RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 E9PSI1 815 aa18.44■□□□□ 0.54
USB1-214ENST00000568848 DLL1O00548 723 aa18.44■□□□□ 0.54
USB1-214ENST00000568848 CTNND1O60716 968 aaKnown RBP18.44■□□□□ 0.54
USB1-214ENST00000568848 MNX1P50219 401 aaPredicted RBP18.44■□□□□ 0.54
USB1-214ENST00000568848 IRF5Q13568 498 aa18.44■□□□□ 0.54
USB1-214ENST00000568848 CRISPLD2Q9H0B8 497 aa18.44■□□□□ 0.54
USB1-214ENST00000568848 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.44■□□□□ 0.54
USB1-214ENST00000568848 HMG20BQ9P0W2 317 aa18.44■□□□□ 0.54
USB1-214ENST00000568848 SEMA3EO15041 775 aa18.43■□□□□ 0.54
USB1-214ENST00000568848 COPRSQ9NQ92 184 aa18.43■□□□□ 0.54
USB1-214ENST00000568848 GPR75-ASB3A0A0A6YYF3 556 aa18.42■□□□□ 0.54
USB1-214ENST00000568848 ERICH6Q7L0X2 663 aa18.42■□□□□ 0.54
USB1-214ENST00000568848 PXYLP1Q8TE99 480 aa18.42■□□□□ 0.54
USB1-214ENST00000568848 TRIB2Q92519 343 aa18.42■□□□□ 0.54
USB1-214ENST00000568848 COA7Q96BR5 231 aa18.42■□□□□ 0.54
USB1-214ENST00000568848 NEUROD6Q96NK8 337 aa18.42■□□□□ 0.54
USB1-214ENST00000568848 ASCC2Q9H1I8 757 aaPredicted RBP18.42■□□□□ 0.54
USB1-214ENST00000568848 SLC45A1Q9Y2W3 748 aa18.42■□□□□ 0.54
USB1-214ENST00000568848 CYP2B6P20813 491 aa18.41■□□□□ 0.54
USB1-214ENST00000568848 FAM110CQ1W6H9 321 aa18.41■□□□□ 0.54
USB1-214ENST00000568848 SH3RF3Q8TEJ3 882 aaPredicted RBP18.41■□□□□ 0.54
USB1-214ENST00000568848 SNRKQ9NRH2 765 aa18.41■□□□□ 0.54
USB1-214ENST00000568848 GJD2Q9UKL4 321 aa18.41■□□□□ 0.54
USB1-214ENST00000568848 ALDH1L2Q3SY69 923 aa18.4■□□□□ 0.54
USB1-214ENST00000568848 ZGPATQ8N5A5 531 aaKnown RBP18.4■□□□□ 0.54
USB1-214ENST00000568848 ZNF280CQ8ND82 737 aa18.4■□□□□ 0.54
USB1-214ENST00000568848 NSUN4Q96CB9 384 aaKnown RBP18.4■□□□□ 0.54
USB1-214ENST00000568848 FAM163AQ96GL9 167 aaPredicted RBP18.4■□□□□ 0.54
USB1-214ENST00000568848 OSBPL5Q9H0X9 879 aaPredicted RBP18.4■□□□□ 0.54
USB1-214ENST00000568848 TXNRD2Q9NNW7 524 aa18.4■□□□□ 0.54
USB1-214ENST00000568848 RAI14Q9P0K7 980 aa18.4■□□□□ 0.54
USB1-214ENST00000568848 MYO5AQ9Y4I1 1855 aaKnown RBP18.39■□□□□ 0.54
USB1-214ENST00000568848 SRGAP3O43295 1099 aa18.39■□□□□ 0.53
USB1-214ENST00000568848 MTMR2Q13614 643 aa18.39■□□□□ 0.53
USB1-214ENST00000568848 NECAB2Q7Z6G3 386 aa18.39■□□□□ 0.53
USB1-214ENST00000568848 GDF15Q99988 308 aa18.39■□□□□ 0.53
USB1-214ENST00000568848 DNAJC18Q9H819 358 aa18.39■□□□□ 0.53
USB1-214ENST00000568848 FBXO3Q9UK99 471 aa18.39■□□□□ 0.53
USB1-214ENST00000568848 GDF11O95390 407 aa18.38■□□□□ 0.53
USB1-214ENST00000568848 HMGCRP04035 888 aa18.38■□□□□ 0.53
USB1-214ENST00000568848 CAP2P40123 477 aa18.38■□□□□ 0.53
USB1-214ENST00000568848 MCAMP43121 646 aa18.38■□□□□ 0.53
USB1-214ENST00000568848 POTEEQ6S8J3 1075 aa18.38■□□□□ 0.53
USB1-214ENST00000568848 ADGRA1Q86SQ6 560 aa18.38■□□□□ 0.53
USB1-214ENST00000568848 TEX11Q8IYF3 940 aa18.38■□□□□ 0.53
USB1-214ENST00000568848 SPATA5Q8NB90 893 aa18.38■□□□□ 0.53
USB1-214ENST00000568848 CDK5RAP2Q96SN8 1893 aa18.37■□□□□ 0.53
USB1-214ENST00000568848 UNC80Q8N2C7 3258 aa18.37■□□□□ 0.53
USB1-214ENST00000568848 MAGEA10P43363 369 aaPredicted RBP18.37■□□□□ 0.53
USB1-214ENST00000568848 CCL14Q16627 93 aa18.37■□□□□ 0.53
USB1-214ENST00000568848 SPTY2D1Q68D10 685 aaPredicted RBP18.37■□□□□ 0.53
USB1-214ENST00000568848 MAPKAPK5Q8IW41 473 aa18.37■□□□□ 0.53
USB1-214ENST00000568848 P2RX7Q99572 595 aaKnown RBP18.37■□□□□ 0.53
USB1-214ENST00000568848 AATFQ9NY61 560 aaKnown RBP eCLIP18.37■□□□□ 0.53
USB1-214ENST00000568848 PNMA3Q9UL41 463 aa18.37■□□□□ 0.53
USB1-214ENST00000568848 NDUFB9Q9Y6M9 179 aa18.37■□□□□ 0.53
USB1-214ENST00000568848 PFASO15067 1338 aa18.37■□□□□ 0.53
USB1-214ENST00000568848 TBC1D12O60347 775 aa18.36■□□□□ 0.53
USB1-214ENST00000568848 PRKAR2AP13861 404 aaKnown RBP18.36■□□□□ 0.53
USB1-214ENST00000568848 MVPQ14764 893 aaKnown RBP18.36■□□□□ 0.53
USB1-214ENST00000568848 PDS5AQ29RF7 1337 aaKnown RBP18.36■□□□□ 0.53
USB1-214ENST00000568848 PROCA1Q8NCQ7 364 aaPredicted RBP18.36■□□□□ 0.53
USB1-214ENST00000568848 SAP30BPQ9UHR5 308 aaKnown RBP18.36■□□□□ 0.53
USB1-214ENST00000568848 PNMA6EA0A0J9YXQ4 647 aa18.35■□□□□ 0.53
USB1-214ENST00000568848 USP17L5A8MUK1 530 aa18.35■□□□□ 0.53
USB1-214ENST00000568848 CCND3P30281 292 aaPredicted RBP18.35■□□□□ 0.53
USB1-214ENST00000568848 Q3C1V9 767 aa18.35■□□□□ 0.53
USB1-214ENST00000568848 SLF2Q8IX21 1173 aa18.35■□□□□ 0.53
USB1-214ENST00000568848 PORCNQ9H237 461 aa18.35■□□□□ 0.53
USB1-214ENST00000568848 C11orf49Q9H6J7 331 aa18.35■□□□□ 0.53
USB1-214ENST00000568848 HMX1Q9NP08 348 aaPredicted RBP18.35■□□□□ 0.53
USB1-214ENST00000568848 LAMA2P24043 3122 aaKnown RBP18.35■□□□□ 0.53
USB1-214ENST00000568848 RPTORQ8N122 1335 aa18.34■□□□□ 0.53
USB1-214ENST00000568848 GORABQ5T7V8 394 aa18.34■□□□□ 0.53
USB1-214ENST00000568848 TRMT2AQ8IZ69 625 aaKnown RBP18.34■□□□□ 0.53
USB1-214ENST00000568848 DEFB123Q8N688 67 aa18.34■□□□□ 0.53
USB1-214ENST00000568848 PAGR1Q9BTK6 254 aa18.34■□□□□ 0.53
USB1-214ENST00000568848 API5Q9BZZ5 524 aaKnown RBP18.34■□□□□ 0.53
USB1-214ENST00000568848 GCLCP48506 637 aaPredicted RBP18.33■□□□□ 0.52
USB1-214ENST00000568848 DYNLL1P63167 89 aaKnown RBP18.33■□□□□ 0.52
USB1-214ENST00000568848 IRX3P78415 501 aaPredicted RBP18.33■□□□□ 0.52
USB1-214ENST00000568848 ZYXQ15942 572 aaKnown RBP18.33■□□□□ 0.52
USB1-214ENST00000568848 TGFBRAP1Q8WUH2 860 aa18.33■□□□□ 0.52
USB1-214ENST00000568848 NBPF3Q9H094 633 aa18.33■□□□□ 0.52
USB1-214ENST00000568848 LRP2BPQ9P2M1 347 aa18.33■□□□□ 0.52
USB1-214ENST00000568848 PALD1Q9ULE6 856 aa18.33■□□□□ 0.52
USB1-214ENST00000568848 DNAH12Q6ZR08 3092 aa18.33■□□□□ 0.52
USB1-214ENST00000568848 A0A1W2PPC1 479 aa18.32■□□□□ 0.52
USB1-214ENST00000568848 ARID4AP29374 1257 aaPredicted RBP18.32■□□□□ 0.52
USB1-214ENST00000568848 HERVK_113P62684 666 aa18.32■□□□□ 0.52
USB1-214ENST00000568848 MDM2Q00987 491 aaPredicted RBP18.32■□□□□ 0.52
USB1-214ENST00000568848 CACNB2Q08289 660 aaPredicted RBP18.32■□□□□ 0.52
USB1-214ENST00000568848 SH3D19Q5HYK7 790 aa18.32■□□□□ 0.52
USB1-214ENST00000568848 RBPJLQ9UBG7 517 aa18.32■□□□□ 0.52
USB1-214ENST00000568848 MORF4L1Q9UBU8 362 aa18.32■□□□□ 0.52
USB1-214ENST00000568848 AKAP2Q9Y2D5 859 aa18.32■□□□□ 0.52
USB1-214ENST00000568848 MAST2Q6P0Q8 1798 aa18.32■□□□□ 0.52
USB1-214ENST00000568848 FLT1P17948 1338 aa18.31■□□□□ 0.52
USB1-214ENST00000568848 RARSP54136 660 aaKnown RBP18.31■□□□□ 0.52
USB1-214ENST00000568848 BACE1P56817 501 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms