RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 NAPBQ9H115 298 aa18.52■□□□□ 0.56
SS18-216ENST00000580751 EPB41L4AQ9HCS5 686 aaPredicted RBP18.52■□□□□ 0.56
SS18-216ENST00000580751 SERPINB13Q9UIV8 391 aa18.52■□□□□ 0.56
SS18-216ENST00000580751 BAZ2AQ9UIF9 1905 aaKnown RBP18.52■□□□□ 0.56
SS18-216ENST00000580751 SIPA1L1O43166 1804 aa18.51■□□□□ 0.55
SS18-216ENST00000580751 USP17L12C9JPN9 530 aa18.51■□□□□ 0.55
SS18-216ENST00000580751 USP17L21D6R901 530 aa18.51■□□□□ 0.55
SS18-216ENST00000580751 SLC4A8Q2Y0W8 1093 aa18.51■□□□□ 0.55
SS18-216ENST00000580751 SBK1Q52WX2 424 aa18.51■□□□□ 0.55
SS18-216ENST00000580751 MOB2Q70IA6 237 aa18.51■□□□□ 0.55
SS18-216ENST00000580751 METTL16Q86W50 562 aaKnown RBP18.51■□□□□ 0.55
SS18-216ENST00000580751 ANKRD13AQ8IZ07 590 aa18.51■□□□□ 0.55
SS18-216ENST00000580751 IFNL3Q8IZI9 196 aa18.51■□□□□ 0.55
SS18-216ENST00000580751 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.51■□□□□ 0.55
SS18-216ENST00000580751 KLRG1Q96E93 195 aa18.51■□□□□ 0.55
SS18-216ENST00000580751 WRNIP1Q96S55 665 aa18.51■□□□□ 0.55
SS18-216ENST00000580751 UPF2Q9HAU5 1272 aaKnown RBP18.51■□□□□ 0.55
SS18-216ENST00000580751 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.51■□□□□ 0.55
SS18-216ENST00000580751 FZD1Q9UP38 647 aa18.51■□□□□ 0.55
SS18-216ENST00000580751 ZMYM6O95789 1325 aa18.5■□□□□ 0.55
SS18-216ENST00000580751 UBE2Q2LH0YL09 131 aa18.5■□□□□ 0.55
SS18-216ENST00000580751 LDLRAD1Q5T700 205 aa18.5■□□□□ 0.55
SS18-216ENST00000580751 C12orf60Q5U649 245 aa18.5■□□□□ 0.55
SS18-216ENST00000580751 VPS53Q5VIR6 699 aa18.5■□□□□ 0.55
SS18-216ENST00000580751 CTR9Q6PD62 1173 aa18.5■□□□□ 0.55
SS18-216ENST00000580751 LAMB1P07942 1786 aa18.5■□□□□ 0.55
SS18-216ENST00000580751 OTOFQ9HC10 1997 aa18.5■□□□□ 0.55
SS18-216ENST00000580751 RASSF10A6NK89 507 aa18.49■□□□□ 0.55
SS18-216ENST00000580751 FOXP2O15409 715 aa18.49■□□□□ 0.55
SS18-216ENST00000580751 SGSM2O43147 1006 aa18.49■□□□□ 0.55
SS18-216ENST00000580751 HSPD1P10809 573 aaKnown RBP18.49■□□□□ 0.55
SS18-216ENST00000580751 PLCD1P51178 756 aa18.49■□□□□ 0.55
SS18-216ENST00000580751 MAP3K9P80192 1104 aa18.49■□□□□ 0.55
SS18-216ENST00000580751 ALX1Q15699 326 aa18.49■□□□□ 0.55
SS18-216ENST00000580751 ZNF112Q9UJU3 913 aa18.49■□□□□ 0.55
SS18-216ENST00000580751 CSADQ9Y600 493 aa18.49■□□□□ 0.55
SS18-216ENST00000580751 ROBO3Q96MS0 1386 aa18.48■□□□□ 0.55
SS18-216ENST00000580751 REC8O95072 547 aa18.48■□□□□ 0.55
SS18-216ENST00000580751 CYP2D6P10635 497 aa18.48■□□□□ 0.55
SS18-216ENST00000580751 ESYT1Q9BSJ8 1104 aa18.48■□□□□ 0.55
SS18-216ENST00000580751 DSCC1Q9BVC3 393 aa18.48■□□□□ 0.55
SS18-216ENST00000580751 IL25Q9H293 177 aa18.48■□□□□ 0.55
SS18-216ENST00000580751 SWAP70Q9UH65 585 aa18.48■□□□□ 0.55
SS18-216ENST00000580751 FAM196BA6NMK8 535 aa18.47■□□□□ 0.55
SS18-216ENST00000580751 PHF20L1A8MW92 1017 aa18.47■□□□□ 0.55
SS18-216ENST00000580751 MINDY4BA8MYZ0 360 aa18.47■□□□□ 0.55
SS18-216ENST00000580751 GABPAQ06546 454 aa18.47■□□□□ 0.55
SS18-216ENST00000580751 VGLL4Q14135 290 aa18.47■□□□□ 0.55
SS18-216ENST00000580751 DEFB115Q30KQ5 88 aa18.47■□□□□ 0.55
SS18-216ENST00000580751 RGMBQ6NW40 437 aa18.47■□□□□ 0.55
SS18-216ENST00000580751 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.47■□□□□ 0.55
SS18-216ENST00000580751 DNAJC18Q9H819 358 aa18.47■□□□□ 0.55
SS18-216ENST00000580751 CYP2D7A0A087X1C5 515 aa18.46■□□□□ 0.55
SS18-216ENST00000580751 CTNND1O60716 968 aaKnown RBP18.46■□□□□ 0.55
SS18-216ENST00000580751 SLC3A2P08195 630 aaKnown RBP18.46■□□□□ 0.55
SS18-216ENST00000580751 SLURP2P0DP57 97 aa18.46■□□□□ 0.55
SS18-216ENST00000580751 INPP5BP32019 993 aa18.46■□□□□ 0.55
SS18-216ENST00000580751 ZNF157P51786 506 aaPredicted RBP18.46■□□□□ 0.55
SS18-216ENST00000580751 HTRA3P83110 453 aa18.46■□□□□ 0.55
SS18-216ENST00000580751 NOL9Q5SY16 702 aaKnown RBP18.46■□□□□ 0.55
SS18-216ENST00000580751 KIAA1211Q6ZU35 1233 aa18.46■□□□□ 0.55
SS18-216ENST00000580751 PAXIP1Q6ZW49 1069 aaPredicted RBP18.46■□□□□ 0.55
SS18-216ENST00000580751 FGAP02671 866 aa18.45■□□□□ 0.54
SS18-216ENST00000580751 ECE1P42892 770 aa18.45■□□□□ 0.54
SS18-216ENST00000580751 PPARAQ07869 468 aa18.45■□□□□ 0.54
SS18-216ENST00000580751 TATDN1Q6P1N9 297 aa18.45■□□□□ 0.54
SS18-216ENST00000580751 C16orf86Q6ZW13 317 aa18.45■□□□□ 0.54
SS18-216ENST00000580751 SCYL3Q8IZE3 742 aa18.45■□□□□ 0.54
SS18-216ENST00000580751 ZKSCAN4Q969J2 545 aaPredicted RBP18.45■□□□□ 0.54
SS18-216ENST00000580751 CCDC102AQ96A19 550 aa18.45■□□□□ 0.54
SS18-216ENST00000580751 SLC10A4Q96EP9 437 aa18.45■□□□□ 0.54
SS18-216ENST00000580751 CLMNQ96JQ2 1002 aa18.45■□□□□ 0.54
SS18-216ENST00000580751 ZNF287Q9HBT7 754 aa18.45■□□□□ 0.54
SS18-216ENST00000580751 CTNNA3Q9UI47 895 aa18.45■□□□□ 0.54
SS18-216ENST00000580751 DOCK1Q14185 1865 aa18.44■□□□□ 0.54
SS18-216ENST00000580751 SHMT1P34896 483 aa18.44■□□□□ 0.54
SS18-216ENST00000580751 CAP2P40123 477 aa18.44■□□□□ 0.54
SS18-216ENST00000580751 EVX2Q03828 476 aa18.44■□□□□ 0.54
SS18-216ENST00000580751 DYNLL2Q96FJ2 89 aa18.44■□□□□ 0.54
SS18-216ENST00000580751 PICK1Q9NRD5 415 aa18.44■□□□□ 0.54
SS18-216ENST00000580751 GINM1Q9NU53 330 aa18.44■□□□□ 0.54
SS18-216ENST00000580751 SNCAIPQ9Y6H5 919 aa18.44■□□□□ 0.54
SS18-216ENST00000580751 CEP350Q5VT06 3117 aa18.44■□□□□ 0.54
SS18-216ENST00000580751 SLC10A3P09131 477 aa18.43■□□□□ 0.54
SS18-216ENST00000580751 RASAL3Q86YV0 1011 aa18.43■□□□□ 0.54
SS18-216ENST00000580751 CAPNS2Q96L46 248 aa18.43■□□□□ 0.54
SS18-216ENST00000580751 ELP3Q9H9T3 547 aa18.43■□□□□ 0.54
SS18-216ENST00000580751 ANAPC4Q9UJX5 808 aa18.43■□□□□ 0.54
SS18-216ENST00000580751 MYH8P13535 1937 aa18.43■□□□□ 0.54
SS18-216ENST00000580751 LAMA4Q16363 1823 aa18.42■□□□□ 0.54
SS18-216ENST00000580751 SPDYE5A6NIY4 337 aa18.42■□□□□ 0.54
SS18-216ENST00000580751 ASNSP08243 561 aa18.42■□□□□ 0.54
SS18-216ENST00000580751 CDK8P49336 464 aa18.42■□□□□ 0.54
SS18-216ENST00000580751 PDE4BQ07343 736 aa18.42■□□□□ 0.54
SS18-216ENST00000580751 CERKLQ49MI3 558 aaPredicted RBP18.42■□□□□ 0.54
SS18-216ENST00000580751 CYP4F22Q6NT55 531 aa18.42■□□□□ 0.54
SS18-216ENST00000580751 ERO1BQ86YB8 467 aa18.42■□□□□ 0.54
SS18-216ENST00000580751 SLC44A5Q8NCS7 719 aa18.42■□□□□ 0.54
SS18-216ENST00000580751 ANO2Q9NQ90 1003 aa18.42■□□□□ 0.54
SS18-216ENST00000580751 U3KPZ7 1027 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms