RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 COL2A1P02458 1487 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC1-203ENST00000571739 SPDYE5A6NIY4 337 aa10.47□□□□□ -0.73
TRAPPC1-203ENST00000571739 GSG1L2A8MUP6 293 aa10.47□□□□□ -0.73
TRAPPC1-203ENST00000571739 IRF6O14896 467 aa10.47□□□□□ -0.73
TRAPPC1-203ENST00000571739 CTNND1O60716 968 aaKnown RBP10.47□□□□□ -0.73
TRAPPC1-203ENST00000571739 ZBTB48P10074 688 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC1-203ENST00000571739 CYP2D6P10635 497 aa10.47□□□□□ -0.73
TRAPPC1-203ENST00000571739 NOL9Q5SY16 702 aaKnown RBP10.47□□□□□ -0.73
TRAPPC1-203ENST00000571739 SKAP1Q86WV1 359 aa10.47□□□□□ -0.73
TRAPPC1-203ENST00000571739 RILPL2Q969X0 211 aa10.47□□□□□ -0.73
TRAPPC1-203ENST00000571739 AIDAQ96BJ3 306 aa10.47□□□□□ -0.73
TRAPPC1-203ENST00000571739 MS4A4AQ96JQ5 239 aa10.47□□□□□ -0.73
TRAPPC1-203ENST00000571739 MCM9Q9NXL9 1143 aa10.47□□□□□ -0.73
TRAPPC1-203ENST00000571739 CSADQ9Y600 493 aa10.47□□□□□ -0.73
TRAPPC1-203ENST00000571739 SLC4A4Q9Y6R1 1079 aa10.47□□□□□ -0.73
TRAPPC1-203ENST00000571739 CYP2D7A0A087X1C5 515 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 TESPA1A2RU30 521 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 TRIM6-TRIM34B2RNG4 842 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 PATL2C9JE40 543 aaKnown RBP10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 USP17L12C9JPN9 530 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 USP17L21D6R901 530 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 FOXN1O15353 648 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 GPAA1O43292 621 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 GSPT1P15170 499 aaKnown RBP10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 PTPRAP18433 802 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 SDSP20132 328 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 CAP2P40123 477 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 GABPAQ06546 454 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 SHROOM1Q2M3G4 852 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 TATDN1Q6P1N9 297 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 CTR9Q6PD62 1173 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 CCDC129Q6ZRS4 1044 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 CENPQQ7L2Z9 268 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 TTC6Q86TZ1 520 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 ERO1BQ86YB8 467 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 SCYL3Q8IZE3 742 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 OTUD5Q96G74 571 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 FAM227BQ96M60 508 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 PTPN18Q99952 460 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 ATP8A2Q9NTI2 1148 aa10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 HERC5Q9UII4 1024 aaKnown RBP10.46□□□□□ -0.73
TRAPPC1-203ENST00000571739 FOCADQ5VW36 1801 aa10.46□□□□□ -0.74
TRAPPC1-203ENST00000571739 CEP350Q5VT06 3117 aa10.46□□□□□ -0.74
TRAPPC1-203ENST00000571739 MYH7P12883 1935 aa10.45□□□□□ -0.74
TRAPPC1-203ENST00000571739 SIPA1L1O43166 1804 aa10.45□□□□□ -0.74
TRAPPC1-203ENST00000571739 FOXP2O15409 715 aa10.45□□□□□ -0.74
TRAPPC1-203ENST00000571739 POLR3DP05423 398 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC1-203ENST00000571739 PPATQ06203 517 aa10.45□□□□□ -0.74
TRAPPC1-203ENST00000571739 LRRFIP1Q32MZ4 808 aaKnown RBP10.45□□□□□ -0.74
TRAPPC1-203ENST00000571739 TTC22Q5TAA0 569 aa10.45□□□□□ -0.74
TRAPPC1-203ENST00000571739 C12orf60Q5U649 245 aa10.45□□□□□ -0.74
TRAPPC1-203ENST00000571739 CCDC84Q86UT8 332 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC1-203ENST00000571739 TICAM2Q86XR7 235 aa10.45□□□□□ -0.74
TRAPPC1-203ENST00000571739 REM2Q8IYK8 340 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC1-203ENST00000571739 CCDC136Q96JN2 1154 aa10.45□□□□□ -0.74
TRAPPC1-203ENST00000571739 EHD4Q9H223 541 aa10.45□□□□□ -0.74
TRAPPC1-203ENST00000571739 EPB41L4AQ9HCS5 686 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC1-203ENST00000571739 RNF186Q9NXI6 227 aa10.45□□□□□ -0.74
TRAPPC1-203ENST00000571739 AFG3L2Q9Y4W6 797 aa10.45□□□□□ -0.74
TRAPPC1-203ENST00000571739 MYH1P12882 1939 aa10.45□□□□□ -0.74
TRAPPC1-203ENST00000571739 A0A0D9SFI3 127 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 MANSC4A6NHS7 340 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 IGF2BP3O00425 579 aaKnown RBP eCLIP10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 TRPA1O75762 1119 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 HLA-DOAP06340 250 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 NEFLP07196 543 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 SHMT1P34896 483 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 INHBEP58166 350 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 NMIQ13287 307 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 IFNL1Q8IU54 200 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 IFNL3Q8IZI9 196 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 BRI3BPQ8WY22 251 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 DYNLL2Q96FJ2 89 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 R3HDMLQ9H3Y0 253 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 HELLSQ9NRZ9 838 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 SERPINB13Q9UIV8 391 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 TSKSQ9UJT2 592 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 KCNH4Q9UQ05 1017 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 ZHX2Q9Y6X8 837 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 OTOFQ9HC10 1997 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 THSD7BQ9C0I4 1608 aa10.44□□□□□ -0.74
TRAPPC1-203ENST00000571739 GDF11O95390 407 aa10.43□□□□□ -0.74
TRAPPC1-203ENST00000571739 GNAT2P19087 354 aa10.43□□□□□ -0.74
TRAPPC1-203ENST00000571739 PPIL2Q13356 520 aa10.43□□□□□ -0.74
TRAPPC1-203ENST00000571739 MOGSQ13724 837 aa10.43□□□□□ -0.74
TRAPPC1-203ENST00000571739 MCMDC2Q4G0Z9 681 aa10.43□□□□□ -0.74
TRAPPC1-203ENST00000571739 SBK1Q52WX2 424 aa10.43□□□□□ -0.74
TRAPPC1-203ENST00000571739 VPS53Q5VIR6 699 aa10.43□□□□□ -0.74
TRAPPC1-203ENST00000571739 GIMAP6Q6P9H5 292 aa10.43□□□□□ -0.74
TRAPPC1-203ENST00000571739 ZNF589Q86UQ0 364 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC1-203ENST00000571739 CRACR2BQ8N4Y2 399 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC1-203ENST00000571739 SLC44A5Q8NCS7 719 aa10.43□□□□□ -0.74
TRAPPC1-203ENST00000571739 CCL15-CCL14A0A0B4J2E2 113 aa10.42□□□□□ -0.74
TRAPPC1-203ENST00000571739 CXCL11O14625 94 aa10.42□□□□□ -0.74
TRAPPC1-203ENST00000571739 TBC1D8O95759 1140 aa10.42□□□□□ -0.74
TRAPPC1-203ENST00000571739 APPP05067 770 aa10.42□□□□□ -0.74
TRAPPC1-203ENST00000571739 HSPA8P11142 646 aaKnown RBP10.42□□□□□ -0.74
TRAPPC1-203ENST00000571739 GUCY1A2P33402 732 aa10.42□□□□□ -0.74
TRAPPC1-203ENST00000571739 GTF2A2P52657 109 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms