RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 FASTKD5Q7L8L6 764 aaKnown RBP20.87■□□□□ 0.93
MAP1LC3B-208ENST00000570189 AACSQ86V21 672 aa20.87■□□□□ 0.93
MAP1LC3B-208ENST00000570189 SH3RF3Q8TEJ3 882 aaPredicted RBP20.87■□□□□ 0.93
MAP1LC3B-208ENST00000570189 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.87■□□□□ 0.93
MAP1LC3B-208ENST00000570189 ARMC5Q96C12 935 aa20.87■□□□□ 0.93
MAP1LC3B-208ENST00000570189 AATFQ9NY61 560 aaKnown RBP eCLIP20.87■□□□□ 0.93
MAP1LC3B-208ENST00000570189 ZSWIM8A7E2V4 1837 aa20.87■□□□□ 0.93
MAP1LC3B-208ENST00000570189 PDHXO00330 501 aa20.86■□□□□ 0.93
MAP1LC3B-208ENST00000570189 RAB11FIP3O75154 756 aa20.86■□□□□ 0.93
MAP1LC3B-208ENST00000570189 SOX10P56693 466 aa20.86■□□□□ 0.93
MAP1LC3B-208ENST00000570189 LACTBP83111 547 aaPredicted RBP20.86■□□□□ 0.93
MAP1LC3B-208ENST00000570189 PI4KBQ9UBF8 816 aa20.86■□□□□ 0.93
MAP1LC3B-208ENST00000570189 FLT1P17948 1338 aa20.85■□□□□ 0.93
MAP1LC3B-208ENST00000570189 DDX60LQ5H9U9 1706 aaKnown RBP20.85■□□□□ 0.93
MAP1LC3B-208ENST00000570189 CLASRPQ8N2M8 674 aaKnown RBP20.85■□□□□ 0.93
MAP1LC3B-208ENST00000570189 PARK7Q99497 189 aaKnown RBP20.85■□□□□ 0.93
MAP1LC3B-208ENST00000570189 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.85■□□□□ 0.93
MAP1LC3B-208ENST00000570189 PDE4DIPQ5VU43 2346 aa20.85■□□□□ 0.93
MAP1LC3B-208ENST00000570189 PRMT2P55345 433 aa20.84■□□□□ 0.93
MAP1LC3B-208ENST00000570189 SLURP2P0DP57 97 aa20.83■□□□□ 0.93
MAP1LC3B-208ENST00000570189 CAP2P40123 477 aa20.83■□□□□ 0.93
MAP1LC3B-208ENST00000570189 KIF22Q14807 665 aa20.83■□□□□ 0.93
MAP1LC3B-208ENST00000570189 TTF1Q15361 905 aaPredicted RBP20.83■□□□□ 0.93
MAP1LC3B-208ENST00000570189 GINM1Q9NU53 330 aa20.83■□□□□ 0.93
MAP1LC3B-208ENST00000570189 KIAA0100Q14667 2235 aaKnown RBP20.82■□□□□ 0.92
MAP1LC3B-208ENST00000570189 MYH7P12883 1935 aa20.82■□□□□ 0.92
MAP1LC3B-208ENST00000570189 BCRP11274 1271 aa20.82■□□□□ 0.92
MAP1LC3B-208ENST00000570189 MAP3K12Q12852 859 aa20.82■□□□□ 0.92
MAP1LC3B-208ENST00000570189 FOXP4Q8IVH2 680 aaPredicted RBP20.82■□□□□ 0.92
MAP1LC3B-208ENST00000570189 PROCA1Q8NCQ7 364 aaPredicted RBP20.82■□□□□ 0.92
MAP1LC3B-208ENST00000570189 TGFBRAP1Q8WUH2 860 aa20.82■□□□□ 0.92
MAP1LC3B-208ENST00000570189 IL1RAPL2Q9NP60 686 aa20.82■□□□□ 0.92
MAP1LC3B-208ENST00000570189 IDH1O75874 414 aaKnown RBP20.81■□□□□ 0.92
MAP1LC3B-208ENST00000570189 CYP7A1P22680 504 aa20.81■□□□□ 0.92
MAP1LC3B-208ENST00000570189 BRCA2P51587 3418 aa20.8■□□□□ 0.92
MAP1LC3B-208ENST00000570189 C20orf194Q5TEA3 1177 aa20.8■□□□□ 0.92
MAP1LC3B-208ENST00000570189 MAGEB6Q8N7X4 407 aa20.8■□□□□ 0.92
MAP1LC3B-208ENST00000570189 ANTXR1Q9H6X2 564 aa20.8■□□□□ 0.92
MAP1LC3B-208ENST00000570189 DNAJC18Q9H819 358 aa20.8■□□□□ 0.92
MAP1LC3B-208ENST00000570189 AGTPBP1Q9UPW5 1226 aa20.8■□□□□ 0.92
MAP1LC3B-208ENST00000570189 NAV1Q8NEY1 1877 aa20.79■□□□□ 0.92
MAP1LC3B-208ENST00000570189 FAM196BA6NMK8 535 aa20.79■□□□□ 0.92
MAP1LC3B-208ENST00000570189 RRP1BQ14684 758 aaKnown RBP20.79■□□□□ 0.92
MAP1LC3B-208ENST00000570189 SH3D19Q5HYK7 790 aa20.79■□□□□ 0.92
MAP1LC3B-208ENST00000570189 MAPKAPK5Q8IW41 473 aa20.79■□□□□ 0.92
MAP1LC3B-208ENST00000570189 ZNF280CQ8ND82 737 aa20.79■□□□□ 0.92
MAP1LC3B-208ENST00000570189 ZNF333Q96JL9 665 aa20.79■□□□□ 0.92
MAP1LC3B-208ENST00000570189 WDR18Q9BV38 432 aa20.79■□□□□ 0.92
MAP1LC3B-208ENST00000570189 ARHGAP39Q9C0H5 1083 aa20.79■□□□□ 0.92
MAP1LC3B-208ENST00000570189 CPA4Q9UI42 421 aa20.79■□□□□ 0.92
MAP1LC3B-208ENST00000570189 PTCH2Q9Y6C5 1203 aa20.79■□□□□ 0.92
MAP1LC3B-208ENST00000570189 NDUFB9Q9Y6M9 179 aa20.79■□□□□ 0.92
MAP1LC3B-208ENST00000570189 TRIM75PA6NK02 468 aa20.78■□□□□ 0.92
MAP1LC3B-208ENST00000570189 USP17L5A8MUK1 530 aa20.78■□□□□ 0.92
MAP1LC3B-208ENST00000570189 ASNSP08243 561 aa20.78■□□□□ 0.92
MAP1LC3B-208ENST00000570189 IFIT2P09913 472 aaKnown RBP20.78■□□□□ 0.92
MAP1LC3B-208ENST00000570189 DYNLL1P63167 89 aaKnown RBP20.78■□□□□ 0.92
MAP1LC3B-208ENST00000570189 NBPF11Q86T75 865 aa20.78■□□□□ 0.92
MAP1LC3B-208ENST00000570189 RIOK1Q9BRS2 568 aaKnown RBP20.78■□□□□ 0.92
MAP1LC3B-208ENST00000570189 EHD4Q9H223 541 aa20.78■□□□□ 0.92
MAP1LC3B-208ENST00000570189 HLA-DOAP06340 250 aa20.77■□□□□ 0.92
MAP1LC3B-208ENST00000570189 CTGFP29279 349 aa20.77■□□□□ 0.92
MAP1LC3B-208ENST00000570189 TRIM47Q96LD4 638 aa20.77■□□□□ 0.92
MAP1LC3B-208ENST00000570189 AS3MTQ9HBK9 375 aa20.77■□□□□ 0.92
MAP1LC3B-208ENST00000570189 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.77■□□□□ 0.92
MAP1LC3B-208ENST00000570189 PALD1Q9ULE6 856 aa20.77■□□□□ 0.92
MAP1LC3B-208ENST00000570189 CYP2C8P10632 490 aa20.76■□□□□ 0.91
MAP1LC3B-208ENST00000570189 ATP5JP18859 108 aa20.76■□□□□ 0.91
MAP1LC3B-208ENST00000570189 SLC9C1Q4G0N8 1177 aa20.76■□□□□ 0.91
MAP1LC3B-208ENST00000570189 GADL1Q6ZQY3 521 aa20.76■□□□□ 0.91
MAP1LC3B-208ENST00000570189 MIGA1Q8NAN2 632 aa20.76■□□□□ 0.91
MAP1LC3B-208ENST00000570189 SRRDQ9UH36 339 aa20.76■□□□□ 0.91
MAP1LC3B-208ENST00000570189 PNMA3Q9UL41 463 aa20.76■□□□□ 0.91
MAP1LC3B-208ENST00000570189 MKI67P46013 3256 aaKnown RBP20.76■□□□□ 0.91
MAP1LC3B-208ENST00000570189 PDE6AP16499 860 aa20.75■□□□□ 0.91
MAP1LC3B-208ENST00000570189 HOXD10P28358 340 aa20.75■□□□□ 0.91
MAP1LC3B-208ENST00000570189 PSMC4P43686 418 aa20.75■□□□□ 0.91
MAP1LC3B-208ENST00000570189 SPP2Q13103 211 aa20.75■□□□□ 0.91
MAP1LC3B-208ENST00000570189 CCDC84Q86UT8 332 aaPredicted RBP20.75■□□□□ 0.91
MAP1LC3B-208ENST00000570189 TAOK2Q9UL54 1235 aa20.75■□□□□ 0.91
MAP1LC3B-208ENST00000570189 TCRBV5S4A2TA0A5A2 114 aa20.74■□□□□ 0.91
MAP1LC3B-208ENST00000570189 PABPC4Q13310 644 aaKnown RBP eCLIP20.74■□□□□ 0.91
MAP1LC3B-208ENST00000570189 SLC9C2Q5TAH2 1124 aa20.74■□□□□ 0.91
MAP1LC3B-208ENST00000570189 TATDN1Q6P1N9 297 aa20.74■□□□□ 0.91
MAP1LC3B-208ENST00000570189 DOCK3Q8IZD9 2030 aa20.74■□□□□ 0.91
MAP1LC3B-208ENST00000570189 CRACR2BQ8N4Y2 399 aaPredicted RBP20.74■□□□□ 0.91
MAP1LC3B-208ENST00000570189 LRRCC1Q9C099 1032 aa20.74■□□□□ 0.91
MAP1LC3B-208ENST00000570189 OSBPP22059 807 aa20.73■□□□□ 0.91
MAP1LC3B-208ENST00000570189 USP5P45974 858 aa20.73■□□□□ 0.91
MAP1LC3B-208ENST00000570189 FCGRTP55899 365 aa20.73■□□□□ 0.91
MAP1LC3B-208ENST00000570189 BACE1P56817 501 aa20.73■□□□□ 0.91
MAP1LC3B-208ENST00000570189 FAM110CQ1W6H9 321 aa20.73■□□□□ 0.91
MAP1LC3B-208ENST00000570189 TREML2Q5T2D2 321 aa20.73■□□□□ 0.91
MAP1LC3B-208ENST00000570189 TRIM34Q9BYJ4 488 aa20.73■□□□□ 0.91
MAP1LC3B-208ENST00000570189 SERPINB13Q9UIV8 391 aa20.73■□□□□ 0.91
MAP1LC3B-208ENST00000570189 MAGEB6P1A0A0J9YX57 407 aa20.72■□□□□ 0.91
MAP1LC3B-208ENST00000570189 POTEFA5A3E0 1075 aa20.72■□□□□ 0.91
MAP1LC3B-208ENST00000570189 C19orf81C9J6K1 198 aa20.72■□□□□ 0.91
MAP1LC3B-208ENST00000570189 APBB1O00213 710 aa20.72■□□□□ 0.91
MAP1LC3B-208ENST00000570189 GOLIM4O00461 696 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms