RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 PDE1AP54750 535 aa16.8■□□□□ 0.28
RPAIN-211ENST00000572174 DYNLL1P63167 89 aaKnown RBP16.8■□□□□ 0.28
RPAIN-211ENST00000572174 PPIL2Q13356 520 aa16.8■□□□□ 0.28
RPAIN-211ENST00000572174 ZFPM1Q8IX07 1006 aa16.8■□□□□ 0.28
RPAIN-211ENST00000572174 SCYL3Q8IZE3 742 aa16.8■□□□□ 0.28
RPAIN-211ENST00000572174 APPBP2Q92624 585 aa16.8■□□□□ 0.28
RPAIN-211ENST00000572174 EVI5LQ96CN4 794 aa16.8■□□□□ 0.28
RPAIN-211ENST00000572174 FSD1Q9BTV5 496 aa16.8■□□□□ 0.28
RPAIN-211ENST00000572174 ATP8A2Q9NTI2 1148 aa16.8■□□□□ 0.28
RPAIN-211ENST00000572174 GINM1Q9NU53 330 aa16.8■□□□□ 0.28
RPAIN-211ENST00000572174 SNCAIPQ9Y6H5 919 aa16.8■□□□□ 0.28
RPAIN-211ENST00000572174 TSHZ3Q63HK5 1081 aa16.79■□□□□ 0.28
RPAIN-211ENST00000572174 B4GALNT3Q6L9W6 998 aa16.79■□□□□ 0.28
RPAIN-211ENST00000572174 SH3BP5LQ7L8J4 393 aa16.79■□□□□ 0.28
RPAIN-211ENST00000572174 OTUD5Q96G74 571 aa16.79■□□□□ 0.28
RPAIN-211ENST00000572174 EHD4Q9H223 541 aa16.79■□□□□ 0.28
RPAIN-211ENST00000572174 PRDM10Q9NQV6 1147 aa16.79■□□□□ 0.28
RPAIN-211ENST00000572174 FOXN1O15353 648 aa16.78■□□□□ 0.28
RPAIN-211ENST00000572174 RNF113AO15541 343 aaKnown RBP16.78■□□□□ 0.28
RPAIN-211ENST00000572174 MBD4O95243 580 aa16.78■□□□□ 0.28
RPAIN-211ENST00000572174 IGHDP01880 384 aa16.78■□□□□ 0.28
RPAIN-211ENST00000572174 CETPP11597 493 aa16.78■□□□□ 0.28
RPAIN-211ENST00000572174 GNAT2P19087 354 aa16.78■□□□□ 0.28
RPAIN-211ENST00000572174 MKRN3Q13064 507 aaKnown RBP16.78■□□□□ 0.28
RPAIN-211ENST00000572174 SNAPC2Q13487 334 aa16.78■□□□□ 0.28
RPAIN-211ENST00000572174 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.78■□□□□ 0.28
RPAIN-211ENST00000572174 SERPINB13Q9UIV8 391 aa16.78■□□□□ 0.28
RPAIN-211ENST00000572174 CASP8AP2Q9UKL3 1982 aa16.78■□□□□ 0.28
RPAIN-211ENST00000572174 PHF20L1A8MW92 1017 aa16.77■□□□□ 0.28
RPAIN-211ENST00000572174 POLR3DP05423 398 aaPredicted RBP16.77■□□□□ 0.28
RPAIN-211ENST00000572174 INPP5BP32019 993 aa16.77■□□□□ 0.28
RPAIN-211ENST00000572174 METTL16Q86W50 562 aaKnown RBP16.77■□□□□ 0.28
RPAIN-211ENST00000572174 OTUD7AQ8TE49 926 aaPredicted RBP16.77■□□□□ 0.28
RPAIN-211ENST00000572174 ZKSCAN4Q969J2 545 aaPredicted RBP16.77■□□□□ 0.28
RPAIN-211ENST00000572174 OSBPL3Q9H4L5 887 aa16.77■□□□□ 0.28
RPAIN-211ENST00000572174 ZCCHC17Q9NP64 241 aaKnown RBP16.77■□□□□ 0.28
RPAIN-211ENST00000572174 ASNSP08243 561 aa16.76■□□□□ 0.27
RPAIN-211ENST00000572174 LCORLQ8N3X6 602 aa16.76■□□□□ 0.27
RPAIN-211ENST00000572174 ZIC5Q96T25 663 aa16.76■□□□□ 0.27
RPAIN-211ENST00000572174 RNF186Q9NXI6 227 aa16.76■□□□□ 0.27
RPAIN-211ENST00000572174 PALD1Q9ULE6 856 aa16.76■□□□□ 0.27
RPAIN-211ENST00000572174 TESPA1A2RU30 521 aaPredicted RBP16.75■□□□□ 0.27
RPAIN-211ENST00000572174 HSPA8P11142 646 aaKnown RBP16.75■□□□□ 0.27
RPAIN-211ENST00000572174 NOM1Q5C9Z4 860 aaKnown RBP16.75■□□□□ 0.27
RPAIN-211ENST00000572174 GIMAP6Q6P9H5 292 aa16.75■□□□□ 0.27
RPAIN-211ENST00000572174 IFNL1Q8IU54 200 aa16.75■□□□□ 0.27
RPAIN-211ENST00000572174 CFHR5Q9BXR6 569 aa16.75■□□□□ 0.27
RPAIN-211ENST00000572174 ARMT1Q9H993 441 aa16.75■□□□□ 0.27
RPAIN-211ENST00000572174 AS3MTQ9HBK9 375 aa16.75■□□□□ 0.27
RPAIN-211ENST00000572174 DCP1AQ9NPI6 582 aaPredicted RBP16.75■□□□□ 0.27
RPAIN-211ENST00000572174 MCM9Q9NXL9 1143 aa16.75■□□□□ 0.27
RPAIN-211ENST00000572174 SAP30BPQ9UHR5 308 aaKnown RBP16.75■□□□□ 0.27
RPAIN-211ENST00000572174 LOC285556D6RIA3 1793 aa16.74■□□□□ 0.27
RPAIN-211ENST00000572174 CCL15-CCL14A0A0B4J2E2 113 aa16.74■□□□□ 0.27
RPAIN-211ENST00000572174 CXCL11O14625 94 aa16.74■□□□□ 0.27
RPAIN-211ENST00000572174 TRPA1O75762 1119 aa16.74■□□□□ 0.27
RPAIN-211ENST00000572174 PTPRAP18433 802 aa16.74■□□□□ 0.27
RPAIN-211ENST00000572174 CAP2P40123 477 aa16.74■□□□□ 0.27
RPAIN-211ENST00000572174 CCL15Q16663 113 aa16.74■□□□□ 0.27
RPAIN-211ENST00000572174 NACAP1Q9BZK3 213 aa16.74■□□□□ 0.27
RPAIN-211ENST00000572174 ARPP21Q9UBL0 812 aaPredicted RBP16.74■□□□□ 0.27
RPAIN-211ENST00000572174 SWAP70Q9UH65 585 aa16.74■□□□□ 0.27
RPAIN-211ENST00000572174 KCNH4Q9UQ05 1017 aa16.74■□□□□ 0.27
RPAIN-211ENST00000572174 SLC4A4Q9Y6R1 1079 aa16.74■□□□□ 0.27
RPAIN-211ENST00000572174 TRIM6-TRIM34B2RNG4 842 aa16.73■□□□□ 0.27
RPAIN-211ENST00000572174 HIP1O00291 1037 aa16.73■□□□□ 0.27
RPAIN-211ENST00000572174 IRF6O14896 467 aa16.73■□□□□ 0.27
RPAIN-211ENST00000572174 GJA5P36382 358 aa16.73■□□□□ 0.27
RPAIN-211ENST00000572174 LBX1P52954 281 aa16.73■□□□□ 0.27
RPAIN-211ENST00000572174 PLEKHM2Q8IWE5 1019 aa16.73■□□□□ 0.27
RPAIN-211ENST00000572174 SDR42E1Q8WUS8 393 aa16.73■□□□□ 0.27
RPAIN-211ENST00000572174 MS4A4AQ96JQ5 239 aa16.73■□□□□ 0.27
RPAIN-211ENST00000572174 PUS7LQ9H0K6 701 aaKnown RBP16.73■□□□□ 0.27
RPAIN-211ENST00000572174 GPAA1O43292 621 aa16.72■□□□□ 0.27
RPAIN-211ENST00000572174 MFAP1P55081 439 aaKnown RBP16.72■□□□□ 0.27
RPAIN-211ENST00000572174 FASTKD5Q7L8L6 764 aaKnown RBP16.72■□□□□ 0.27
RPAIN-211ENST00000572174 USP17L5A8MUK1 530 aa16.71■□□□□ 0.27
RPAIN-211ENST00000572174 ZMYM1Q5SVZ6 1142 aa16.71■□□□□ 0.27
RPAIN-211ENST00000572174 CENPQQ7L2Z9 268 aaPredicted RBP16.71■□□□□ 0.27
RPAIN-211ENST00000572174 STRBPQ96SI9 672 aaKnown RBP16.71■□□□□ 0.27
RPAIN-211ENST00000572174 ZNF287Q9HBT7 754 aa16.71■□□□□ 0.27
RPAIN-211ENST00000572174 CABP5Q9NP86 173 aa16.71■□□□□ 0.27
RPAIN-211ENST00000572174 HELLSQ9NRZ9 838 aa16.71■□□□□ 0.27
RPAIN-211ENST00000572174 ZHX2Q9Y6X8 837 aa16.71■□□□□ 0.27
RPAIN-211ENST00000572174 FAM196BA6NMK8 535 aa16.7■□□□□ 0.26
RPAIN-211ENST00000572174 TATDN1Q6P1N9 297 aa16.7■□□□□ 0.26
RPAIN-211ENST00000572174 CNKSR2Q8WXI2 1034 aa16.7■□□□□ 0.26
RPAIN-211ENST00000572174 OSBP2Q969R2 916 aa16.7■□□□□ 0.26
RPAIN-211ENST00000572174 RILPL2Q969X0 211 aa16.7■□□□□ 0.26
RPAIN-211ENST00000572174 ZFYVE28Q9HCC9 887 aa16.7■□□□□ 0.26
RPAIN-211ENST00000572174 IGF2BP3O00425 579 aaKnown RBP eCLIP16.69■□□□□ 0.26
RPAIN-211ENST00000572174 APPP05067 770 aa16.69■□□□□ 0.26
RPAIN-211ENST00000572174 TDO2P48775 406 aa16.69■□□□□ 0.26
RPAIN-211ENST00000572174 TAF1CQ15572 869 aaPredicted RBP16.69■□□□□ 0.26
RPAIN-211ENST00000572174 CERKLQ49MI3 558 aaPredicted RBP16.69■□□□□ 0.26
RPAIN-211ENST00000572174 ANKRD23Q86SG2 305 aa16.69■□□□□ 0.26
RPAIN-211ENST00000572174 ZNF280CQ8ND82 737 aa16.69■□□□□ 0.26
RPAIN-211ENST00000572174 BRI3BPQ8WY22 251 aa16.69■□□□□ 0.26
RPAIN-211ENST00000572174 CCDC17Q96LX7 622 aa16.69■□□□□ 0.26
RPAIN-211ENST00000572174 DNAJC18Q9H819 358 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms