RNA–Protein interactions for RNA: ENST00000579647.1

CBX3P2-201, Transcript of chromobox 3 pseudogene 2, humanhuman

TSL 2 BASIC

Gene CBX3P2, Length 1,429 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P2-201ENST00000579647 DCP1AQ9NPI6 582 aaPredicted RBP20.45■□□□□ 0.86
CBX3P2-201ENST00000579647 SNCAIPQ9Y6H5 919 aa20.45■□□□□ 0.86
CBX3P2-201ENST00000579647 GJA5P36382 358 aa20.44■□□□□ 0.86
CBX3P2-201ENST00000579647 TTC6Q86TZ1 520 aa20.44■□□□□ 0.86
CBX3P2-201ENST00000579647 SKAP1Q86WV1 359 aa20.44■□□□□ 0.86
CBX3P2-201ENST00000579647 OPTNQ96CV9 577 aa20.44■□□□□ 0.86
CBX3P2-201ENST00000579647 ATP8A2Q9NTI2 1148 aa20.44■□□□□ 0.86
CBX3P2-201ENST00000579647 MCM9Q9NXL9 1143 aa20.44■□□□□ 0.86
CBX3P2-201ENST00000579647 OTOFQ9HC10 1997 aa20.44■□□□□ 0.86
CBX3P2-201ENST00000579647 GPAA1O43292 621 aa20.44■□□□□ 0.86
CBX3P2-201ENST00000579647 PLCD1P51178 756 aa20.44■□□□□ 0.86
CBX3P2-201ENST00000579647 TTC22Q5TAA0 569 aa20.44■□□□□ 0.86
CBX3P2-201ENST00000579647 HERC5Q9UII4 1024 aaKnown RBP20.44■□□□□ 0.86
CBX3P2-201ENST00000579647 MYH1P12882 1939 aa20.43■□□□□ 0.86
CBX3P2-201ENST00000579647 OTUD5Q96G74 571 aa20.43■□□□□ 0.86
CBX3P2-201ENST00000579647 TRIM34Q9BYJ4 488 aa20.43■□□□□ 0.86
CBX3P2-201ENST00000579647 CYP2D6P10635 497 aa20.42■□□□□ 0.86
CBX3P2-201ENST00000579647 GSPT1P15170 499 aaKnown RBP20.42■□□□□ 0.86
CBX3P2-201ENST00000579647 SDSP20132 328 aa20.42■□□□□ 0.86
CBX3P2-201ENST00000579647 MAP2K1Q02750 393 aaPredicted RBP20.42■□□□□ 0.86
CBX3P2-201ENST00000579647 EVX2Q03828 476 aa20.42■□□□□ 0.86
CBX3P2-201ENST00000579647 RRP1BQ14684 758 aaKnown RBP20.42■□□□□ 0.86
CBX3P2-201ENST00000579647 METTL16Q86W50 562 aaKnown RBP20.42■□□□□ 0.86
CBX3P2-201ENST00000579647 WBP1LQ9NX94 342 aa20.42■□□□□ 0.86
CBX3P2-201ENST00000579647 SPDYE5A6NIY4 337 aa20.41■□□□□ 0.86
CBX3P2-201ENST00000579647 GSG1L2A8MUP6 293 aa20.41■□□□□ 0.86
CBX3P2-201ENST00000579647 APPP05067 770 aa20.41■□□□□ 0.86
CBX3P2-201ENST00000579647 HSPA1AP0DMV8 641 aaKnown RBP20.41■□□□□ 0.86
CBX3P2-201ENST00000579647 HSPA1BP0DMV9 641 aaKnown RBP20.41■□□□□ 0.86
CBX3P2-201ENST00000579647 ZBTB48P10074 688 aaPredicted RBP20.41■□□□□ 0.86
CBX3P2-201ENST00000579647 NOL9Q5SY16 702 aaKnown RBP20.41■□□□□ 0.86
CBX3P2-201ENST00000579647 ERICH6BQ5W0A0 696 aa20.41■□□□□ 0.86
CBX3P2-201ENST00000579647 CCDC129Q6ZRS4 1044 aa20.41■□□□□ 0.86
CBX3P2-201ENST00000579647 ERO1BQ86YB8 467 aa20.41■□□□□ 0.86
CBX3P2-201ENST00000579647 SCYL3Q8IZE3 742 aa20.41■□□□□ 0.86
CBX3P2-201ENST00000579647 DDRGK1Q96HY6 314 aa20.41■□□□□ 0.86
CBX3P2-201ENST00000579647 FAM227BQ96M60 508 aa20.41■□□□□ 0.86
CBX3P2-201ENST00000579647 DNAJC18Q9H819 358 aa20.41■□□□□ 0.86
CBX3P2-201ENST00000579647 PPP4R2Q9NY27 417 aa20.41■□□□□ 0.86
CBX3P2-201ENST00000579647 SERPINB13Q9UIV8 391 aa20.41■□□□□ 0.86
CBX3P2-201ENST00000579647 USP17L12C9JPN9 530 aa20.4■□□□□ 0.86
CBX3P2-201ENST00000579647 USP17L21D6R901 530 aa20.4■□□□□ 0.86
CBX3P2-201ENST00000579647 CTNND1O60716 968 aaKnown RBP20.4■□□□□ 0.86
CBX3P2-201ENST00000579647 NMIQ13287 307 aaPredicted RBP20.4■□□□□ 0.86
CBX3P2-201ENST00000579647 HELLSQ9NRZ9 838 aa20.4■□□□□ 0.86
CBX3P2-201ENST00000579647 SIPA1L1O43166 1804 aa20.4■□□□□ 0.86
CBX3P2-201ENST00000579647 CYP2D7A0A087X1C5 515 aa20.39■□□□□ 0.85
CBX3P2-201ENST00000579647 A0A0D9SFI3 127 aa20.39■□□□□ 0.85
CBX3P2-201ENST00000579647 PATL2C9JE40 543 aaKnown RBP20.39■□□□□ 0.85
CBX3P2-201ENST00000579647 GNAT2P19087 354 aa20.39■□□□□ 0.85
CBX3P2-201ENST00000579647 CTR9Q6PD62 1173 aa20.39■□□□□ 0.85
CBX3P2-201ENST00000579647 TICAM2Q86XR7 235 aa20.39■□□□□ 0.85
CBX3P2-201ENST00000579647 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.39■□□□□ 0.85
CBX3P2-201ENST00000579647 NAV1Q8NEY1 1877 aa20.39■□□□□ 0.85
CBX3P2-201ENST00000579647 THSD7BQ9C0I4 1608 aa20.39■□□□□ 0.85
CBX3P2-201ENST00000579647 SMIM22K7EJ46 135 aa20.38■□□□□ 0.85
CBX3P2-201ENST00000579647 CAP2P40123 477 aa20.38■□□□□ 0.85
CBX3P2-201ENST00000579647 PPATQ06203 517 aa20.38■□□□□ 0.85
CBX3P2-201ENST00000579647 MCMDC2Q4G0Z9 681 aa20.38■□□□□ 0.85
CBX3P2-201ENST00000579647 CCDC84Q86UT8 332 aaPredicted RBP20.38■□□□□ 0.85
CBX3P2-201ENST00000579647 BEGAINQ9BUH8 593 aa20.38■□□□□ 0.85
CBX3P2-201ENST00000579647 EHD4Q9H223 541 aa20.38■□□□□ 0.85
CBX3P2-201ENST00000579647 PICK1Q9NRD5 415 aa20.38■□□□□ 0.85
CBX3P2-201ENST00000579647 MANSC4A6NHS7 340 aaPredicted RBP20.37■□□□□ 0.85
CBX3P2-201ENST00000579647 IRF6O14896 467 aa20.37■□□□□ 0.85
CBX3P2-201ENST00000579647 TM4SF4P48230 202 aa20.37■□□□□ 0.85
CBX3P2-201ENST00000579647 PPIL2Q13356 520 aa20.37■□□□□ 0.85
CBX3P2-201ENST00000579647 C12orf60Q5U649 245 aa20.37■□□□□ 0.85
CBX3P2-201ENST00000579647 AMOTL1Q8IY63 956 aa20.37■□□□□ 0.85
CBX3P2-201ENST00000579647 REM2Q8IYK8 340 aaPredicted RBP20.37■□□□□ 0.85
CBX3P2-201ENST00000579647 IFNL3Q8IZI9 196 aa20.37■□□□□ 0.85
CBX3P2-201ENST00000579647 DYNLL2Q96FJ2 89 aa20.37■□□□□ 0.85
CBX3P2-201ENST00000579647 ZHX2Q9Y6X8 837 aa20.37■□□□□ 0.85
CBX3P2-201ENST00000579647 BAZ2AQ9UIF9 1905 aaKnown RBP20.37■□□□□ 0.85
CBX3P2-201ENST00000579647 GDF11O95390 407 aa20.36■□□□□ 0.85
CBX3P2-201ENST00000579647 PTPRAP18433 802 aa20.36■□□□□ 0.85
CBX3P2-201ENST00000579647 JAG1P78504 1218 aa20.36■□□□□ 0.85
CBX3P2-201ENST00000579647 GABPAQ06546 454 aa20.36■□□□□ 0.85
CBX3P2-201ENST00000579647 SREBF2Q12772 1141 aa20.36■□□□□ 0.85
CBX3P2-201ENST00000579647 GIMAP6Q6P9H5 292 aa20.36■□□□□ 0.85
CBX3P2-201ENST00000579647 CWC27Q6UX04 472 aaKnown RBP20.36■□□□□ 0.85
CBX3P2-201ENST00000579647 MS4A4AQ96JQ5 239 aa20.36■□□□□ 0.85
CBX3P2-201ENST00000579647 EPB41L4AQ9HCS5 686 aaPredicted RBP20.36■□□□□ 0.85
CBX3P2-201ENST00000579647 DIAPH3Q9NSV4 1193 aa20.36■□□□□ 0.85
CBX3P2-201ENST00000579647 DDX60LQ5H9U9 1706 aaKnown RBP20.36■□□□□ 0.85
CBX3P2-201ENST00000579647 MINDY4BA8MYZ0 360 aa20.36■□□□□ 0.85
CBX3P2-201ENST00000579647 FOXN1O15353 648 aa20.36■□□□□ 0.85
CBX3P2-201ENST00000579647 SHMT1P34896 483 aa20.36■□□□□ 0.85
CBX3P2-201ENST00000579647 TDO2P48775 406 aa20.36■□□□□ 0.85
CBX3P2-201ENST00000579647 SHROOM1Q2M3G4 852 aaPredicted RBP20.36■□□□□ 0.85
CBX3P2-201ENST00000579647 TATDN1Q6P1N9 297 aa20.36■□□□□ 0.85
CBX3P2-201ENST00000579647 HIP1O00291 1037 aa20.35■□□□□ 0.85
CBX3P2-201ENST00000579647 GTF2A2P52657 109 aa20.35■□□□□ 0.85
CBX3P2-201ENST00000579647 INHBEP58166 350 aa20.35■□□□□ 0.85
CBX3P2-201ENST00000579647 CERKLQ49MI3 558 aaPredicted RBP20.35■□□□□ 0.85
CBX3P2-201ENST00000579647 SBK1Q52WX2 424 aa20.35■□□□□ 0.85
CBX3P2-201ENST00000579647 VPS53Q5VIR6 699 aa20.35■□□□□ 0.85
CBX3P2-201ENST00000579647 STK11IPQ8N1F8 1099 aa20.35■□□□□ 0.85
CBX3P2-201ENST00000579647 SLC44A5Q8NCS7 719 aa20.35■□□□□ 0.85
CBX3P2-201ENST00000579647 NACAP1Q9BZK3 213 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms