RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 ZKSCAN4Q969J2 545 aaPredicted RBP18.27■□□□□ 0.52
LITAF-217ENST00000575426 OSBP2Q969R2 916 aa18.27■□□□□ 0.52
LITAF-217ENST00000575426 MCM9Q9NXL9 1143 aa18.27■□□□□ 0.52
LITAF-217ENST00000575426 ZNF112Q9UJU3 913 aa18.27■□□□□ 0.52
LITAF-217ENST00000575426 SIPA1L1O43166 1804 aa18.26■□□□□ 0.51
LITAF-217ENST00000575426 ZBTB48P10074 688 aaPredicted RBP18.26■□□□□ 0.51
LITAF-217ENST00000575426 GNAT2P19087 354 aa18.26■□□□□ 0.51
LITAF-217ENST00000575426 INPP5BP32019 993 aa18.26■□□□□ 0.51
LITAF-217ENST00000575426 SPRYD7Q5W111 196 aa18.26■□□□□ 0.51
LITAF-217ENST00000575426 WNK4Q96J92 1243 aa18.26■□□□□ 0.51
LITAF-217ENST00000575426 STRBPQ96SI9 672 aaKnown RBP18.26■□□□□ 0.51
LITAF-217ENST00000575426 DOCK1Q14185 1865 aa18.26■□□□□ 0.51
LITAF-217ENST00000575426 THSD7BQ9C0I4 1608 aa18.26■□□□□ 0.51
LITAF-217ENST00000575426 PRKAB2O43741 272 aa18.25■□□□□ 0.51
LITAF-217ENST00000575426 CTNND1O60716 968 aaKnown RBP18.25■□□□□ 0.51
LITAF-217ENST00000575426 SLC4A8Q2Y0W8 1093 aa18.25■□□□□ 0.51
LITAF-217ENST00000575426 ZMYM1Q5SVZ6 1142 aa18.25■□□□□ 0.51
LITAF-217ENST00000575426 ERO1BQ86YB8 467 aa18.25■□□□□ 0.51
LITAF-217ENST00000575426 OPTNQ96CV9 577 aa18.25■□□□□ 0.51
LITAF-217ENST00000575426 DCP1AQ9NPI6 582 aaPredicted RBP18.25■□□□□ 0.51
LITAF-217ENST00000575426 PICK1Q9NRD5 415 aa18.25■□□□□ 0.51
LITAF-217ENST00000575426 FAM196BA6NMK8 535 aa18.24■□□□□ 0.51
LITAF-217ENST00000575426 PHF20L1A8MW92 1017 aa18.24■□□□□ 0.51
LITAF-217ENST00000575426 M0R2C6 588 aa18.24■□□□□ 0.51
LITAF-217ENST00000575426 HIP1O00291 1037 aa18.24■□□□□ 0.51
LITAF-217ENST00000575426 GPAA1O43292 621 aa18.24■□□□□ 0.51
LITAF-217ENST00000575426 APPP05067 770 aa18.24■□□□□ 0.51
LITAF-217ENST00000575426 TTC22Q5TAA0 569 aa18.24■□□□□ 0.51
LITAF-217ENST00000575426 OTUD5Q96G74 571 aa18.24■□□□□ 0.51
LITAF-217ENST00000575426 HELLSQ9NRZ9 838 aa18.24■□□□□ 0.51
LITAF-217ENST00000575426 PPP4R2Q9NY27 417 aa18.24■□□□□ 0.51
LITAF-217ENST00000575426 SERPINB13Q9UIV8 391 aa18.24■□□□□ 0.51
LITAF-217ENST00000575426 SNCAIPQ9Y6H5 919 aa18.24■□□□□ 0.51
LITAF-217ENST00000575426 DDX60LQ5H9U9 1706 aaKnown RBP18.23■□□□□ 0.51
LITAF-217ENST00000575426 MANSC4A6NHS7 340 aaPredicted RBP18.23■□□□□ 0.51
LITAF-217ENST00000575426 SREBF2Q12772 1141 aa18.23■□□□□ 0.51
LITAF-217ENST00000575426 NOL9Q5SY16 702 aaKnown RBP18.23■□□□□ 0.51
LITAF-217ENST00000575426 SCYL3Q8IZE3 742 aa18.23■□□□□ 0.51
LITAF-217ENST00000575426 ZIC5Q96T25 663 aa18.23■□□□□ 0.51
LITAF-217ENST00000575426 SEC62Q99442 399 aaKnown RBP18.23■□□□□ 0.51
LITAF-217ENST00000575426 LAMB1P07942 1786 aa18.22■□□□□ 0.51
LITAF-217ENST00000575426 SPDYE5A6NIY4 337 aa18.22■□□□□ 0.51
LITAF-217ENST00000575426 PATL2C9JE40 543 aaKnown RBP18.22■□□□□ 0.51
LITAF-217ENST00000575426 SLURP2P0DP57 97 aa18.22■□□□□ 0.51
LITAF-217ENST00000575426 SDSP20132 328 aa18.22■□□□□ 0.51
LITAF-217ENST00000575426 INHBEP58166 350 aa18.22■□□□□ 0.51
LITAF-217ENST00000575426 PPATQ06203 517 aa18.22■□□□□ 0.51
LITAF-217ENST00000575426 MCMDC2Q4G0Z9 681 aa18.22■□□□□ 0.51
LITAF-217ENST00000575426 GIMAP6Q6P9H5 292 aa18.22■□□□□ 0.51
LITAF-217ENST00000575426 METTL16Q86W50 562 aaKnown RBP18.22■□□□□ 0.51
LITAF-217ENST00000575426 NACAP1Q9BZK3 213 aa18.22■□□□□ 0.51
LITAF-217ENST00000575426 EHD4Q9H223 541 aa18.22■□□□□ 0.51
LITAF-217ENST00000575426 DIAPH3Q9NSV4 1193 aa18.22■□□□□ 0.51
LITAF-217ENST00000575426 HSPA1AP0DMV8 641 aaKnown RBP18.21■□□□□ 0.51
LITAF-217ENST00000575426 HSPA1BP0DMV9 641 aaKnown RBP18.21■□□□□ 0.51
LITAF-217ENST00000575426 PLCD1P51178 756 aa18.21■□□□□ 0.51
LITAF-217ENST00000575426 GTF2A2P52657 109 aa18.21■□□□□ 0.51
LITAF-217ENST00000575426 WBP1LQ9NX94 342 aa18.21■□□□□ 0.51
LITAF-217ENST00000575426 GSG1L2A8MUP6 293 aa18.2■□□□□ 0.5
LITAF-217ENST00000575426 USP17L12C9JPN9 530 aa18.2■□□□□ 0.5
LITAF-217ENST00000575426 USP17L21D6R901 530 aa18.2■□□□□ 0.5
LITAF-217ENST00000575426 GJA5P36382 358 aa18.2■□□□□ 0.5
LITAF-217ENST00000575426 CAP2P40123 477 aa18.2■□□□□ 0.5
LITAF-217ENST00000575426 TM4SF4P48230 202 aa18.2■□□□□ 0.5
LITAF-217ENST00000575426 TDO2P48775 406 aa18.2■□□□□ 0.5
LITAF-217ENST00000575426 MFAP1P55081 439 aaKnown RBP18.2■□□□□ 0.5
LITAF-217ENST00000575426 NMIQ13287 307 aaPredicted RBP18.2■□□□□ 0.5
LITAF-217ENST00000575426 PPIL2Q13356 520 aa18.2■□□□□ 0.5
LITAF-217ENST00000575426 CNKSR2Q8WXI2 1034 aa18.2■□□□□ 0.5
LITAF-217ENST00000575426 ARPP21Q9UBL0 812 aaPredicted RBP18.2■□□□□ 0.5
LITAF-217ENST00000575426 PHIPQ8WWQ0 1821 aa18.19■□□□□ 0.5
LITAF-217ENST00000575426 CA12O43570 354 aa18.19■□□□□ 0.5
LITAF-217ENST00000575426 PTPRAP18433 802 aa18.19■□□□□ 0.5
LITAF-217ENST00000575426 OTUD7BQ6GQQ9 843 aa18.19■□□□□ 0.5
LITAF-217ENST00000575426 FAM227BQ96M60 508 aa18.19■□□□□ 0.5
LITAF-217ENST00000575426 GINM1Q9NU53 330 aa18.19■□□□□ 0.5
LITAF-217ENST00000575426 TAOK2Q9UL54 1235 aa18.19■□□□□ 0.5
LITAF-217ENST00000575426 A0A0D9SFI3 127 aa18.18■□□□□ 0.5
LITAF-217ENST00000575426 MINDY4BA8MYZ0 360 aa18.18■□□□□ 0.5
LITAF-217ENST00000575426 ASNSP08243 561 aa18.18■□□□□ 0.5
LITAF-217ENST00000575426 CYP2D6P10635 497 aa18.18■□□□□ 0.5
LITAF-217ENST00000575426 GSPT1P15170 499 aaKnown RBP18.18■□□□□ 0.5
LITAF-217ENST00000575426 SNAPC2Q13487 334 aa18.18■□□□□ 0.5
LITAF-217ENST00000575426 CERKLQ49MI3 558 aaPredicted RBP18.18■□□□□ 0.5
LITAF-217ENST00000575426 SBK1Q52WX2 424 aa18.18■□□□□ 0.5
LITAF-217ENST00000575426 C12orf60Q5U649 245 aa18.18■□□□□ 0.5
LITAF-217ENST00000575426 CTR9Q6PD62 1173 aa18.18■□□□□ 0.5
LITAF-217ENST00000575426 CWC27Q6UX04 472 aaKnown RBP18.18■□□□□ 0.5
LITAF-217ENST00000575426 CCDC129Q6ZRS4 1044 aa18.18■□□□□ 0.5
LITAF-217ENST00000575426 IFNL3Q8IZI9 196 aa18.18■□□□□ 0.5
LITAF-217ENST00000575426 NAPBQ9H115 298 aa18.18■□□□□ 0.5
LITAF-217ENST00000575426 CABP5Q9NP86 173 aa18.18■□□□□ 0.5
LITAF-217ENST00000575426 SWAP70Q9UH65 585 aa18.18■□□□□ 0.5
LITAF-217ENST00000575426 ZHX2Q9Y6X8 837 aa18.18■□□□□ 0.5
LITAF-217ENST00000575426 USP17L5A8MUK1 530 aa18.17■□□□□ 0.5
LITAF-217ENST00000575426 IRF6O14896 467 aa18.17■□□□□ 0.5
LITAF-217ENST00000575426 CETPP11597 493 aa18.17■□□□□ 0.5
LITAF-217ENST00000575426 TATDN1Q6P1N9 297 aa18.17■□□□□ 0.5
LITAF-217ENST00000575426 TBC1D2Q9BYX2 928 aa18.17■□□□□ 0.5
LITAF-217ENST00000575426 DNAJC18Q9H819 358 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms