RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 CRACR2BQ8N4Y2 399 aaPredicted RBP19.99■□□□□ 0.79
COMMD4-224ENST00000568877 ZNF341Q9BYN7 854 aa19.99■□□□□ 0.79
COMMD4-224ENST00000568877 EHD4Q9H223 541 aa19.99■□□□□ 0.79
COMMD4-224ENST00000568877 HERC5Q9UII4 1024 aaKnown RBP19.99■□□□□ 0.79
COMMD4-224ENST00000568877 SERPINB13Q9UIV8 391 aa19.99■□□□□ 0.79
COMMD4-224ENST00000568877 ANGEL1Q9UNK9 670 aaKnown RBP19.99■□□□□ 0.79
COMMD4-224ENST00000568877 CYP2D7A0A087X1C5 515 aa19.98■□□□□ 0.79
COMMD4-224ENST00000568877 MINDY4BA8MYZ0 360 aa19.98■□□□□ 0.79
COMMD4-224ENST00000568877 TRIM34Q9BYJ4 488 aa19.98■□□□□ 0.79
COMMD4-224ENST00000568877 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.98■□□□□ 0.79
COMMD4-224ENST00000568877 FAM196BA6NMK8 535 aa19.97■□□□□ 0.79
COMMD4-224ENST00000568877 IREB2P48200 963 aaKnown RBP19.97■□□□□ 0.79
COMMD4-224ENST00000568877 EVX2Q03828 476 aa19.97■□□□□ 0.79
COMMD4-224ENST00000568877 MAP3K11Q16584 847 aa19.97■□□□□ 0.79
COMMD4-224ENST00000568877 KIAA1211Q6ZU35 1233 aa19.97■□□□□ 0.79
COMMD4-224ENST00000568877 KLRG1Q96E93 195 aa19.97■□□□□ 0.79
COMMD4-224ENST00000568877 MYH1P12882 1939 aa19.97■□□□□ 0.79
COMMD4-224ENST00000568877 ZMYM6O95789 1325 aa19.97■□□□□ 0.79
COMMD4-224ENST00000568877 TRPM7Q96QT4 1865 aa19.96■□□□□ 0.79
COMMD4-224ENST00000568877 UBE2Q2LH0YL09 131 aa19.96■□□□□ 0.79
COMMD4-224ENST00000568877 SMIM22K7EJ46 135 aa19.96■□□□□ 0.79
COMMD4-224ENST00000568877 PTH1RQ03431 593 aa19.96■□□□□ 0.79
COMMD4-224ENST00000568877 GABPAQ06546 454 aa19.96■□□□□ 0.79
COMMD4-224ENST00000568877 DNAJC18Q9H819 358 aa19.96■□□□□ 0.79
COMMD4-224ENST00000568877 ZNF112Q9UJU3 913 aa19.96■□□□□ 0.79
COMMD4-224ENST00000568877 TAOK2Q9UL54 1235 aa19.96■□□□□ 0.79
COMMD4-224ENST00000568877 PAPPA2Q9BXP8 1791 aa19.95■□□□□ 0.78
COMMD4-224ENST00000568877 PHF20L1A8MW92 1017 aa19.95■□□□□ 0.78
COMMD4-224ENST00000568877 LDLRAD1Q5T700 205 aa19.95■□□□□ 0.78
COMMD4-224ENST00000568877 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.95■□□□□ 0.78
COMMD4-224ENST00000568877 DYNLL2Q96FJ2 89 aa19.95■□□□□ 0.78
COMMD4-224ENST00000568877 WRNIP1Q96S55 665 aa19.95■□□□□ 0.78
COMMD4-224ENST00000568877 LSG1Q9H089 658 aaKnown RBP19.95■□□□□ 0.78
COMMD4-224ENST00000568877 ANO2Q9NQ90 1003 aa19.95■□□□□ 0.78
COMMD4-224ENST00000568877 CREBZFQ9NS37 354 aa19.95■□□□□ 0.78
COMMD4-224ENST00000568877 CTNNA3Q9UI47 895 aa19.95■□□□□ 0.78
COMMD4-224ENST00000568877 TLL2Q9Y6L7 1015 aa19.95■□□□□ 0.78
COMMD4-224ENST00000568877 BAZ2AQ9UIF9 1905 aaKnown RBP19.94■□□□□ 0.78
COMMD4-224ENST00000568877 UNCXA6NJT0 531 aa19.94■□□□□ 0.78
COMMD4-224ENST00000568877 HUNKP57058 714 aa19.94■□□□□ 0.78
COMMD4-224ENST00000568877 MAP3K9P80192 1104 aa19.94■□□□□ 0.78
COMMD4-224ENST00000568877 PPARAQ07869 468 aa19.94■□□□□ 0.78
COMMD4-224ENST00000568877 SAPCD2Q86UD0 394 aa19.94■□□□□ 0.78
COMMD4-224ENST00000568877 MAP4K1Q92918 833 aa19.94■□□□□ 0.78
COMMD4-224ENST00000568877 SWAP70Q9UH65 585 aa19.94■□□□□ 0.78
COMMD4-224ENST00000568877 ANAPC4Q9UJX5 808 aa19.94■□□□□ 0.78
COMMD4-224ENST00000568877 ABT1Q9ULW3 272 aaKnown RBP19.94■□□□□ 0.78
COMMD4-224ENST00000568877 SIPA1L1O43166 1804 aa19.94■□□□□ 0.78
COMMD4-224ENST00000568877 SHMT1P34896 483 aa19.93■□□□□ 0.78
COMMD4-224ENST00000568877 TATDN1Q6P1N9 297 aa19.93■□□□□ 0.78
COMMD4-224ENST00000568877 C16orf86Q6ZW13 317 aa19.93■□□□□ 0.78
COMMD4-224ENST00000568877 ANKRD13AQ8IZ07 590 aa19.93■□□□□ 0.78
COMMD4-224ENST00000568877 U3KPZ7 1027 aaPredicted RBP19.93■□□□□ 0.78
COMMD4-224ENST00000568877 ROBO3Q96MS0 1386 aa19.93■□□□□ 0.78
COMMD4-224ENST00000568877 ZNF213O14771 459 aa19.92■□□□□ 0.78
COMMD4-224ENST00000568877 SLC3A2P08195 630 aaKnown RBP19.92■□□□□ 0.78
COMMD4-224ENST00000568877 HSPA6P17066 643 aa19.92■□□□□ 0.78
COMMD4-224ENST00000568877 INPP5BP32019 993 aa19.92■□□□□ 0.78
COMMD4-224ENST00000568877 CDK8P49336 464 aa19.92■□□□□ 0.78
COMMD4-224ENST00000568877 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.92■□□□□ 0.78
COMMD4-224ENST00000568877 STK11IPQ8N1F8 1099 aa19.92■□□□□ 0.78
COMMD4-224ENST00000568877 SLC44A5Q8NCS7 719 aa19.92■□□□□ 0.78
COMMD4-224ENST00000568877 ZKSCAN4Q969J2 545 aaPredicted RBP19.92■□□□□ 0.78
COMMD4-224ENST00000568877 CTNND1O60716 968 aaKnown RBP19.91■□□□□ 0.78
COMMD4-224ENST00000568877 HAND2P61296 217 aa19.91■□□□□ 0.78
COMMD4-224ENST00000568877 CTDSPL2Q05D32 466 aa19.91■□□□□ 0.78
COMMD4-224ENST00000568877 VGLL4Q14135 290 aa19.91■□□□□ 0.78
COMMD4-224ENST00000568877 RRP1BQ14684 758 aaKnown RBP19.91■□□□□ 0.78
COMMD4-224ENST00000568877 IMMTQ16891 758 aaKnown RBP19.91■□□□□ 0.78
COMMD4-224ENST00000568877 RBM8AQ9Y5S9 174 aaKnown RBP19.91■□□□□ 0.78
COMMD4-224ENST00000568877 CSADQ9Y600 493 aa19.91■□□□□ 0.78
COMMD4-224ENST00000568877 REC8O95072 547 aa19.9■□□□□ 0.78
COMMD4-224ENST00000568877 CERKLQ49MI3 558 aaPredicted RBP19.9■□□□□ 0.78
COMMD4-224ENST00000568877 HHIPL1Q96JK4 782 aa19.9■□□□□ 0.78
COMMD4-224ENST00000568877 CLMNQ96JQ2 1002 aa19.9■□□□□ 0.78
COMMD4-224ENST00000568877 MKNK2Q9HBH9 465 aa19.9■□□□□ 0.78
COMMD4-224ENST00000568877 ZNF287Q9HBT7 754 aa19.9■□□□□ 0.78
COMMD4-224ENST00000568877 CAP2P40123 477 aa19.89■□□□□ 0.77
COMMD4-224ENST00000568877 PDE4BQ07343 736 aa19.89■□□□□ 0.77
COMMD4-224ENST00000568877 NOL9Q5SY16 702 aaKnown RBP19.89■□□□□ 0.77
COMMD4-224ENST00000568877 RGMBQ6NW40 437 aa19.89■□□□□ 0.77
COMMD4-224ENST00000568877 SCYL3Q8IZE3 742 aa19.89■□□□□ 0.77
COMMD4-224ENST00000568877 SLC10A4Q96EP9 437 aa19.89■□□□□ 0.77
COMMD4-224ENST00000568877 SNCAIPQ9Y6H5 919 aa19.89■□□□□ 0.77
COMMD4-224ENST00000568877 LAMB1P07942 1786 aa19.88■□□□□ 0.77
COMMD4-224ENST00000568877 RASSF10A6NK89 507 aa19.88■□□□□ 0.77
COMMD4-224ENST00000568877 GDF11O95390 407 aa19.88■□□□□ 0.77
COMMD4-224ENST00000568877 HTRA3P83110 453 aa19.88■□□□□ 0.77
COMMD4-224ENST00000568877 NBPF3Q9H094 633 aa19.88■□□□□ 0.77
COMMD4-224ENST00000568877 ELP3Q9H9T3 547 aa19.88■□□□□ 0.77
COMMD4-224ENST00000568877 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.88■□□□□ 0.77
COMMD4-224ENST00000568877 PRDM1O75626 825 aa19.87■□□□□ 0.77
COMMD4-224ENST00000568877 CYP21A2P08686 494 aa19.87■□□□□ 0.77
COMMD4-224ENST00000568877 FGRP09769 529 aa19.87■□□□□ 0.77
COMMD4-224ENST00000568877 ZNF157P51786 506 aaPredicted RBP19.87■□□□□ 0.77
COMMD4-224ENST00000568877 JAG1P78504 1218 aa19.87■□□□□ 0.77
COMMD4-224ENST00000568877 ABCB5Q2M3G0 1257 aa19.87■□□□□ 0.77
COMMD4-224ENST00000568877 DEFB115Q30KQ5 88 aa19.87■□□□□ 0.77
COMMD4-224ENST00000568877 C8orf34Q49A92 452 aa19.87■□□□□ 0.77
COMMD4-224ENST00000568877 AKNAD1Q5T1N1 836 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms