RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 GPR25O00155 361 aa13.18□□□□□ -0.3
NDEL1-208ENST00000580237 TSHZ3Q63HK5 1081 aa13.18□□□□□ -0.3
NDEL1-208ENST00000580237 ZSCAN25Q6NSZ9 544 aa13.18□□□□□ -0.3
NDEL1-208ENST00000580237 MS4A4AQ96JQ5 239 aa13.18□□□□□ -0.3
NDEL1-208ENST00000580237 CRNKL1Q9BZJ0 848 aaKnown RBP13.18□□□□□ -0.3
NDEL1-208ENST00000580237 PI4KBQ9UBF8 816 aa13.18□□□□□ -0.3
NDEL1-208ENST00000580237 PALD1Q9ULE6 856 aa13.18□□□□□ -0.3
NDEL1-208ENST00000580237 SUPT16HQ9Y5B9 1047 aaKnown RBP13.18□□□□□ -0.3
NDEL1-208ENST00000580237 ERC2O15083 957 aa13.17□□□□□ -0.3
NDEL1-208ENST00000580237 TBC1D12O60347 775 aa13.17□□□□□ -0.3
NDEL1-208ENST00000580237 CTNND1O60716 968 aaKnown RBP13.17□□□□□ -0.3
NDEL1-208ENST00000580237 SLURP2P0DP57 97 aa13.17□□□□□ -0.3
NDEL1-208ENST00000580237 CRHR2Q13324 411 aa13.17□□□□□ -0.3
NDEL1-208ENST00000580237 ZNF296Q8WUU4 475 aaPredicted RBP13.17□□□□□ -0.3
NDEL1-208ENST00000580237 GCC1Q96CN9 775 aa13.17□□□□□ -0.3
NDEL1-208ENST00000580237 LOC285556D6RIA3 1793 aa13.17□□□□□ -0.3
NDEL1-208ENST00000580237 TESPA1A2RU30 521 aaPredicted RBP13.16□□□□□ -0.3
NDEL1-208ENST00000580237 PHF20L1A8MW92 1017 aa13.16□□□□□ -0.3
NDEL1-208ENST00000580237 FKTNO75072 461 aa13.16□□□□□ -0.3
NDEL1-208ENST00000580237 ADD2P35612 726 aa13.16□□□□□ -0.3
NDEL1-208ENST00000580237 HDAC1Q13547 482 aaPredicted RBP13.16□□□□□ -0.3
NDEL1-208ENST00000580237 ANKRD45Q5TZF3 282 aa13.16□□□□□ -0.3
NDEL1-208ENST00000580237 CTU1Q7Z7A3 348 aaKnown RBP13.16□□□□□ -0.3
NDEL1-208ENST00000580237 FAM43AQ8N2R8 423 aa13.16□□□□□ -0.3
NDEL1-208ENST00000580237 DDRGK1Q96HY6 314 aa13.16□□□□□ -0.3
NDEL1-208ENST00000580237 CFHR5Q9BXR6 569 aa13.16□□□□□ -0.3
NDEL1-208ENST00000580237 MCOLN1Q9GZU1 580 aa13.16□□□□□ -0.3
NDEL1-208ENST00000580237 ZFYVE28Q9HCC9 887 aa13.16□□□□□ -0.3
NDEL1-208ENST00000580237 ZHX2Q9Y6X8 837 aa13.16□□□□□ -0.3
NDEL1-208ENST00000580237 TTC41PQ6P2S7 1318 aa13.15□□□□□ -0.3
NDEL1-208ENST00000580237 TRIM75PA6NK02 468 aa13.15□□□□□ -0.3
NDEL1-208ENST00000580237 MBD4O95243 580 aa13.15□□□□□ -0.3
NDEL1-208ENST00000580237 POLR3DP05423 398 aaPredicted RBP13.15□□□□□ -0.3
NDEL1-208ENST00000580237 PTPRAP18433 802 aa13.15□□□□□ -0.3
NDEL1-208ENST00000580237 MX1P20591 662 aa13.15□□□□□ -0.3
NDEL1-208ENST00000580237 NOM1Q5C9Z4 860 aaKnown RBP13.15□□□□□ -0.3
NDEL1-208ENST00000580237 GADL1Q6ZQY3 521 aa13.15□□□□□ -0.3
NDEL1-208ENST00000580237 TTC6Q86TZ1 520 aa13.15□□□□□ -0.3
NDEL1-208ENST00000580237 AMOTL1Q8IY63 956 aa13.15□□□□□ -0.3
NDEL1-208ENST00000580237 LCORLQ8N3X6 602 aa13.15□□□□□ -0.3
NDEL1-208ENST00000580237 EXOC6Q8TAG9 804 aa13.15□□□□□ -0.3
NDEL1-208ENST00000580237 ABHD8Q96I13 439 aa13.15□□□□□ -0.3
NDEL1-208ENST00000580237 PTPN18Q99952 460 aa13.15□□□□□ -0.3
NDEL1-208ENST00000580237 RIOK1Q9BRS2 568 aaKnown RBP13.15□□□□□ -0.3
NDEL1-208ENST00000580237 RWDD1Q9H446 243 aaPredicted RBP13.15□□□□□ -0.3
NDEL1-208ENST00000580237 ARMT1Q9H993 441 aa13.15□□□□□ -0.3
NDEL1-208ENST00000580237 KCNH4Q9UQ05 1017 aa13.15□□□□□ -0.3
NDEL1-208ENST00000580237 TCRBV5S4A2TA0A5A2 114 aa13.14□□□□□ -0.31
NDEL1-208ENST00000580237 BTBD19C9JJ37 291 aa13.14□□□□□ -0.31
NDEL1-208ENST00000580237 GLRX3O76003 335 aaKnown RBP13.14□□□□□ -0.31
NDEL1-208ENST00000580237 CAP2P40123 477 aa13.14□□□□□ -0.31
NDEL1-208ENST00000580237 MAP3K10Q02779 954 aa13.14□□□□□ -0.31
NDEL1-208ENST00000580237 LRRFIP1Q32MZ4 808 aaKnown RBP13.14□□□□□ -0.31
NDEL1-208ENST00000580237 CCDC84Q86UT8 332 aaPredicted RBP13.14□□□□□ -0.31
NDEL1-208ENST00000580237 FOXP4Q8IVH2 680 aaPredicted RBP13.14□□□□□ -0.31
NDEL1-208ENST00000580237 ERO1AQ96HE7 468 aa13.14□□□□□ -0.31
NDEL1-208ENST00000580237 R3HDMLQ9H3Y0 253 aa13.14□□□□□ -0.31
NDEL1-208ENST00000580237 AS3MTQ9HBK9 375 aa13.14□□□□□ -0.31
NDEL1-208ENST00000580237 ZCCHC17Q9NP64 241 aaKnown RBP13.14□□□□□ -0.31
NDEL1-208ENST00000580237 MCM9Q9NXL9 1143 aa13.14□□□□□ -0.31
NDEL1-208ENST00000580237 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.14□□□□□ -0.31
NDEL1-208ENST00000580237 SERPINB13Q9UIV8 391 aa13.14□□□□□ -0.31
NDEL1-208ENST00000580237 ZSWIM8A7E2V4 1837 aa13.13□□□□□ -0.31
NDEL1-208ENST00000580237 MGAMO43451 1857 aa13.13□□□□□ -0.31
NDEL1-208ENST00000580237 PDHXO00330 501 aa13.13□□□□□ -0.31
NDEL1-208ENST00000580237 CXCL11O14625 94 aa13.13□□□□□ -0.31
NDEL1-208ENST00000580237 GDF11O95390 407 aa13.13□□□□□ -0.31
NDEL1-208ENST00000580237 ASNSP08243 561 aa13.13□□□□□ -0.31
NDEL1-208ENST00000580237 UBE3CQ15386 1083 aa13.13□□□□□ -0.31
NDEL1-208ENST00000580237 FASTKD5Q7L8L6 764 aaKnown RBP13.13□□□□□ -0.31
NDEL1-208ENST00000580237 ANKRD23Q86SG2 305 aa13.13□□□□□ -0.31
NDEL1-208ENST00000580237 KBTBD3Q8NAB2 608 aa13.13□□□□□ -0.31
NDEL1-208ENST00000580237 OTUD7AQ8TE49 926 aaPredicted RBP13.13□□□□□ -0.31
NDEL1-208ENST00000580237 SDR42E1Q8WUS8 393 aa13.13□□□□□ -0.31
NDEL1-208ENST00000580237 PARK7Q99497 189 aaKnown RBP13.13□□□□□ -0.31
NDEL1-208ENST00000580237 FSD1Q9BTV5 496 aa13.13□□□□□ -0.31
NDEL1-208ENST00000580237 A0A0G2JLL6 359 aaPredicted RBP13.12□□□□□ -0.31
NDEL1-208ENST00000580237 ZFYP08048 801 aaPredicted RBP13.12□□□□□ -0.31
NDEL1-208ENST00000580237 IRX6P78412 446 aaPredicted RBP13.12□□□□□ -0.31
NDEL1-208ENST00000580237 SP3Q02447 781 aa13.12□□□□□ -0.31
NDEL1-208ENST00000580237 SLFNL1Q499Z3 407 aa13.12□□□□□ -0.31
NDEL1-208ENST00000580237 PRRT2Q7Z6L0 340 aaPredicted RBP13.12□□□□□ -0.31
NDEL1-208ENST00000580237 TBC1D2Q9BYX2 928 aa13.12□□□□□ -0.31
NDEL1-208ENST00000580237 EHD4Q9H223 541 aa13.12□□□□□ -0.31
NDEL1-208ENST00000580237 DNAJC18Q9H819 358 aa13.12□□□□□ -0.31
NDEL1-208ENST00000580237 ZBTB21Q9ULJ3 1066 aa13.12□□□□□ -0.31
NDEL1-208ENST00000580237 CCDC85CA6NKD9 419 aa13.11□□□□□ -0.31
NDEL1-208ENST00000580237 USP17L5A8MUK1 530 aa13.11□□□□□ -0.31
NDEL1-208ENST00000580237 SPP2Q13103 211 aa13.11□□□□□ -0.31
NDEL1-208ENST00000580237 KIF22Q14807 665 aa13.11□□□□□ -0.31
NDEL1-208ENST00000580237 B4GALNT3Q6L9W6 998 aa13.11□□□□□ -0.31
NDEL1-208ENST00000580237 ZNF280CQ8ND82 737 aa13.11□□□□□ -0.31
NDEL1-208ENST00000580237 CD99L2Q8TCZ2 262 aa13.11□□□□□ -0.31
NDEL1-208ENST00000580237 SMCR8Q8TEV9 937 aaPredicted RBP13.11□□□□□ -0.31
NDEL1-208ENST00000580237 APPBP2Q92624 585 aa13.11□□□□□ -0.31
NDEL1-208ENST00000580237 FEZ1Q99689 392 aa13.11□□□□□ -0.31
NDEL1-208ENST00000580237 LNPKQ9C0E8 428 aa13.11□□□□□ -0.31
NDEL1-208ENST00000580237 AFG3L2Q9Y4W6 797 aa13.11□□□□□ -0.31
NDEL1-208ENST00000580237 TRIM17Q9Y577 477 aa13.11□□□□□ -0.31
NDEL1-208ENST00000580237 SLC4A4Q9Y6R1 1079 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms