RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 RPAP1Q9BWH6 1393 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-212ENST00000570129 TTC41PQ6P2S7 1318 aa11.86□□□□□ -0.51
GTF3C1-212ENST00000570129 SPDYE5A6NIY4 337 aa11.86□□□□□ -0.51
GTF3C1-212ENST00000570129 GLRX3O76003 335 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-212ENST00000570129 ECM2O94769 699 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-212ENST00000570129 MAPK8IP2Q13387 824 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-212ENST00000570129 AAMPQ13685 434 aa11.86□□□□□ -0.51
GTF3C1-212ENST00000570129 UBE3CQ15386 1083 aa11.86□□□□□ -0.51
GTF3C1-212ENST00000570129 DCAF15Q66K64 600 aa11.86□□□□□ -0.51
GTF3C1-212ENST00000570129 FAM43AQ8N2R8 423 aa11.86□□□□□ -0.51
GTF3C1-212ENST00000570129 FAM227BQ96M60 508 aa11.86□□□□□ -0.51
GTF3C1-212ENST00000570129 DCP1AQ9NPI6 582 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-212ENST00000570129 INCENPQ9NQS7 918 aa11.86□□□□□ -0.51
GTF3C1-212ENST00000570129 CSADQ9Y600 493 aa11.86□□□□□ -0.51
GTF3C1-212ENST00000570129 TACC3Q9Y6A5 838 aa11.86□□□□□ -0.51
GTF3C1-212ENST00000570129 ZHX2Q9Y6X8 837 aa11.86□□□□□ -0.51
GTF3C1-212ENST00000570129 OTOFQ9HC10 1997 aa11.86□□□□□ -0.51
GTF3C1-212ENST00000570129 GSG1L2A8MUP6 293 aa11.85□□□□□ -0.51
GTF3C1-212ENST00000570129 PLCG2P16885 1265 aa11.85□□□□□ -0.51
GTF3C1-212ENST00000570129 PTPRAP18433 802 aa11.85□□□□□ -0.51
GTF3C1-212ENST00000570129 CTCFP49711 727 aaPredicted RBP11.85□□□□□ -0.51
GTF3C1-212ENST00000570129 VPS53Q5VIR6 699 aa11.85□□□□□ -0.51
GTF3C1-212ENST00000570129 IFNL1Q8IU54 200 aa11.85□□□□□ -0.51
GTF3C1-212ENST00000570129 AIDAQ96BJ3 306 aa11.85□□□□□ -0.51
GTF3C1-212ENST00000570129 GPATCH3Q96I76 525 aa11.85□□□□□ -0.51
GTF3C1-212ENST00000570129 FSD1Q9BTV5 496 aa11.85□□□□□ -0.51
GTF3C1-212ENST00000570129 EPB41L4AQ9HCS5 686 aaPredicted RBP11.85□□□□□ -0.51
GTF3C1-212ENST00000570129 MCM9Q9NXL9 1143 aa11.85□□□□□ -0.51
GTF3C1-212ENST00000570129 PI4KBQ9UBF8 816 aa11.85□□□□□ -0.51
GTF3C1-212ENST00000570129 SLC4A4Q9Y6R1 1079 aa11.85□□□□□ -0.51
GTF3C1-212ENST00000570129 DOCK2Q92608 1830 aa11.85□□□□□ -0.51
GTF3C1-212ENST00000570129 SIPA1L1O43166 1804 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 CCL15-CCL14A0A0B4J2E2 113 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 A0A0D9SFI3 127 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 BTBD19C9JJ37 291 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 USP17L12C9JPN9 530 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 USP17L21D6R901 530 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 TBC1D12O60347 775 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 PEX10O60683 326 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 GUCY1A2P33402 732 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 SHMT1P34896 483 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 CAP2P40123 477 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 CCL15Q16663 113 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 ZMYM1Q5SVZ6 1142 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 NOL9Q5SY16 702 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 GPAT2Q6NUI2 795 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 CTR9Q6PD62 1173 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 METTL16Q86W50 562 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 ERO1BQ86YB8 467 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 CLEC10AQ8IUN9 316 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 SCYL3Q8IZE3 742 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 NKX2-3Q8TAU0 364 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 CRNKL1Q9BZJ0 848 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 IL25Q9H293 177 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 AFG3L2Q9Y4W6 797 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 THSD7BQ9C0I4 1608 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 AK9Q5TCS8 1911 aa11.84□□□□□ -0.51
GTF3C1-212ENST00000570129 TESPA1A2RU30 521 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-212ENST00000570129 TRIM75PA6NK02 468 aa11.83□□□□□ -0.52
GTF3C1-212ENST00000570129 ERC2O15083 957 aa11.83□□□□□ -0.52
GTF3C1-212ENST00000570129 GPAA1O43292 621 aa11.83□□□□□ -0.52
GTF3C1-212ENST00000570129 CTNND1O60716 968 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-212ENST00000570129 POLR3DP05423 398 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-212ENST00000570129 GSPT1P15170 499 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-212ENST00000570129 GABPAQ06546 454 aa11.83□□□□□ -0.52
GTF3C1-212ENST00000570129 NMIQ13287 307 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-212ENST00000570129 PPIL2Q13356 520 aa11.83□□□□□ -0.52
GTF3C1-212ENST00000570129 ZNF589Q86UQ0 364 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-212ENST00000570129 APPBP2Q92624 585 aa11.83□□□□□ -0.52
GTF3C1-212ENST00000570129 RILPL2Q969X0 211 aa11.83□□□□□ -0.52
GTF3C1-212ENST00000570129 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.83□□□□□ -0.522e-12■■■□□ 15
GTF3C1-212ENST00000570129 ZBTB47Q9UFB7 747 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-212ENST00000570129 MAST2Q6P0Q8 1798 aa11.82□□□□□ -0.52
GTF3C1-212ENST00000570129 MANSC4A6NHS7 340 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-212ENST00000570129 TRIM6-TRIM34B2RNG4 842 aa11.82□□□□□ -0.52
GTF3C1-212ENST00000570129 GH2P01242 217 aa11.82□□□□□ -0.52
GTF3C1-212ENST00000570129 ZBTB48P10074 688 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-212ENST00000570129 SPP2Q13103 211 aa11.82□□□□□ -0.52
GTF3C1-212ENST00000570129 CRHR2Q13324 411 aa11.82□□□□□ -0.52
GTF3C1-212ENST00000570129 SIAH1Q8IUQ4 282 aa11.82□□□□□ -0.52
GTF3C1-212ENST00000570129 FOXP4Q8IVH2 680 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-212ENST00000570129 CRACR2BQ8N4Y2 399 aaPredicted RBP11.82□□□□□ -0.52
GTF3C1-212ENST00000570129 ACER1Q8TDN7 264 aa11.82□□□□□ -0.52
GTF3C1-212ENST00000570129 CDK5RAP2Q96SN8 1893 aa11.82□□□□□ -0.52
GTF3C1-212ENST00000570129 PPATQ06203 517 aa11.81□□□□□ -0.52
GTF3C1-212ENST00000570129 KIAA1755Q5JYT7 1200 aa11.81□□□□□ -0.52
GTF3C1-212ENST00000570129 TREML2Q5T2D2 321 aa11.81□□□□□ -0.52
GTF3C1-212ENST00000570129 C12orf60Q5U649 245 aa11.81□□□□□ -0.52
GTF3C1-212ENST00000570129 TATDN1Q6P1N9 297 aa11.81□□□□□ -0.52
GTF3C1-212ENST00000570129 ZNF296Q8WUU4 475 aaPredicted RBP11.81□□□□□ -0.52
GTF3C1-212ENST00000570129 HOOK2Q96ED9 719 aa11.81□□□□□ -0.52
GTF3C1-212ENST00000570129 BEGAINQ9BUH8 593 aa11.81□□□□□ -0.52
GTF3C1-212ENST00000570129 DHX36Q9H2U1 1008 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-212ENST00000570129 OSBPL3Q9H4L5 887 aa11.81□□□□□ -0.52
GTF3C1-212ENST00000570129 PICK1Q9NRD5 415 aa11.81□□□□□ -0.52
GTF3C1-212ENST00000570129 KCNH4Q9UQ05 1017 aa11.81□□□□□ -0.52
GTF3C1-212ENST00000570129 UNCXA6NJT0 531 aa11.8□□□□□ -0.52
GTF3C1-212ENST00000570129 MINDY4BA8MYZ0 360 aa11.8□□□□□ -0.52
GTF3C1-212ENST00000570129 CYP2C8P10632 490 aa11.8□□□□□ -0.52
GTF3C1-212ENST00000570129 AKR1B1P15121 316 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms