.58
CCDC57-215ENST00000582100 TTF1Q15361 905 aaPredicted RBP18.69■□□□□ 0.58
CCDC57-215ENST00000582100 SH3D19Q5HYK7 790 aa18.69■□□□□ 0.58
CCDC57-215ENST00000582100 CRACR2BQ8N4Y2 399 aaPredicted RBP18.69■□□□□ 0.58
CCDC57-215ENST00000582100 MIGA1Q8NAN2 632 aa18.69■□□□□ 0.58
CCDC57-215ENST00000582100 SMCR8Q8TEV9 937 aaPredicted RBP18.69■□□□□ 0.58
CCDC57-215ENST00000582100 SH3TC2Q8TF17 1288 aa18.69■□□□□ 0.58
CCDC57-215ENST00000582100 WDR18Q9BV38 432 aa18.69■□□□□ 0.58
CCDC57-215ENST00000582100 TRIM34Q9BYJ4 488 aa18.69■□□□□ 0.58
CCDC57-215ENST00000582100 DNAJC18Q9H819 358 aa18.69■□□□□ 0.58
CCDC57-215ENST00000582100 PNMA3Q9UL41 463 aa18.69■□□□□ 0.58
CCDC57-215ENST00000582100 APBB1O00213 710 aa18.68■□□□□ 0.58
CCDC57-215ENST00000582100 IFIT2P09913 472 aaKnown RBP18.68■□□□□ 0.58
CCDC57-215ENST00000582100 EN2P19622 333 aaPredicted RBP18.68■□□□□ 0.58
CCDC57-215ENST00000582100 TREML2Q5T2D2 321 aa18.68■□□□□ 0.58
CCDC57-215ENST00000582100 PRPF38BQ5VTL8 546 aaKnown RBP18.68■□□□□ 0.58
CCDC57-215ENST00000582100 SAP30BPQ9UHR5 308 aaKnown RBP18.68■□□□□ 0.58
CCDC57-215ENST00000582100 MYPNQ86TC9 1320 aa18.68■□□□□ 0.58
CCDC57-215ENST00000582100 USP5P45974 858 aa18.67■□□□□ 0.58
CCDC57-215ENST00000582100 HMGCS2P54868 508 aa18.67■□□□□ 0.58
CCDC57-215ENST00000582100 PABPC4Q13310 644 aaKnown RBP eCLIP18.67■□□□□ 0.58
CCDC57-215ENST00000582100 SLC4A8Q2Y0W8 1093 aa18.67■□□□□ 0.58
CCDC57-215ENST00000582100 RAET1EQ8TD07 263 aa18.67■□□□□ 0.58
CCDC57-215ENST00000582100 LOC285556D6RIA3 1793 aa18.66■□□□□ 0.58
CCDC57-215ENST00000582100 BACE1P56817 501 aa18.66■□□□□ 0.58
CCDC57-215ENST00000582100 JAG1P78504 1218 aa18.66■□□□□ 0.58
CCDC57-215ENST00000582100 C20orf194Q5TEA3 1177 aa18.66■□□□□ 0.58
CCDC57-215ENST00000582100 RIOK1Q9BRS2 568 aaKnown RBP18.66■□□□□ 0.58
CCDC57-215ENST00000582100 MGAMO43451 1857 aa18.66■□□□□ 0.58
CCDC57-215ENST00000582100 GRK4P32298 578 aa18.65■□□□□ 0.58
CCDC57-215ENST00000582100 GCLCP48506 637 aaPredicted RBP18.65■□□□□ 0.58
CCDC57-215ENST00000582100 PRKCZQ05513 592 aa18.65■□□□□ 0.58
CCDC57-215ENST00000582100 FAM110CQ1W6H9 321 aa18.65■□□□□ 0.58
CCDC57-215ENST00000582100 EHD4Q9H223 541 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms