RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 APPBP2Q92624 585 aa18.91■□□□□ 0.62
NCBP3-207ENST00000577169 EVI5LQ96CN4 794 aa18.91■□□□□ 0.62
NCBP3-207ENST00000577169 OTUD5Q96G74 571 aa18.91■□□□□ 0.62
NCBP3-207ENST00000577169 OSBPL3Q9H4L5 887 aa18.91■□□□□ 0.62
NCBP3-207ENST00000577169 RNF186Q9NXI6 227 aa18.91■□□□□ 0.62
NCBP3-207ENST00000577169 HERC5Q9UII4 1024 aaKnown RBP18.91■□□□□ 0.62
NCBP3-207ENST00000577169 MYH1P12882 1939 aa18.91■□□□□ 0.62
NCBP3-207ENST00000577169 CTNND1O60716 968 aaKnown RBP18.9■□□□□ 0.62
NCBP3-207ENST00000577169 TRPA1O75762 1119 aa18.9■□□□□ 0.62
NCBP3-207ENST00000577169 POLR3DP05423 398 aaPredicted RBP18.9■□□□□ 0.62
NCBP3-207ENST00000577169 HLA-DOAP06340 250 aa18.9■□□□□ 0.62
NCBP3-207ENST00000577169 PDE4AP27815 886 aa18.9■□□□□ 0.62
NCBP3-207ENST00000577169 CTCFP49711 727 aaPredicted RBP18.9■□□□□ 0.62
NCBP3-207ENST00000577169 INHBEP58166 350 aa18.9■□□□□ 0.62
NCBP3-207ENST00000577169 METTL16Q86W50 562 aaKnown RBP18.9■□□□□ 0.62
NCBP3-207ENST00000577169 STRBPQ96SI9 672 aaKnown RBP18.9■□□□□ 0.62
NCBP3-207ENST00000577169 DCP1AQ9NPI6 582 aaPredicted RBP18.9■□□□□ 0.62
NCBP3-207ENST00000577169 TSKSQ9UJT2 592 aa18.9■□□□□ 0.62
NCBP3-207ENST00000577169 PPATQ06203 517 aa18.89■□□□□ 0.61
NCBP3-207ENST00000577169 SREBF2Q12772 1141 aa18.89■□□□□ 0.61
NCBP3-207ENST00000577169 RRP1BQ14684 758 aaKnown RBP18.89■□□□□ 0.61
NCBP3-207ENST00000577169 TTC6Q86TZ1 520 aa18.89■□□□□ 0.61
NCBP3-207ENST00000577169 SCYL3Q8IZE3 742 aa18.89■□□□□ 0.61
NCBP3-207ENST00000577169 CRACR2BQ8N4Y2 399 aaPredicted RBP18.89■□□□□ 0.61
NCBP3-207ENST00000577169 MS4A4AQ96JQ5 239 aa18.89■□□□□ 0.61
NCBP3-207ENST00000577169 ATP8A2Q9NTI2 1148 aa18.89■□□□□ 0.61
NCBP3-207ENST00000577169 MCM9Q9NXL9 1143 aa18.89■□□□□ 0.61
NCBP3-207ENST00000577169 SLC4A4Q9Y6R1 1079 aa18.89■□□□□ 0.61
NCBP3-207ENST00000577169 TRIM6-TRIM34B2RNG4 842 aa18.88■□□□□ 0.61
NCBP3-207ENST00000577169 IRF6O14896 467 aa18.88■□□□□ 0.61
NCBP3-207ENST00000577169 CA12O43570 354 aa18.88■□□□□ 0.61
NCBP3-207ENST00000577169 CENPBP07199 599 aaPredicted RBP18.88■□□□□ 0.61
NCBP3-207ENST00000577169 HSPA8P11142 646 aaKnown RBP18.88■□□□□ 0.61
NCBP3-207ENST00000577169 PLCD1P51178 756 aa18.88■□□□□ 0.61
NCBP3-207ENST00000577169 LBX1P52954 281 aa18.88■□□□□ 0.61
NCBP3-207ENST00000577169 PPIL2Q13356 520 aa18.88■□□□□ 0.61
NCBP3-207ENST00000577169 RILPL2Q969X0 211 aa18.88■□□□□ 0.61
NCBP3-207ENST00000577169 SEC62Q99442 399 aaKnown RBP18.88■□□□□ 0.61
NCBP3-207ENST00000577169 TRIM34Q9BYJ4 488 aa18.88■□□□□ 0.61
NCBP3-207ENST00000577169 DNAJC18Q9H819 358 aa18.88■□□□□ 0.61
NCBP3-207ENST00000577169 PICK1Q9NRD5 415 aa18.88■□□□□ 0.61
NCBP3-207ENST00000577169 SIPA1L1O43166 1804 aa18.88■□□□□ 0.61
NCBP3-207ENST00000577169 TESPA1A2RU30 521 aaPredicted RBP18.87■□□□□ 0.61
NCBP3-207ENST00000577169 M0R2C6 588 aa18.87■□□□□ 0.61
NCBP3-207ENST00000577169 PTPRAP18433 802 aa18.87■□□□□ 0.61
NCBP3-207ENST00000577169 CAP2P40123 477 aa18.87■□□□□ 0.61
NCBP3-207ENST00000577169 GTF2A2P52657 109 aa18.87■□□□□ 0.61
NCBP3-207ENST00000577169 ZMYM1Q5SVZ6 1142 aa18.87■□□□□ 0.61
NCBP3-207ENST00000577169 GPAA1O43292 621 aa18.86■□□□□ 0.61
NCBP3-207ENST00000577169 CYP2D6P10635 497 aa18.86■□□□□ 0.61
NCBP3-207ENST00000577169 EVX2Q03828 476 aa18.86■□□□□ 0.61
NCBP3-207ENST00000577169 IFNL1Q8IU54 200 aa18.86■□□□□ 0.61
NCBP3-207ENST00000577169 PTPN18Q99952 460 aa18.86■□□□□ 0.61
NCBP3-207ENST00000577169 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.86■□□□□ 0.61
NCBP3-207ENST00000577169 SERPINB13Q9UIV8 391 aa18.86■□□□□ 0.61
NCBP3-207ENST00000577169 ZHX2Q9Y6X8 837 aa18.86■□□□□ 0.61
NCBP3-207ENST00000577169 CCL15-CCL14A0A0B4J2E2 113 aa18.85■□□□□ 0.61
NCBP3-207ENST00000577169 GSG1L2A8MUP6 293 aa18.85■□□□□ 0.61
NCBP3-207ENST00000577169 USP17L12C9JPN9 530 aa18.85■□□□□ 0.61
NCBP3-207ENST00000577169 USP17L21D6R901 530 aa18.85■□□□□ 0.61
NCBP3-207ENST00000577169 IGF2BP3O00425 579 aaKnown RBP eCLIP18.85■□□□□ 0.61
NCBP3-207ENST00000577169 JAG1P78504 1218 aa18.85■□□□□ 0.61
NCBP3-207ENST00000577169 SNAPC2Q13487 334 aa18.85■□□□□ 0.61
NCBP3-207ENST00000577169 CCL15Q16663 113 aa18.85■□□□□ 0.61
NCBP3-207ENST00000577169 CCDC84Q86UT8 332 aaPredicted RBP18.85■□□□□ 0.61
NCBP3-207ENST00000577169 BRI3BPQ8WY22 251 aa18.85■□□□□ 0.61
NCBP3-207ENST00000577169 EHD4Q9H223 541 aa18.85■□□□□ 0.61
NCBP3-207ENST00000577169 SAGE1Q9NXZ1 904 aa18.85■□□□□ 0.61
NCBP3-207ENST00000577169 TBC1D8O95759 1140 aa18.84■□□□□ 0.61
NCBP3-207ENST00000577169 NEFLP07196 543 aa18.84■□□□□ 0.61
NCBP3-207ENST00000577169 CETPP11597 493 aa18.84■□□□□ 0.61
NCBP3-207ENST00000577169 TATDN1Q6P1N9 297 aa18.84■□□□□ 0.61
NCBP3-207ENST00000577169 DDRGK1Q96HY6 314 aa18.84■□□□□ 0.61
NCBP3-207ENST00000577169 KCNH4Q9UQ05 1017 aa18.84■□□□□ 0.61
NCBP3-207ENST00000577169 AFG3L2Q9Y4W6 797 aa18.84■□□□□ 0.61
NCBP3-207ENST00000577169 NAV1Q8NEY1 1877 aa18.84■□□□□ 0.61
NCBP3-207ENST00000577169 BAZ2AQ9UIF9 1905 aaKnown RBP18.83■□□□□ 0.6
NCBP3-207ENST00000577169 CYP2D7A0A087X1C5 515 aa18.83■□□□□ 0.6
NCBP3-207ENST00000577169 PATL2C9JE40 543 aaKnown RBP18.83■□□□□ 0.6
NCBP3-207ENST00000577169 CXCL11O14625 94 aa18.83■□□□□ 0.6
NCBP3-207ENST00000577169 GABPAQ06546 454 aa18.83■□□□□ 0.6
NCBP3-207ENST00000577169 C12orf60Q5U649 245 aa18.83■□□□□ 0.6
NCBP3-207ENST00000577169 OTUD7BQ6GQQ9 843 aa18.83■□□□□ 0.6
NCBP3-207ENST00000577169 CTR9Q6PD62 1173 aa18.83■□□□□ 0.6
NCBP3-207ENST00000577169 PRDM10Q9NQV6 1147 aa18.83■□□□□ 0.6
NCBP3-207ENST00000577169 DOCK1Q14185 1865 aa18.82■□□□□ 0.6
NCBP3-207ENST00000577169 SMIM22K7EJ46 135 aa18.82■□□□□ 0.6
NCBP3-207ENST00000577169 GDF11O95390 407 aa18.82■□□□□ 0.6
NCBP3-207ENST00000577169 ALDH1A1P00352 501 aa18.82■□□□□ 0.6
NCBP3-207ENST00000577169 APPP05067 770 aa18.82■□□□□ 0.6
NCBP3-207ENST00000577169 GNAT2P19087 354 aa18.82■□□□□ 0.6
NCBP3-207ENST00000577169 SHROOM1Q2M3G4 852 aaPredicted RBP18.82■□□□□ 0.6
NCBP3-207ENST00000577169 GIMAP6Q6P9H5 292 aa18.82■□□□□ 0.6
NCBP3-207ENST00000577169 CCDC129Q6ZRS4 1044 aa18.82■□□□□ 0.6
NCBP3-207ENST00000577169 TICAM2Q86XR7 235 aa18.82■□□□□ 0.6
NCBP3-207ENST00000577169 DYNLL2Q96FJ2 89 aa18.82■□□□□ 0.6
NCBP3-207ENST00000577169 R3HDMLQ9H3Y0 253 aa18.82■□□□□ 0.6
NCBP3-207ENST00000577169 HELLSQ9NRZ9 838 aa18.82■□□□□ 0.6
NCBP3-207ENST00000577169 LAMB1P07942 1786 aa18.82■□□□□ 0.6
NCBP3-207ENST00000577169 USP17L5A8MUK1 530 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms