RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 NEDD4P46934 1319 aa19.9■□□□□ 0.78
SREBF1-218ENST00000578469 DHX16O60231 1041 aaKnown RBP19.89■□□□□ 0.77
SREBF1-218ENST00000578469 PLCG2P16885 1265 aa19.89■□□□□ 0.77
SREBF1-218ENST00000578469 SYT1P21579 422 aa19.89■□□□□ 0.77
SREBF1-218ENST00000578469 COL4A5P29400 1685 aa19.89■□□□□ 0.77
SREBF1-218ENST00000578469 PDIA3P30101 505 aaKnown RBP19.89■□□□□ 0.77
SREBF1-218ENST00000578469 SART3Q15020 963 aaKnown RBP19.89■□□□□ 0.77
SREBF1-218ENST00000578469 CYB5R4Q7L1T6 521 aa19.89■□□□□ 0.77
SREBF1-218ENST00000578469 TRPM7Q96QT4 1865 aa19.89■□□□□ 0.77
SREBF1-218ENST00000578469 ARPP21Q9UBL0 812 aaPredicted RBP19.89■□□□□ 0.77
SREBF1-218ENST00000578469 KLF18A0A0U1RQI7 1052 aa19.88■□□□□ 0.77
SREBF1-218ENST00000578469 PPIP5K2O43314 1243 aa19.88■□□□□ 0.77
SREBF1-218ENST00000578469 ZSCAN22P10073 491 aaPredicted RBP19.88■□□□□ 0.77
SREBF1-218ENST00000578469 EPS15P42566 896 aa19.88■□□□□ 0.77
SREBF1-218ENST00000578469 USP5P45974 858 aa19.88■□□□□ 0.77
SREBF1-218ENST00000578469 HMGN5P82970 282 aaKnown RBP19.88■□□□□ 0.77
SREBF1-218ENST00000578469 SCRN1Q12765 414 aa19.88■□□□□ 0.77
SREBF1-218ENST00000578469 DOK7Q18PE1 504 aa19.88■□□□□ 0.77
SREBF1-218ENST00000578469 SBK1Q52WX2 424 aa19.88■□□□□ 0.77
SREBF1-218ENST00000578469 RRP12Q5JTH9 1297 aaKnown RBP19.88■□□□□ 0.77
SREBF1-218ENST00000578469 LARP1BQ659C4 914 aaKnown RBP19.88■□□□□ 0.77
SREBF1-218ENST00000578469 PODNQ7Z5L7 613 aa19.88■□□□□ 0.77
SREBF1-218ENST00000578469 AMOTL1Q8IY63 956 aa19.88■□□□□ 0.77
SREBF1-218ENST00000578469 FBXW7Q969H0 707 aa19.88■□□□□ 0.77
SREBF1-218ENST00000578469 FAM163AQ96GL9 167 aaPredicted RBP19.88■□□□□ 0.77
SREBF1-218ENST00000578469 RTFDC1Q9BY42 306 aaPredicted RBP19.88■□□□□ 0.77
SREBF1-218ENST00000578469 DCP1AQ9NPI6 582 aaPredicted RBP19.88■□□□□ 0.77
SREBF1-218ENST00000578469 ATP6V1DQ9Y5K8 247 aa19.88■□□□□ 0.77
SREBF1-218ENST00000578469 ERICH2A1L162 156 aa19.87■□□□□ 0.77
SREBF1-218ENST00000578469 SH2B2O14492 632 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-218ENST00000578469 KDM4AO75164 1064 aa19.87■□□□□ 0.77
SREBF1-218ENST00000578469 DIXDC1Q155Q3 683 aa19.87■□□□□ 0.77
SREBF1-218ENST00000578469 GRIK5Q16478 980 aa19.87■□□□□ 0.77
SREBF1-218ENST00000578469 SKOR2Q2VWA4 1001 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-218ENST00000578469 TMEM67Q5HYA8 995 aa19.87■□□□□ 0.77
SREBF1-218ENST00000578469 FOXD4L5Q5VV16 416 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-218ENST00000578469 CTR9Q6PD62 1173 aa19.87■□□□□ 0.77
SREBF1-218ENST00000578469 FAM184AQ8NB25 1140 aa19.87■□□□□ 0.77
SREBF1-218ENST00000578469 FOXD4L4Q8WXT5 416 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-218ENST00000578469 ESR2Q92731 530 aa19.87■□□□□ 0.77
SREBF1-218ENST00000578469 VPS33BQ9H267 617 aa19.87■□□□□ 0.77
SREBF1-218ENST00000578469 ADARB2Q9NS39 739 aaKnown RBP19.87■□□□□ 0.77
SREBF1-218ENST00000578469 GPR75-ASB3A0A0A6YYF3 556 aa19.86■□□□□ 0.77
SREBF1-218ENST00000578469 USP17L12C9JPN9 530 aa19.86■□□□□ 0.77
SREBF1-218ENST00000578469 USP17L21D6R901 530 aa19.86■□□□□ 0.77
SREBF1-218ENST00000578469 IFIT3O14879 490 aaKnown RBP19.86■□□□□ 0.77
SREBF1-218ENST00000578469 NT5C2P49902 561 aa19.86■□□□□ 0.77
SREBF1-218ENST00000578469 CCT2P78371 535 aaKnown RBP19.86■□□□□ 0.77
SREBF1-218ENST00000578469 CYP4F22Q6NT55 531 aa19.86■□□□□ 0.77
SREBF1-218ENST00000578469 ZSWIM5Q9P217 1185 aa19.86■□□□□ 0.77
SREBF1-218ENST00000578469 TLL2Q9Y6L7 1015 aa19.86■□□□□ 0.77
SREBF1-218ENST00000578469 GOLGA8BA8MQT2 603 aa19.85■□□□□ 0.77
SREBF1-218ENST00000578469 LIFRP42702 1097 aa19.85■□□□□ 0.77
SREBF1-218ENST00000578469 BTDP43251 543 aa19.85■□□□□ 0.77
SREBF1-218ENST00000578469 MCTP1Q6DN14 999 aa19.85■□□□□ 0.77
SREBF1-218ENST00000578469 SYNE3Q6ZMZ3 975 aa19.85■□□□□ 0.77
SREBF1-218ENST00000578469 NFXL1Q6ZNB6 911 aa19.85■□□□□ 0.77
SREBF1-218ENST00000578469 TMTC2Q8N394 836 aa19.85■□□□□ 0.77
SREBF1-218ENST00000578469 SMARCC2Q8TAQ2 1214 aa19.85■□□□□ 0.77
SREBF1-218ENST00000578469 SH3RF3Q8TEJ3 882 aaPredicted RBP19.85■□□□□ 0.77
SREBF1-218ENST00000578469 GPHNQ9NQX3 736 aaPredicted RBP19.85■□□□□ 0.77
SREBF1-218ENST00000578469 GAKO14976 1311 aa19.84■□□□□ 0.77
SREBF1-218ENST00000578469 TRAF5O00463 557 aa19.84■□□□□ 0.77
SREBF1-218ENST00000578469 CA12O43570 354 aa19.84■□□□□ 0.77
SREBF1-218ENST00000578469 MAP2K2P36507 400 aa19.84■□□□□ 0.77
SREBF1-218ENST00000578469 AOC3Q16853 763 aa19.84■□□□□ 0.77
SREBF1-218ENST00000578469 IGDCC4Q8TDY8 1250 aa19.84■□□□□ 0.77
SREBF1-218ENST00000578469 UBAC1Q9BSL1 405 aa19.84■□□□□ 0.77
SREBF1-218ENST00000578469 INCENPQ9NQS7 918 aa19.84■□□□□ 0.77
SREBF1-218ENST00000578469 MCM9Q9NXL9 1143 aa19.84■□□□□ 0.77
SREBF1-218ENST00000578469 GPRC5DQ9NZD1 345 aa19.84■□□□□ 0.77
SREBF1-218ENST00000578469 BRPF3Q9ULD4 1205 aa19.84■□□□□ 0.77
SREBF1-218ENST00000578469 MTMR6Q9Y217 621 aa19.84■□□□□ 0.77
SREBF1-218ENST00000578469 VPS37CA5D8V6 355 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-218ENST00000578469 CCDC69A6NI79 296 aa19.83■□□□□ 0.77
SREBF1-218ENST00000578469 TRAK2O60296 914 aa19.83■□□□□ 0.77
SREBF1-218ENST00000578469 F13A1P00488 732 aa19.83■□□□□ 0.77
SREBF1-218ENST00000578469 FGRP09769 529 aa19.83■□□□□ 0.77
SREBF1-218ENST00000578469 FKBP1AP62942 108 aaKnown RBP19.83■□□□□ 0.77
SREBF1-218ENST00000578469 PDE4BQ07343 736 aa19.83■□□□□ 0.77
SREBF1-218ENST00000578469 CPLX2Q6PUV4 134 aaKnown RBP19.83■□□□□ 0.77
SREBF1-218ENST00000578469 SGMS1Q86VZ5 419 aa19.83■□□□□ 0.77
SREBF1-218ENST00000578469 TEX11Q8IYF3 940 aa19.83■□□□□ 0.77
SREBF1-218ENST00000578469 STK11IPQ8N1F8 1099 aa19.83■□□□□ 0.77
SREBF1-218ENST00000578469 NSUN7Q8NE18 718 aaKnown RBP19.83■□□□□ 0.77
SREBF1-218ENST00000578469 TACC3Q9Y6A5 838 aa19.83■□□□□ 0.77
SREBF1-218ENST00000578469 PTPDC1A2A3K4 754 aa19.82■□□□□ 0.76
SREBF1-218ENST00000578469 CCDC85CA6NKD9 419 aa19.82■□□□□ 0.76
SREBF1-218ENST00000578469 CPLX1O14810 134 aa19.82■□□□□ 0.76
SREBF1-218ENST00000578469 ZBTB43O43298 467 aa19.82■□□□□ 0.76
SREBF1-218ENST00000578469 ORC4O43929 436 aa19.82■□□□□ 0.76
SREBF1-218ENST00000578469 JAK2O60674 1132 aa19.82■□□□□ 0.76
SREBF1-218ENST00000578469 FMR1Q06787 632 aaKnown RBP eCLIP19.82■□□□□ 0.76
SREBF1-218ENST00000578469 WTAPQ15007 396 aa19.82■□□□□ 0.76
SREBF1-218ENST00000578469 DBNDD1Q9H9R9 158 aa19.82■□□□□ 0.76
SREBF1-218ENST00000578469 LY9Q9HBG7 655 aa19.82■□□□□ 0.76
SREBF1-218ENST00000578469 ZNRF3Q9ULT6 936 aa19.82■□□□□ 0.76
SREBF1-218ENST00000578469 SLC12A7Q9Y666 1083 aa19.82■□□□□ 0.76
SREBF1-218ENST00000578469 MYH2Q9UKX2 1941 aa19.81■□□□□ 0.76
SREBF1-218ENST00000578469 CYP2D7A0A087X1C5 515 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms