RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 GABPAQ06546 454 aa18.05■□□□□ 0.48
MKS1-210ENST00000581180 SLC4A8Q2Y0W8 1093 aa18.05■□□□□ 0.48
MKS1-210ENST00000581180 DCAF15Q66K64 600 aa18.05■□□□□ 0.48
MKS1-210ENST00000581180 MOB2Q70IA6 237 aa18.05■□□□□ 0.48
MKS1-210ENST00000581180 FOXP4Q8IVH2 680 aaPredicted RBP18.05■□□□□ 0.48
MKS1-210ENST00000581180 DSCC1Q9BVC3 393 aa18.05■□□□□ 0.48
MKS1-210ENST00000581180 DNAJC18Q9H819 358 aa18.05■□□□□ 0.48
MKS1-210ENST00000581180 ARPP21Q9UBL0 812 aaPredicted RBP18.05■□□□□ 0.48
MKS1-210ENST00000581180 DOCK1Q14185 1865 aa18.04■□□□□ 0.48
MKS1-210ENST00000581180 PPP1R12BO60237 982 aaPredicted RBP18.04■□□□□ 0.48
MKS1-210ENST00000581180 FGAP02671 866 aa18.04■□□□□ 0.48
MKS1-210ENST00000581180 TDO2P48775 406 aa18.04■□□□□ 0.48
MKS1-210ENST00000581180 PRKG1Q13976 671 aa18.04■□□□□ 0.48
MKS1-210ENST00000581180 C2orf69Q8N8R5 385 aa18.04■□□□□ 0.48
MKS1-210ENST00000581180 KLRG1Q96E93 195 aa18.04■□□□□ 0.48
MKS1-210ENST00000581180 ZNF341Q9BYN7 854 aa18.04■□□□□ 0.48
MKS1-210ENST00000581180 NAPBQ9H115 298 aa18.04■□□□□ 0.48
MKS1-210ENST00000581180 HERC5Q9UII4 1024 aaKnown RBP18.04■□□□□ 0.48
MKS1-210ENST00000581180 ZNF112Q9UJU3 913 aa18.04■□□□□ 0.48
MKS1-210ENST00000581180 FAM196BA6NMK8 535 aa18.03■□□□□ 0.48
MKS1-210ENST00000581180 PHF20L1A8MW92 1017 aa18.03■□□□□ 0.48
MKS1-210ENST00000581180 PTH1RQ03431 593 aa18.03■□□□□ 0.48
MKS1-210ENST00000581180 LDLRAD1Q5T700 205 aa18.03■□□□□ 0.48
MKS1-210ENST00000581180 CASC1Q6TDU7 716 aa18.03■□□□□ 0.48
MKS1-210ENST00000581180 ARMC9Q7Z3E5 817 aa18.03■□□□□ 0.48
MKS1-210ENST00000581180 SERPINB13Q9UIV8 391 aa18.03■□□□□ 0.48
MKS1-210ENST00000581180 ANGEL1Q9UNK9 670 aaKnown RBP18.03■□□□□ 0.48
MKS1-210ENST00000581180 ROBO3Q96MS0 1386 aa18.03■□□□□ 0.48
MKS1-210ENST00000581180 SAPCD2Q86UD0 394 aa18.02■□□□□ 0.48
MKS1-210ENST00000581180 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.02■□□□□ 0.48
MKS1-210ENST00000581180 LSG1Q9H089 658 aaKnown RBP18.02■□□□□ 0.48
MKS1-210ENST00000581180 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.02■□□□□ 0.48
MKS1-210ENST00000581180 CREBZFQ9NS37 354 aa18.02■□□□□ 0.48
MKS1-210ENST00000581180 TAOK2Q9UL54 1235 aa18.02■□□□□ 0.48
MKS1-210ENST00000581180 TLL2Q9Y6L7 1015 aa18.02■□□□□ 0.48
MKS1-210ENST00000581180 PHIPQ8WWQ0 1821 aa18.02■□□□□ 0.47
MKS1-210ENST00000581180 MINDY4BA8MYZ0 360 aa18.01■□□□□ 0.47
MKS1-210ENST00000581180 UBE2Q2LH0YL09 131 aa18.01■□□□□ 0.47
MKS1-210ENST00000581180 IREB2P48200 963 aaKnown RBP18.01■□□□□ 0.47
MKS1-210ENST00000581180 TTLL12Q14166 644 aaPredicted RBP18.01■□□□□ 0.47
MKS1-210ENST00000581180 AMOTL1Q8IY63 956 aa18.01■□□□□ 0.47
MKS1-210ENST00000581180 MAP4K1Q92918 833 aa18.01■□□□□ 0.47
MKS1-210ENST00000581180 DYNLL2Q96FJ2 89 aa18.01■□□□□ 0.47
MKS1-210ENST00000581180 UNCXA6NJT0 531 aa18■□□□□ 0.47
MKS1-210ENST00000581180 HSPA6P17066 643 aa18■□□□□ 0.47
MKS1-210ENST00000581180 INPP5BP32019 993 aa18■□□□□ 0.47
MKS1-210ENST00000581180 SHMT1P34896 483 aa18■□□□□ 0.47
MKS1-210ENST00000581180 MAP3K9P80192 1104 aa18■□□□□ 0.47
MKS1-210ENST00000581180 PPARAQ07869 468 aa18■□□□□ 0.47
MKS1-210ENST00000581180 RRP1BQ14684 758 aaKnown RBP18■□□□□ 0.47
MKS1-210ENST00000581180 TATDN1Q6P1N9 297 aa18■□□□□ 0.47
MKS1-210ENST00000581180 PPP1R3FQ6ZSY5 799 aaPredicted RBP18■□□□□ 0.47
MKS1-210ENST00000581180 C16orf86Q6ZW13 317 aa18■□□□□ 0.47
MKS1-210ENST00000581180 CRACR2BQ8N4Y2 399 aaPredicted RBP18■□□□□ 0.47
MKS1-210ENST00000581180 WRNIP1Q96S55 665 aa18■□□□□ 0.47
MKS1-210ENST00000581180 ANAPC4Q9UJX5 808 aa18■□□□□ 0.47
MKS1-210ENST00000581180 GREB1LQ9C091 1923 aaPredicted RBP18■□□□□ 0.47
MKS1-210ENST00000581180 HUNKP57058 714 aa17.99■□□□□ 0.47
MKS1-210ENST00000581180 ANKRD13AQ8IZ07 590 aa17.99■□□□□ 0.47
MKS1-210ENST00000581180 SLC44A5Q8NCS7 719 aa17.99■□□□□ 0.47
MKS1-210ENST00000581180 SWAP70Q9UH65 585 aa17.99■□□□□ 0.47
MKS1-210ENST00000581180 TACC3Q9Y6A5 838 aa17.99■□□□□ 0.47
MKS1-210ENST00000581180 CDK8P49336 464 aa17.98■□□□□ 0.47
MKS1-210ENST00000581180 NOL9Q5SY16 702 aaKnown RBP17.98■□□□□ 0.47
MKS1-210ENST00000581180 KIAA1211Q6ZU35 1233 aa17.98■□□□□ 0.47
MKS1-210ENST00000581180 HHIPL1Q96JK4 782 aa17.98■□□□□ 0.47
MKS1-210ENST00000581180 CLMNQ96JQ2 1002 aa17.98■□□□□ 0.47
MKS1-210ENST00000581180 TRIM34Q9BYJ4 488 aa17.98■□□□□ 0.47
MKS1-210ENST00000581180 NBPF3Q9H094 633 aa17.98■□□□□ 0.47
MKS1-210ENST00000581180 CTNNA3Q9UI47 895 aa17.98■□□□□ 0.47
MKS1-210ENST00000581180 ABT1Q9ULW3 272 aaKnown RBP17.98■□□□□ 0.47
MKS1-210ENST00000581180 PTPRFP10586 1907 aa17.98■□□□□ 0.47
MKS1-210ENST00000581180 CTNND1O60716 968 aaKnown RBP17.97■□□□□ 0.47
MKS1-210ENST00000581180 CAP2P40123 477 aa17.97■□□□□ 0.47
MKS1-210ENST00000581180 CTDSPL2Q05D32 466 aa17.97■□□□□ 0.47
MKS1-210ENST00000581180 VGLL4Q14135 290 aa17.97■□□□□ 0.47
MKS1-210ENST00000581180 ZKSCAN4Q969J2 545 aaPredicted RBP17.97■□□□□ 0.47
MKS1-210ENST00000581180 ANO2Q9NQ90 1003 aa17.97■□□□□ 0.47
MKS1-210ENST00000581180 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.97■□□□□ 0.47
MKS1-210ENST00000581180 SNCAIPQ9Y6H5 919 aa17.97■□□□□ 0.47
MKS1-210ENST00000581180 U3KPZ7 1027 aaPredicted RBP17.97■□□□□ 0.47
MKS1-210ENST00000581180 RASSF10A6NK89 507 aa17.96■□□□□ 0.47
MKS1-210ENST00000581180 FGRP09769 529 aa17.96■□□□□ 0.47
MKS1-210ENST00000581180 HAND2P61296 217 aa17.96■□□□□ 0.47
MKS1-210ENST00000581180 JAG1P78504 1218 aa17.96■□□□□ 0.47
MKS1-210ENST00000581180 HTRA3P83110 453 aa17.96■□□□□ 0.47
MKS1-210ENST00000581180 RBM8AQ9Y5S9 174 aaKnown RBP17.96■□□□□ 0.47
MKS1-210ENST00000581180 ZNF213O14771 459 aa17.95■□□□□ 0.46
MKS1-210ENST00000581180 SHROOM1Q2M3G4 852 aaPredicted RBP17.95■□□□□ 0.46
MKS1-210ENST00000581180 C8orf34Q49A92 452 aa17.95■□□□□ 0.46
MKS1-210ENST00000581180 CERKLQ49MI3 558 aaPredicted RBP17.95■□□□□ 0.46
MKS1-210ENST00000581180 RGMBQ6NW40 437 aa17.95■□□□□ 0.46
MKS1-210ENST00000581180 SCYL3Q8IZE3 742 aa17.95■□□□□ 0.46
MKS1-210ENST00000581180 STK11IPQ8N1F8 1099 aa17.95■□□□□ 0.46
MKS1-210ENST00000581180 CSADQ9Y600 493 aa17.95■□□□□ 0.46
MKS1-210ENST00000581180 GDF11O95390 407 aa17.94■□□□□ 0.46
MKS1-210ENST00000581180 SLC3A2P08195 630 aaKnown RBP17.94■□□□□ 0.46
MKS1-210ENST00000581180 CYP21A2P08686 494 aa17.94■□□□□ 0.46
MKS1-210ENST00000581180 RASA1P20936 1047 aa17.94■□□□□ 0.46
MKS1-210ENST00000581180 NECTIN1Q15223 517 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms