RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 CD2BP2O95400 341 aaKnown RBP16.41■□□□□ 0.22
TSEN54-206ENST00000579449 FGRP09769 529 aa16.41■□□□□ 0.22
TSEN54-206ENST00000579449 RRP12Q5JTH9 1297 aaKnown RBP16.41■□□□□ 0.22
TSEN54-206ENST00000579449 DHX32Q7L7V1 743 aaKnown RBP16.41■□□□□ 0.22
TSEN54-206ENST00000579449 SH3BP5LQ7L8J4 393 aa16.41■□□□□ 0.22
TSEN54-206ENST00000579449 MB21D2Q8IYB1 491 aaPredicted RBP16.41■□□□□ 0.22
TSEN54-206ENST00000579449 NKX2-3Q8TAU0 364 aa16.41■□□□□ 0.22
TSEN54-206ENST00000579449 TTC14Q96N46 770 aa16.41■□□□□ 0.22
TSEN54-206ENST00000579449 KRT23Q9C075 422 aa16.41■□□□□ 0.22
TSEN54-206ENST00000579449 CNNM2Q9H8M5 875 aa16.41■□□□□ 0.22
TSEN54-206ENST00000579449 ADARB2Q9NS39 739 aaKnown RBP16.41■□□□□ 0.22
TSEN54-206ENST00000579449 TOMM22Q9NS69 142 aa16.41■□□□□ 0.22
TSEN54-206ENST00000579449 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.41■□□□□ 0.22
TSEN54-206ENST00000579449 ASTN2O75129 1339 aaPredicted RBP16.41■□□□□ 0.22
TSEN54-206ENST00000579449 MYH8P13535 1937 aa16.41■□□□□ 0.22
TSEN54-206ENST00000579449 CNTNAP1P78357 1384 aa16.4■□□□□ 0.22
TSEN54-206ENST00000579449 DDTLA6NHG4 134 aaPredicted RBP16.4■□□□□ 0.22
TSEN54-206ENST00000579449 HLA-DOAP06340 250 aa16.4■□□□□ 0.22
TSEN54-206ENST00000579449 PCP11498 1178 aaKnown RBP16.4■□□□□ 0.22
TSEN54-206ENST00000579449 HIRAP54198 1017 aaPredicted RBP16.4■□□□□ 0.22
TSEN54-206ENST00000579449 EXOSC10Q01780 885 aaKnown RBP16.4■□□□□ 0.22
TSEN54-206ENST00000579449 PDE4BQ07343 736 aa16.4■□□□□ 0.22
TSEN54-206ENST00000579449 C16orf86Q6ZW13 317 aa16.4■□□□□ 0.22
TSEN54-206ENST00000579449 ZSCAN29Q8IWY8 852 aaPredicted RBP16.4■□□□□ 0.22
TSEN54-206ENST00000579449 IL27Q8NEV9 243 aa16.4■□□□□ 0.22
TSEN54-206ENST00000579449 FAM151AQ8WW52 585 aa16.4■□□□□ 0.22
TSEN54-206ENST00000579449 SNX21Q969T3 373 aa16.4■□□□□ 0.22
TSEN54-206ENST00000579449 TCEANC2Q96MN5 208 aa16.4■□□□□ 0.22
TSEN54-206ENST00000579449 DHX36Q9H2U1 1008 aaKnown RBP16.4■□□□□ 0.22
TSEN54-206ENST00000579449 HACL1Q9UJ83 578 aa16.4■□□□□ 0.22
TSEN54-206ENST00000579449 COL2A1P02458 1487 aaPredicted RBP16.4■□□□□ 0.22
TSEN54-206ENST00000579449 SCN4AP35499 1836 aa16.4■□□□□ 0.22
TSEN54-206ENST00000579449 ORC4O43929 436 aa16.39■□□□□ 0.21
TSEN54-206ENST00000579449 PRDM1O75626 825 aa16.39■□□□□ 0.21
TSEN54-206ENST00000579449 MCM5P33992 734 aa16.39■□□□□ 0.21
TSEN54-206ENST00000579449 CYB5R4Q7L1T6 521 aa16.39■□□□□ 0.21
TSEN54-206ENST00000579449 CHST3Q7LGC8 479 aa16.39■□□□□ 0.21
TSEN54-206ENST00000579449 FAM83AQ86UY5 434 aa16.39■□□□□ 0.21
TSEN54-206ENST00000579449 WDR90Q96KV7 1748 aa16.39■□□□□ 0.21
TSEN54-206ENST00000579449 ATRNL1Q5VV63 1379 aa16.38■□□□□ 0.21
TSEN54-206ENST00000579449 PRC1O43663 620 aa16.38■□□□□ 0.21
TSEN54-206ENST00000579449 KDM4AO75164 1064 aa16.38■□□□□ 0.21
TSEN54-206ENST00000579449 TNNI2P48788 182 aa16.38■□□□□ 0.21
TSEN54-206ENST00000579449 CDK8P49336 464 aa16.38■□□□□ 0.21
TSEN54-206ENST00000579449 AK2P54819 239 aa16.38■□□□□ 0.21
TSEN54-206ENST00000579449 ANTXR2P58335 489 aa16.38■□□□□ 0.21
TSEN54-206ENST00000579449 GABPAQ06546 454 aa16.38■□□□□ 0.21
TSEN54-206ENST00000579449 Q6ZUG5 572 aa16.38■□□□□ 0.21
TSEN54-206ENST00000579449 HSCBQ8IWL3 235 aa16.38■□□□□ 0.21
TSEN54-206ENST00000579449 SLC44A5Q8NCS7 719 aa16.38■□□□□ 0.21
TSEN54-206ENST00000579449 ESR2Q92731 530 aa16.38■□□□□ 0.21
TSEN54-206ENST00000579449 LRRC2Q9BYS8 371 aa16.38■□□□□ 0.21
TSEN54-206ENST00000579449 TBC1D2Q9BYX2 928 aa16.38■□□□□ 0.21
TSEN54-206ENST00000579449 ALDH8A1Q9H2A2 487 aaPredicted RBP16.38■□□□□ 0.21
TSEN54-206ENST00000579449 MKNK2Q9HBH9 465 aa16.38■□□□□ 0.21
TSEN54-206ENST00000579449 ZSWIM5Q9P217 1185 aa16.38■□□□□ 0.21
TSEN54-206ENST00000579449 RANBP6O60518 1105 aaKnown RBP16.37■□□□□ 0.21
TSEN54-206ENST00000579449 TNFAIP1Q13829 316 aa16.37■□□□□ 0.21
TSEN54-206ENST00000579449 BECN1Q14457 450 aa16.37■□□□□ 0.21
TSEN54-206ENST00000579449 ANGEL2Q5VTE6 544 aaKnown RBP16.37■□□□□ 0.21
TSEN54-206ENST00000579449 TMEM39BQ9GZU3 492 aa16.37■□□□□ 0.21
TSEN54-206ENST00000579449 EHD4Q9H223 541 aa16.37■□□□□ 0.21
TSEN54-206ENST00000579449 PI4KBQ9UBF8 816 aa16.37■□□□□ 0.21
TSEN54-206ENST00000579449 SERPINB13Q9UIV8 391 aa16.37■□□□□ 0.21
TSEN54-206ENST00000579449 SCAF8Q9UPN6 1271 aaKnown RBP16.37■□□□□ 0.21
TSEN54-206ENST00000579449 WDR19Q8NEZ3 1342 aa16.37■□□□□ 0.21
TSEN54-206ENST00000579449 SLURP2P0DP57 97 aa16.36■□□□□ 0.21
TSEN54-206ENST00000579449 EPHX2P34913 555 aa16.36■□□□□ 0.21
TSEN54-206ENST00000579449 TOB2Q14106 344 aaPredicted RBP16.36■□□□□ 0.21
TSEN54-206ENST00000579449 RASA3Q14644 834 aa16.36■□□□□ 0.21
TSEN54-206ENST00000579449 NOL8Q76FK4 1167 aaKnown RBP16.36■□□□□ 0.21
TSEN54-206ENST00000579449 APOBEC3FQ8IUX4 373 aaKnown RBP16.36■□□□□ 0.21
TSEN54-206ENST00000579449 FOXP4Q8IVH2 680 aaPredicted RBP16.36■□□□□ 0.21
TSEN54-206ENST00000579449 CRACR2BQ8N4Y2 399 aaPredicted RBP16.36■□□□□ 0.21
TSEN54-206ENST00000579449 CSRNP1Q96S65 589 aa16.36■□□□□ 0.21
TSEN54-206ENST00000579449 ZNF287Q9HBT7 754 aa16.36■□□□□ 0.21
TSEN54-206ENST00000579449 GGA3Q9NZ52 723 aa16.36■□□□□ 0.21
TSEN54-206ENST00000579449 SWAP70Q9UH65 585 aa16.36■□□□□ 0.21
TSEN54-206ENST00000579449 PGAP2Q9UHJ9 254 aa16.36■□□□□ 0.21
TSEN54-206ENST00000579449 POTECB2RU33 542 aa16.35■□□□□ 0.21
TSEN54-206ENST00000579449 RASA1P20936 1047 aa16.35■□□□□ 0.21
TSEN54-206ENST00000579449 MCM2P49736 904 aa16.35■□□□□ 0.21
TSEN54-206ENST00000579449 FGD1P98174 961 aa16.35■□□□□ 0.21
TSEN54-206ENST00000579449 ANKRD1Q15327 319 aa16.35■□□□□ 0.21
TSEN54-206ENST00000579449 FAM47AQ5JRC9 791 aa16.35■□□□□ 0.21
TSEN54-206ENST00000579449 USP50Q70EL3 339 aaPredicted RBP16.35■□□□□ 0.21
TSEN54-206ENST00000579449 METTL16Q86W50 562 aaKnown RBP16.35■□□□□ 0.21
TSEN54-206ENST00000579449 ZNF444Q8N0Y2 327 aaPredicted RBP16.35■□□□□ 0.21
TSEN54-206ENST00000579449 IPO9Q96P70 1041 aaKnown RBP16.35■□□□□ 0.21
TSEN54-206ENST00000579449 LARP6Q9BRS8 491 aaKnown RBP16.35■□□□□ 0.21
TSEN54-206ENST00000579449 IQCA1LA6NCM1 817 aa16.34■□□□□ 0.21
TSEN54-206ENST00000579449 TSPY2A6NKD2 308 aa16.34■□□□□ 0.21
TSEN54-206ENST00000579449 K7ELQ4 463 aaPredicted RBP16.34■□□□□ 0.21
TSEN54-206ENST00000579449 SHMT1P34896 483 aa16.34■□□□□ 0.21
TSEN54-206ENST00000579449 NT5C2P49902 561 aa16.34■□□□□ 0.21
TSEN54-206ENST00000579449 TFAP4Q01664 338 aa16.34■□□□□ 0.21
TSEN54-206ENST00000579449 CDAN1Q8IWY9 1227 aa16.34■□□□□ 0.21
TSEN54-206ENST00000579449 IGDCC4Q8TDY8 1250 aa16.34■□□□□ 0.21
TSEN54-206ENST00000579449 TMEM87BQ96K49 555 aa16.34■□□□□ 0.21
TSEN54-206ENST00000579449 ZKSCAN3Q9BRR0 538 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms