RNA–Protein interactions for RNA: ENST00000580218.5

DHX40-208, Transcript of DEAH-box helicase 40, humanhuman

TSL 5

Gene DHX40, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-208ENST00000580218 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.23■□□□□ 0.19
DHX40-208ENST00000580218 ELP3Q9H9T3 547 aa16.23■□□□□ 0.19
DHX40-208ENST00000580218 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.23■□□□□ 0.19
DHX40-208ENST00000580218 PALD1Q9ULE6 856 aa16.23■□□□□ 0.19
DHX40-208ENST00000580218 RNF113AO15541 343 aaKnown RBP16.22■□□□□ 0.19
DHX40-208ENST00000580218 GSPT1P15170 499 aaKnown RBP16.22■□□□□ 0.19
DHX40-208ENST00000580218 SHROOM1Q2M3G4 852 aaPredicted RBP16.22■□□□□ 0.19
DHX40-208ENST00000580218 DCAF15Q66K64 600 aa16.22■□□□□ 0.19
DHX40-208ENST00000580218 APPBP2Q92624 585 aa16.22■□□□□ 0.19
DHX40-208ENST00000580218 SEC62Q99442 399 aaKnown RBP16.22■□□□□ 0.19
DHX40-208ENST00000580218 NOL10Q9BSC4 688 aaKnown RBP16.22■□□□□ 0.19
DHX40-208ENST00000580218 EPB41L4AQ9HCS5 686 aaPredicted RBP16.22■□□□□ 0.19
DHX40-208ENST00000580218 DCP1AQ9NPI6 582 aaPredicted RBP16.22■□□□□ 0.19
DHX40-208ENST00000580218 SAP30BPQ9UHR5 308 aaKnown RBP16.22■□□□□ 0.19
DHX40-208ENST00000580218 LAMA4Q16363 1823 aa16.22■□□□□ 0.19
DHX40-208ENST00000580218 FOXN1O15353 648 aa16.21■□□□□ 0.19
DHX40-208ENST00000580218 ZBTB48P10074 688 aaPredicted RBP16.21■□□□□ 0.19
DHX40-208ENST00000580218 GABPAQ06546 454 aa16.21■□□□□ 0.19
DHX40-208ENST00000580218 MKRN3Q13064 507 aaKnown RBP16.21■□□□□ 0.19
DHX40-208ENST00000580218 ZMYM1Q5SVZ6 1142 aa16.21■□□□□ 0.19
DHX40-208ENST00000580218 SKAP1Q86WV1 359 aa16.21■□□□□ 0.19
DHX40-208ENST00000580218 OPTNQ96CV9 577 aa16.21■□□□□ 0.19
DHX40-208ENST00000580218 HOOK2Q96ED9 719 aa16.21■□□□□ 0.19
DHX40-208ENST00000580218 MS4A4AQ96JQ5 239 aa16.21■□□□□ 0.19
DHX40-208ENST00000580218 STRBPQ96SI9 672 aaKnown RBP16.21■□□□□ 0.19
DHX40-208ENST00000580218 HTTP42858 3142 aa16.2■□□□□ 0.18
DHX40-208ENST00000580218 PLCD1P51178 756 aa16.2■□□□□ 0.18
DHX40-208ENST00000580218 SLC4A8Q2Y0W8 1093 aa16.2■□□□□ 0.18
DHX40-208ENST00000580218 ZSCAN29Q8IWY8 852 aaPredicted RBP16.2■□□□□ 0.18
DHX40-208ENST00000580218 FSD1Q9BTV5 496 aa16.2■□□□□ 0.18
DHX40-208ENST00000580218 EHD4Q9H223 541 aa16.2■□□□□ 0.18
DHX40-208ENST00000580218 DHX36Q9H2U1 1008 aaKnown RBP16.2■□□□□ 0.18
DHX40-208ENST00000580218 A0A0D9SFI3 127 aa16.19■□□□□ 0.18
DHX40-208ENST00000580218 TESPA1A2RU30 521 aaPredicted RBP16.19■□□□□ 0.18
DHX40-208ENST00000580218 GSG1L2A8MUP6 293 aa16.19■□□□□ 0.18
DHX40-208ENST00000580218 GPAA1O43292 621 aa16.19■□□□□ 0.18
DHX40-208ENST00000580218 ZFYP08048 801 aaPredicted RBP16.19■□□□□ 0.18
DHX40-208ENST00000580218 CYP2D6P10635 497 aa16.19■□□□□ 0.18
DHX40-208ENST00000580218 MOGSQ13724 837 aa16.19■□□□□ 0.18
DHX40-208ENST00000580218 ZSCAN25Q6NSZ9 544 aa16.19■□□□□ 0.18
DHX40-208ENST00000580218 EVI5LQ96CN4 794 aa16.19■□□□□ 0.18
DHX40-208ENST00000580218 CRNKL1Q9BZJ0 848 aaKnown RBP16.19■□□□□ 0.18
DHX40-208ENST00000580218 PI4KBQ9UBF8 816 aa16.19■□□□□ 0.18
DHX40-208ENST00000580218 HERC5Q9UII4 1024 aaKnown RBP16.19■□□□□ 0.18
DHX40-208ENST00000580218 ROBO3Q96MS0 1386 aa16.18■□□□□ 0.18
DHX40-208ENST00000580218 IGF2BP3O00425 579 aaKnown RBP eCLIP16.18■□□□□ 0.18
DHX40-208ENST00000580218 TM4SF4P48230 202 aa16.18■□□□□ 0.18
DHX40-208ENST00000580218 CCDC84Q86UT8 332 aaPredicted RBP16.18■□□□□ 0.18
DHX40-208ENST00000580218 ERO1BQ86YB8 467 aa16.18■□□□□ 0.18
DHX40-208ENST00000580218 SCYL3Q8IZE3 742 aa16.18■□□□□ 0.18
DHX40-208ENST00000580218 SLC10A4Q96EP9 437 aa16.18■□□□□ 0.18
DHX40-208ENST00000580218 OTUD5Q96G74 571 aa16.18■□□□□ 0.18
DHX40-208ENST00000580218 PTPN18Q99952 460 aa16.18■□□□□ 0.18
DHX40-208ENST00000580218 CYP2D7A0A087X1C5 515 aa16.17■□□□□ 0.18
DHX40-208ENST00000580218 IRF6O14896 467 aa16.17■□□□□ 0.18
DHX40-208ENST00000580218 HSPA8P11142 646 aaKnown RBP16.17■□□□□ 0.18
DHX40-208ENST00000580218 SHMT1P34896 483 aa16.17■□□□□ 0.18
DHX40-208ENST00000580218 USP5P45974 858 aa16.17■□□□□ 0.18
DHX40-208ENST00000580218 MAP2K1Q02750 393 aaPredicted RBP16.17■□□□□ 0.18
DHX40-208ENST00000580218 PPIL2Q13356 520 aa16.17■□□□□ 0.18
DHX40-208ENST00000580218 TTC22Q5TAA0 569 aa16.17■□□□□ 0.18
DHX40-208ENST00000580218 TATDN1Q6P1N9 297 aa16.17■□□□□ 0.18
DHX40-208ENST00000580218 CCDC129Q6ZRS4 1044 aa16.17■□□□□ 0.18
DHX40-208ENST00000580218 BRI3BPQ8WY22 251 aa16.17■□□□□ 0.18
DHX40-208ENST00000580218 FAM227BQ96M60 508 aa16.17■□□□□ 0.18
DHX40-208ENST00000580218 IL25Q9H293 177 aa16.17■□□□□ 0.18
DHX40-208ENST00000580218 ZBTB47Q9UFB7 747 aaPredicted RBP16.17■□□□□ 0.18
DHX40-208ENST00000580218 KCNH4Q9UQ05 1017 aa16.17■□□□□ 0.18
DHX40-208ENST00000580218 CSADQ9Y600 493 aa16.17■□□□□ 0.18
DHX40-208ENST00000580218 CTNND1O60716 968 aaKnown RBP16.16■□□□□ 0.18
DHX40-208ENST00000580218 PTPRAP18433 802 aa16.16■□□□□ 0.18
DHX40-208ENST00000580218 CAP2P40123 477 aa16.16■□□□□ 0.18
DHX40-208ENST00000580218 CENPQQ7L2Z9 268 aaPredicted RBP16.16■□□□□ 0.18
DHX40-208ENST00000580218 ZNF589Q86UQ0 364 aaPredicted RBP16.16■□□□□ 0.18
DHX40-208ENST00000580218 AIDAQ96BJ3 306 aa16.16■□□□□ 0.18
DHX40-208ENST00000580218 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.16■□□□□ 0.18
DHX40-208ENST00000580218 ATP8A2Q9NTI2 1148 aa16.16■□□□□ 0.18
DHX40-208ENST00000580218 ZSWIM8A7E2V4 1837 aa16.16■□□□□ 0.18
DHX40-208ENST00000580218 PPATQ06203 517 aa16.15■□□□□ 0.18
DHX40-208ENST00000580218 C12orf60Q5U649 245 aa16.15■□□□□ 0.18
DHX40-208ENST00000580218 VPS53Q5VIR6 699 aa16.15■□□□□ 0.18
DHX40-208ENST00000580218 TICAM2Q86XR7 235 aa16.15■□□□□ 0.18
DHX40-208ENST00000580218 FOXP4Q8IVH2 680 aaPredicted RBP16.15■□□□□ 0.18
DHX40-208ENST00000580218 SLC44A5Q8NCS7 719 aa16.15■□□□□ 0.18
DHX40-208ENST00000580218 RNF186Q9NXI6 227 aa16.15■□□□□ 0.18
DHX40-208ENST00000580218 MCM9Q9NXL9 1143 aa16.15■□□□□ 0.18
DHX40-208ENST00000580218 SERPINB13Q9UIV8 391 aa16.15■□□□□ 0.18
DHX40-208ENST00000580218 TSKSQ9UJT2 592 aa16.15■□□□□ 0.18
DHX40-208ENST00000580218 SLC4A4Q9Y6R1 1079 aa16.15■□□□□ 0.18
DHX40-208ENST00000580218 CASP8AP2Q9UKL3 1982 aa16.15■□□□□ 0.18
DHX40-208ENST00000580218 MANSC4A6NHS7 340 aaPredicted RBP16.14■□□□□ 0.17
DHX40-208ENST00000580218 NMIQ13287 307 aaPredicted RBP16.14■□□□□ 0.17
DHX40-208ENST00000580218 CTR9Q6PD62 1173 aa16.14■□□□□ 0.17
DHX40-208ENST00000580218 DYNLL2Q96FJ2 89 aa16.14■□□□□ 0.17
DHX40-208ENST00000580218 CFHR5Q9BXR6 569 aa16.14■□□□□ 0.17
DHX40-208ENST00000580218 R3HDMLQ9H3Y0 253 aa16.14■□□□□ 0.17
DHX40-208ENST00000580218 SAGE1Q9NXZ1 904 aa16.14■□□□□ 0.17
DHX40-208ENST00000580218 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.14■□□□□ 0.17
DHX40-208ENST00000580218 AFG3L2Q9Y4W6 797 aa16.14■□□□□ 0.17
DHX40-208ENST00000580218 PARP14Q460N5 1801 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms