RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 POLR3DP05423 398 aaPredicted RBP27.22■■□□□ 1.95
NDEL1-207ENST00000580012 HLA-DOAP06340 250 aa27.22■■□□□ 1.95
NDEL1-207ENST00000580012 MAP3K9P80192 1104 aa27.22■■□□□ 1.95
NDEL1-207ENST00000580012 GABPAQ06546 454 aa27.22■■□□□ 1.95
NDEL1-207ENST00000580012 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.22■■□□□ 1.95
NDEL1-207ENST00000580012 DDRGK1Q96HY6 314 aa27.22■■□□□ 1.95
NDEL1-207ENST00000580012 TAOK2Q9UL54 1235 aa27.22■■□□□ 1.95
NDEL1-207ENST00000580012 CYP2D6P10635 497 aa27.21■■□□□ 1.95
NDEL1-207ENST00000580012 HSPD1P10809 573 aaKnown RBP27.21■■□□□ 1.95
NDEL1-207ENST00000580012 MFAP1P55081 439 aaKnown RBP27.21■■□□□ 1.95
NDEL1-207ENST00000580012 RUFY2Q8WXA3 655 aa27.21■■□□□ 1.95
NDEL1-207ENST00000580012 DNAJC18Q9H819 358 aa27.21■■□□□ 1.95
NDEL1-207ENST00000580012 RAD50Q92878 1312 aa27.2■■□□□ 1.95
NDEL1-207ENST00000580012 PAPPA2Q9BXP8 1791 aa27.2■■□□□ 1.95
NDEL1-207ENST00000580012 APPP05067 770 aa27.2■■□□□ 1.94
NDEL1-207ENST00000580012 EVX2Q03828 476 aa27.2■■□□□ 1.94
NDEL1-207ENST00000580012 DEFB115Q30KQ5 88 aa27.2■■□□□ 1.94
NDEL1-207ENST00000580012 ANKRD13AQ8IZ07 590 aa27.2■■□□□ 1.94
NDEL1-207ENST00000580012 TRPM7Q96QT4 1865 aa27.2■■□□□ 1.94
NDEL1-207ENST00000580012 NACAP1Q9BZK3 213 aa27.2■■□□□ 1.94
NDEL1-207ENST00000580012 SERPINB13Q9UIV8 391 aa27.2■■□□□ 1.94
NDEL1-207ENST00000580012 SGSM2O43147 1006 aa27.19■■□□□ 1.94
NDEL1-207ENST00000580012 RGMBQ6NW40 437 aa27.19■■□□□ 1.94
NDEL1-207ENST00000580012 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.19■■□□□ 1.94
NDEL1-207ENST00000580012 ARPP21Q9UBL0 812 aaPredicted RBP27.19■■□□□ 1.94
NDEL1-207ENST00000580012 WRNIP1Q96S55 665 aa27.18■■□□□ 1.94
NDEL1-207ENST00000580012 CYP2D7A0A087X1C5 515 aa27.17■■□□□ 1.94
NDEL1-207ENST00000580012 FAM196BA6NMK8 535 aa27.17■■□□□ 1.94
NDEL1-207ENST00000580012 SMIM22K7EJ46 135 aa27.17■■□□□ 1.94
NDEL1-207ENST00000580012 FGAP02671 866 aa27.17■■□□□ 1.94
NDEL1-207ENST00000580012 INPP5BP32019 993 aa27.17■■□□□ 1.94
NDEL1-207ENST00000580012 RRP1BQ14684 758 aaKnown RBP27.17■■□□□ 1.94
NDEL1-207ENST00000580012 SLC4A8Q2Y0W8 1093 aa27.17■■□□□ 1.94
NDEL1-207ENST00000580012 NOL9Q5SY16 702 aaKnown RBP27.17■■□□□ 1.94
NDEL1-207ENST00000580012 TATDN1Q6P1N9 297 aa27.17■■□□□ 1.94
NDEL1-207ENST00000580012 CLMNQ96JQ2 1002 aa27.17■■□□□ 1.94
NDEL1-207ENST00000580012 FOCADQ5VW36 1801 aa27.16■■□□□ 1.94
NDEL1-207ENST00000580012 PCNTO95613 3336 aa27.16■■□□□ 1.94
NDEL1-207ENST00000580012 CTNND1O60716 968 aaKnown RBP27.16■■□□□ 1.94
NDEL1-207ENST00000580012 TDO2P48775 406 aa27.16■■□□□ 1.94
NDEL1-207ENST00000580012 VGLL4Q14135 290 aa27.16■■□□□ 1.94
NDEL1-207ENST00000580012 COL13A1Q5TAT6 717 aaPredicted RBP27.16■■□□□ 1.94
NDEL1-207ENST00000580012 ZKSCAN4Q969J2 545 aaPredicted RBP27.16■■□□□ 1.94
NDEL1-207ENST00000580012 DSCC1Q9BVC3 393 aa27.16■■□□□ 1.94
NDEL1-207ENST00000580012 CDK5RAP2Q96SN8 1893 aa27.15■■□□□ 1.94
NDEL1-207ENST00000580012 CDC45O75419 566 aa27.15■■□□□ 1.94
NDEL1-207ENST00000580012 AMOTL1Q8IY63 956 aa27.15■■□□□ 1.94
NDEL1-207ENST00000580012 CRACR2BQ8N4Y2 399 aaPredicted RBP27.15■■□□□ 1.94
NDEL1-207ENST00000580012 SLC10A4Q96EP9 437 aa27.15■■□□□ 1.94
NDEL1-207ENST00000580012 ESYT1Q9BSJ8 1104 aa27.15■■□□□ 1.94
NDEL1-207ENST00000580012 NAPBQ9H115 298 aa27.15■■□□□ 1.94
NDEL1-207ENST00000580012 SNCAIPQ9Y6H5 919 aa27.15■■□□□ 1.94
NDEL1-207ENST00000580012 ZMYM6O95789 1325 aa27.15■■□□□ 1.94
NDEL1-207ENST00000580012 FAM155AB1AL88 458 aaPredicted RBP27.14■■□□□ 1.94
NDEL1-207ENST00000580012 SHMT1P34896 483 aa27.14■■□□□ 1.94
NDEL1-207ENST00000580012 ZNF157P51786 506 aaPredicted RBP27.14■■□□□ 1.94
NDEL1-207ENST00000580012 CCDC102AQ96A19 550 aa27.14■■□□□ 1.94
NDEL1-207ENST00000580012 DYNLL2Q96FJ2 89 aa27.14■■□□□ 1.94
NDEL1-207ENST00000580012 CAP2P40123 477 aa27.13■■□□□ 1.93
NDEL1-207ENST00000580012 C16orf86Q6ZW13 317 aa27.13■■□□□ 1.93
NDEL1-207ENST00000580012 SWAP70Q9UH65 585 aa27.13■■□□□ 1.93
NDEL1-207ENST00000580012 CSADQ9Y600 493 aa27.13■■□□□ 1.93
NDEL1-207ENST00000580012 MINDY4BA8MYZ0 360 aa27.12■■□□□ 1.93
NDEL1-207ENST00000580012 SLC10A3P09131 477 aa27.12■■□□□ 1.93
NDEL1-207ENST00000580012 HSPA1AP0DMV8 641 aaKnown RBP27.12■■□□□ 1.93
NDEL1-207ENST00000580012 HSPA1BP0DMV9 641 aaKnown RBP27.12■■□□□ 1.93
NDEL1-207ENST00000580012 CYP4F22Q6NT55 531 aa27.12■■□□□ 1.93
NDEL1-207ENST00000580012 RASAL3Q86YV0 1011 aa27.12■■□□□ 1.93
NDEL1-207ENST00000580012 SCYL3Q8IZE3 742 aa27.12■■□□□ 1.93
NDEL1-207ENST00000580012 ANAPC4Q9UJX5 808 aa27.12■■□□□ 1.93
NDEL1-207ENST00000580012 DDX60LQ5H9U9 1706 aaKnown RBP27.12■■□□□ 1.93
NDEL1-207ENST00000580012 CDK8P49336 464 aa27.11■■□□□ 1.93
NDEL1-207ENST00000580012 VEGFBP49765 207 aa27.11■■□□□ 1.93
NDEL1-207ENST00000580012 JAG1P78504 1218 aa27.11■■□□□ 1.93
NDEL1-207ENST00000580012 PPARAQ07869 468 aa27.11■■□□□ 1.93
NDEL1-207ENST00000580012 TRIM34Q9BYJ4 488 aa27.11■■□□□ 1.93
NDEL1-207ENST00000580012 GINM1Q9NU53 330 aa27.11■■□□□ 1.93
NDEL1-207ENST00000580012 ROBO3Q96MS0 1386 aa27.1■■□□□ 1.93
NDEL1-207ENST00000580012 SPDYE5A6NIY4 337 aa27.1■■□□□ 1.93
NDEL1-207ENST00000580012 ECE1P42892 770 aa27.1■■□□□ 1.93
NDEL1-207ENST00000580012 SLC44A5Q8NCS7 719 aa27.1■■□□□ 1.93
NDEL1-207ENST00000580012 CAPNS2Q96L46 248 aa27.1■■□□□ 1.93
NDEL1-207ENST00000580012 ELP3Q9H9T3 547 aa27.1■■□□□ 1.93
NDEL1-207ENST00000580012 PTH1RQ03431 593 aa27.09■■□□□ 1.93
NDEL1-207ENST00000580012 SPRYD7Q5W111 196 aa27.09■■□□□ 1.93
NDEL1-207ENST00000580012 ERO1BQ86YB8 467 aa27.09■■□□□ 1.93
NDEL1-207ENST00000580012 SIPA1L1O43166 1804 aa27.09■■□□□ 1.93
NDEL1-207ENST00000580012 FGRP09769 529 aa27.08■■□□□ 1.93
NDEL1-207ENST00000580012 GJA5P36382 358 aa27.08■■□□□ 1.93
NDEL1-207ENST00000580012 CERKLQ49MI3 558 aaPredicted RBP27.08■■□□□ 1.93
NDEL1-207ENST00000580012 CASC1Q6TDU7 716 aa27.08■■□□□ 1.93
NDEL1-207ENST00000580012 MAP4K1Q92918 833 aa27.08■■□□□ 1.93
NDEL1-207ENST00000580012 WNK4Q96J92 1243 aa27.08■■□□□ 1.93
NDEL1-207ENST00000580012 WDR33Q9C0J8 1336 aaKnown RBP27.08■■□□□ 1.93
NDEL1-207ENST00000580012 PTPRAP18433 802 aa27.07■■□□□ 1.92
NDEL1-207ENST00000580012 PPATQ06203 517 aa27.07■■□□□ 1.92
NDEL1-207ENST00000580012 CNKSR2Q8WXI2 1034 aa27.07■■□□□ 1.92
NDEL1-207ENST00000580012 LSG1Q9H089 658 aaKnown RBP27.07■■□□□ 1.92
NDEL1-207ENST00000580012 CTNNA3Q9UI47 895 aa27.07■■□□□ 1.92
NDEL1-207ENST00000580012 MYH1P12882 1939 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms