RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 ATG9AQ7Z3C6 839 aa9.25□□□□□ -0.93
NUP88-205ENST00000572809 LPIN2Q92539 896 aa9.25□□□□□ -0.93
NUP88-205ENST00000572809 CLUAP1Q96AJ1 413 aa9.25□□□□□ -0.93
NUP88-205ENST00000572809 PRMT6Q96LA8 375 aaPredicted RBP9.25□□□□□ -0.93
NUP88-205ENST00000572809 SLC6A16Q9GZN6 736 aa9.25□□□□□ -0.93
NUP88-205ENST00000572809 SIL1Q9H173 461 aa9.25□□□□□ -0.93
NUP88-205ENST00000572809 CEP126Q9P2H0 1117 aa9.25□□□□□ -0.93
NUP88-205ENST00000572809 IQSEC3Q9UPP2 1182 aaPredicted RBP9.25□□□□□ -0.93
NUP88-205ENST00000572809 TNNQ9UQP3 1299 aa9.25□□□□□ -0.93
NUP88-205ENST00000572809 MYO1BO43795 1136 aa9.24□□□□□ -0.93
NUP88-205ENST00000572809 WFS1O76024 890 aa9.24□□□□□ -0.93
NUP88-205ENST00000572809 CIAO1O76071 339 aa9.24□□□□□ -0.93
NUP88-205ENST00000572809 CFHP08603 1231 aa9.24□□□□□ -0.93
NUP88-205ENST00000572809 SLC5A1P13866 664 aa9.24□□□□□ -0.93
NUP88-205ENST00000572809 NF2P35240 595 aa9.24□□□□□ -0.93
NUP88-205ENST00000572809 IL15P40933 162 aaPredicted RBP9.24□□□□□ -0.93
NUP88-205ENST00000572809 ZNF157P51786 506 aaPredicted RBP9.24□□□□□ -0.93
NUP88-205ENST00000572809 NOGQ13253 232 aa9.24□□□□□ -0.93
NUP88-205ENST00000572809 APOBEC3FQ8IUX4 373 aaKnown RBP9.24□□□□□ -0.93
NUP88-205ENST00000572809 TMEM134Q9H6X4 195 aa9.24□□□□□ -0.93
NUP88-205ENST00000572809 COPRSQ9NQ92 184 aa9.24□□□□□ -0.93
NUP88-205ENST00000572809 PKD2L1Q9P0L9 805 aa9.24□□□□□ -0.93
NUP88-205ENST00000572809 TTF2Q9UNY4 1162 aaKnown RBP9.24□□□□□ -0.93
NUP88-205ENST00000572809 PA2G4Q9UQ80 394 aaKnown RBP9.24□□□□□ -0.93
NUP88-205ENST00000572809 PCDHAC2Q9Y5I4 1007 aa9.24□□□□□ -0.93
NUP88-205ENST00000572809 ZBED9Q6R2W3 1325 aa9.24□□□□□ -0.93
NUP88-205ENST00000572809 A0A1B0GUL6 1792 aa9.23□□□□□ -0.93
NUP88-205ENST00000572809 FAM155AB1AL88 458 aaPredicted RBP9.23□□□□□ -0.93
NUP88-205ENST00000572809 SRGAP3O43295 1099 aa9.23□□□□□ -0.93
NUP88-205ENST00000572809 GNAI2P04899 355 aa9.23□□□□□ -0.93
NUP88-205ENST00000572809 LBX1P52954 281 aa9.23□□□□□ -0.93
NUP88-205ENST00000572809 CHAF1AQ13111 956 aaPredicted RBP9.23□□□□□ -0.93
NUP88-205ENST00000572809 TBC1D22AQ8WUA7 517 aa9.23□□□□□ -0.93
NUP88-205ENST00000572809 NLRP7Q8WX94 980 aa9.23□□□□□ -0.93
NUP88-205ENST00000572809 ZIC5Q96T25 663 aa9.23□□□□□ -0.93
NUP88-205ENST00000572809 DEFB129Q9H1M3 183 aa9.23□□□□□ -0.93
NUP88-205ENST00000572809 PRDM10Q9NQV6 1147 aa9.23□□□□□ -0.93
NUP88-205ENST00000572809 SERPINA10Q9UK55 444 aa9.23□□□□□ -0.93
NUP88-205ENST00000572809 ZNF646O15015 1829 aaPredicted RBP9.23□□□□□ -0.93
NUP88-205ENST00000572809 CLRN2A0PK11 232 aa9.22□□□□□ -0.93
NUP88-205ENST00000572809 RCCD1A6NED2 376 aa9.22□□□□□ -0.93
NUP88-205ENST00000572809 UBE2Q2LH0YL09 131 aa9.22□□□□□ -0.93
NUP88-205ENST00000572809 NR1I2O75469 434 aa9.22□□□□□ -0.93
NUP88-205ENST00000572809 HSPA8P11142 646 aaKnown RBP9.22□□□□□ -0.93
NUP88-205ENST00000572809 KIF23Q02241 960 aaPredicted RBP9.22□□□□□ -0.93
NUP88-205ENST00000572809 MTX1Q13505 466 aa9.22□□□□□ -0.93
NUP88-205ENST00000572809 ATP2B3Q16720 1220 aa9.22□□□□□ -0.93
NUP88-205ENST00000572809 MOB2Q70IA6 237 aa9.22□□□□□ -0.93
NUP88-205ENST00000572809 TNS4Q8IZW8 715 aa9.22□□□□□ -0.93
NUP88-205ENST00000572809 TMEM57Q8N5G2 664 aa9.22□□□□□ -0.93
NUP88-205ENST00000572809 MRIQ9BWK5 157 aa9.22□□□□□ -0.93
NUP88-205ENST00000572809 GNL3LQ9NVN8 582 aaKnown RBP9.22□□□□□ -0.93
NUP88-205ENST00000572809 POLR3EQ9NVU0 708 aa9.22□□□□□ -0.93
NUP88-205ENST00000572809 CA12O43570 354 aa9.21□□□□□ -0.94
NUP88-205ENST00000572809 CRKP46108 304 aa9.21□□□□□ -0.94
NUP88-205ENST00000572809 TIMM10P62072 90 aa9.21□□□□□ -0.94
NUP88-205ENST00000572809 HDLBPQ00341 1268 aaKnown RBP9.21□□□□□ -0.94
NUP88-205ENST00000572809 PRKG1Q13976 671 aa9.21□□□□□ -0.94
NUP88-205ENST00000572809 GRIK5Q16478 980 aa9.21□□□□□ -0.94
NUP88-205ENST00000572809 SUPT20HL1Q3ZLR7 823 aa9.21□□□□□ -0.94
NUP88-205ENST00000572809 ARMC9Q7Z3E5 817 aa9.21□□□□□ -0.94
NUP88-205ENST00000572809 HOMEZQ8IX15 550 aa9.21□□□□□ -0.94
NUP88-205ENST00000572809 DZIP1LQ8IYY4 767 aaKnown RBP9.21□□□□□ -0.94
NUP88-205ENST00000572809 WDR66Q8TBY9 1149 aa9.21□□□□□ -0.94
NUP88-205ENST00000572809 TDRD3Q9H7E2 651 aaKnown RBP9.21□□□□□ -0.94
NUP88-205ENST00000572809 VEZTQ9HBM0 779 aa9.21□□□□□ -0.94
NUP88-205ENST00000572809 GMPR2Q9P2T1 348 aaKnown RBP9.21□□□□□ -0.94
NUP88-205ENST00000572809 ZNF70Q9UC06 446 aaPredicted RBP9.21□□□□□ -0.94
NUP88-205ENST00000572809 SUGT1Q9Y2Z0 365 aa9.21□□□□□ -0.94
NUP88-205ENST00000572809 PPP2R3BQ9Y5P8 575 aa9.21□□□□□ -0.94
NUP88-205ENST00000572809 PCNTO95613 3336 aa9.21□□□□□ -0.94
NUP88-205ENST00000572809 ZBTB7BO15156 539 aaPredicted RBP9.2□□□□□ -0.94
NUP88-205ENST00000572809 SLC10A3P09131 477 aa9.2□□□□□ -0.94
NUP88-205ENST00000572809 TFCP2Q12800 502 aa9.2□□□□□ -0.94
NUP88-205ENST00000572809 RASA3Q14644 834 aa9.2□□□□□ -0.94
NUP88-205ENST00000572809 FTSJ3Q8IY81 847 aaKnown RBP9.2□□□□□ -0.94
NUP88-205ENST00000572809 CSRNP1Q96S65 589 aa9.2□□□□□ -0.94
NUP88-205ENST00000572809 ANGEL1Q9UNK9 670 aaKnown RBP9.2□□□□□ -0.94
NUP88-205ENST00000572809 AKAP2Q9Y2D5 859 aa9.2□□□□□ -0.94
NUP88-205ENST00000572809 PNMA6EA0A0J9YXQ4 647 aa9.19□□□□□ -0.94
NUP88-205ENST00000572809 PPP1R12BO60237 982 aaPredicted RBP9.19□□□□□ -0.94
NUP88-205ENST00000572809 ATP8B2P98198 1209 aa9.19□□□□□ -0.94
NUP88-205ENST00000572809 G3BP1Q13283 466 aaKnown RBP eCLIP9.19□□□□□ -0.94
NUP88-205ENST00000572809 TNFAIP1Q13829 316 aa9.19□□□□□ -0.94
NUP88-205ENST00000572809 LDLRAD1Q5T700 205 aa9.19□□□□□ -0.94
NUP88-205ENST00000572809 NBPF12Q5TAG4 269 aaPredicted RBP9.19□□□□□ -0.94
NUP88-205ENST00000572809 CCDC102BQ68D86 513 aa9.19□□□□□ -0.94
NUP88-205ENST00000572809 RASAL3Q86YV0 1011 aa9.19□□□□□ -0.94
NUP88-205ENST00000572809 ITPRIPQ8IWB1 547 aa9.19□□□□□ -0.94
NUP88-205ENST00000572809 SCUBE3Q8IX30 993 aa9.19□□□□□ -0.94
NUP88-205ENST00000572809 CRIPAKQ8N1N5 446 aa9.19□□□□□ -0.94
NUP88-205ENST00000572809 TEKT1Q969V4 418 aa9.19□□□□□ -0.94
NUP88-205ENST00000572809 NEUROD6Q96NK8 337 aa9.19□□□□□ -0.94
NUP88-205ENST00000572809 DENND2AQ9ULE3 1009 aa9.19□□□□□ -0.94
NUP88-205ENST00000572809 FZD1Q9UP38 647 aa9.19□□□□□ -0.94
NUP88-205ENST00000572809 AOX1Q06278 1338 aa9.19□□□□□ -0.94
NUP88-205ENST00000572809 A0A1B0GUL7 405 aa9.18□□□□□ -0.94
NUP88-205ENST00000572809 TCP10L2B9ZVM9 353 aa9.18□□□□□ -0.94
NUP88-205ENST00000572809 AXIN1O15169 862 aa9.18□□□□□ -0.94
NUP88-205ENST00000572809 MAST3O60307 1309 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms