RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.1□□□□□ -0.47
PKM-221ENST00000568743 CREBZFQ9NS37 354 aa12.1□□□□□ -0.47
PKM-221ENST00000568743 TLL2Q9Y6L7 1015 aa12.1□□□□□ -0.47
PKM-221ENST00000568743 DDX60LQ5H9U9 1706 aaKnown RBP12.1□□□□□ -0.47
PKM-221ENST00000568743 PAPPA2Q9BXP8 1791 aa12.1□□□□□ -0.47
PKM-221ENST00000568743 RAD50Q92878 1312 aa12.1□□□□□ -0.47
PKM-221ENST00000568743 TRPM7Q96QT4 1865 aa12.09□□□□□ -0.47
PKM-221ENST00000568743 MINDY4BA8MYZ0 360 aa12.09□□□□□ -0.47
PKM-221ENST00000568743 SGSM2O43147 1006 aa12.09□□□□□ -0.47
PKM-221ENST00000568743 INPP5BP32019 993 aa12.09□□□□□ -0.47
PKM-221ENST00000568743 MFAP1P55081 439 aaKnown RBP12.09□□□□□ -0.47
PKM-221ENST00000568743 C12orf60Q5U649 245 aa12.09□□□□□ -0.47
PKM-221ENST00000568743 GIMAP6Q6P9H5 292 aa12.09□□□□□ -0.47
PKM-221ENST00000568743 PAXIP1Q6ZW49 1069 aaPredicted RBP12.09□□□□□ -0.47
PKM-221ENST00000568743 TTC6Q86TZ1 520 aa12.09□□□□□ -0.47
PKM-221ENST00000568743 SAPCD2Q86UD0 394 aa12.09□□□□□ -0.47
PKM-221ENST00000568743 AMOTL1Q8IY63 956 aa12.09□□□□□ -0.47
PKM-221ENST00000568743 SLC44A5Q8NCS7 719 aa12.09□□□□□ -0.47
PKM-221ENST00000568743 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.09□□□□□ -0.47
PKM-221ENST00000568743 KLRG1Q96E93 195 aa12.09□□□□□ -0.47
PKM-221ENST00000568743 ESYT1Q9BSJ8 1104 aa12.09□□□□□ -0.47
PKM-221ENST00000568743 TRIM34Q9BYJ4 488 aa12.09□□□□□ -0.47
PKM-221ENST00000568743 SERPINB13Q9UIV8 391 aa12.09□□□□□ -0.47
PKM-221ENST00000568743 PHF20L1A8MW92 1017 aa12.08□□□□□ -0.48
PKM-221ENST00000568743 FKBP1BP68106 108 aa12.08□□□□□ -0.48
PKM-221ENST00000568743 PTH1RQ03431 593 aa12.08□□□□□ -0.48
PKM-221ENST00000568743 GRM1Q13255 1194 aa12.08□□□□□ -0.48
PKM-221ENST00000568743 RRP1BQ14684 758 aaKnown RBP12.08□□□□□ -0.48
PKM-221ENST00000568743 MAP3K11Q16584 847 aa12.08□□□□□ -0.48
PKM-221ENST00000568743 SHROOM1Q2M3G4 852 aaPredicted RBP12.08□□□□□ -0.48
PKM-221ENST00000568743 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.08□□□□□ -0.48
PKM-221ENST00000568743 ZKSCAN4Q969J2 545 aaPredicted RBP12.08□□□□□ -0.48
PKM-221ENST00000568743 ARPP21Q9UBL0 812 aaPredicted RBP12.08□□□□□ -0.48
PKM-221ENST00000568743 HERC5Q9UII4 1024 aaKnown RBP12.08□□□□□ -0.48
PKM-221ENST00000568743 SIPA1L1O43166 1804 aa12.08□□□□□ -0.48
PKM-221ENST00000568743 TBC1D12O60347 775 aa12.07□□□□□ -0.48
PKM-221ENST00000568743 FGAP02671 866 aa12.07□□□□□ -0.48
PKM-221ENST00000568743 HAND2P61296 217 aa12.07□□□□□ -0.48
PKM-221ENST00000568743 MAP3K9P80192 1104 aa12.07□□□□□ -0.48
PKM-221ENST00000568743 MAP3K10Q02779 954 aa12.07□□□□□ -0.48
PKM-221ENST00000568743 CTDSPL2Q05D32 466 aa12.07□□□□□ -0.48
PKM-221ENST00000568743 VGLL4Q14135 290 aa12.07□□□□□ -0.48
PKM-221ENST00000568743 ALX1Q15699 326 aa12.07□□□□□ -0.48
PKM-221ENST00000568743 SBK1Q52WX2 424 aa12.07□□□□□ -0.48
PKM-221ENST00000568743 LDLRAD1Q5T700 205 aa12.07□□□□□ -0.48
PKM-221ENST00000568743 CASC1Q6TDU7 716 aa12.07□□□□□ -0.48
PKM-221ENST00000568743 METTL16Q86W50 562 aaKnown RBP12.07□□□□□ -0.48
PKM-221ENST00000568743 FOXP4Q8IVH2 680 aaPredicted RBP12.07□□□□□ -0.48
PKM-221ENST00000568743 EHD4Q9H223 541 aa12.07□□□□□ -0.48
PKM-221ENST00000568743 ELP3Q9H9T3 547 aa12.07□□□□□ -0.48
PKM-221ENST00000568743 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.07□□□□□ -0.48
PKM-221ENST00000568743 ZNF112Q9UJU3 913 aa12.07□□□□□ -0.48
PKM-221ENST00000568743 MYH1P12882 1939 aa12.07□□□□□ -0.48
PKM-221ENST00000568743 BAZ2AQ9UIF9 1905 aaKnown RBP12.07□□□□□ -0.48
PKM-221ENST00000568743 GDF11O95390 407 aa12.06□□□□□ -0.48
PKM-221ENST00000568743 SHMT1P34896 483 aa12.06□□□□□ -0.48
PKM-221ENST00000568743 CDK8P49336 464 aa12.06□□□□□ -0.48
PKM-221ENST00000568743 ZNF157P51786 506 aaPredicted RBP12.06□□□□□ -0.48
PKM-221ENST00000568743 JAG1P78504 1218 aa12.06□□□□□ -0.48
PKM-221ENST00000568743 GABPAQ06546 454 aa12.06□□□□□ -0.48
PKM-221ENST00000568743 PPARAQ07869 468 aa12.06□□□□□ -0.48
PKM-221ENST00000568743 MKRN3Q13064 507 aaKnown RBP12.06□□□□□ -0.48
PKM-221ENST00000568743 CYP4F22Q6NT55 531 aa12.06□□□□□ -0.48
PKM-221ENST00000568743 RGMBQ6NW40 437 aa12.06□□□□□ -0.48
PKM-221ENST00000568743 C16orf86Q6ZW13 317 aa12.06□□□□□ -0.48
PKM-221ENST00000568743 CCDC84Q86UT8 332 aaPredicted RBP12.06□□□□□ -0.48
PKM-221ENST00000568743 ANKRD13AQ8IZ07 590 aa12.06□□□□□ -0.48
PKM-221ENST00000568743 CNKSR2Q8WXI2 1034 aa12.06□□□□□ -0.48
PKM-221ENST00000568743 DSCC1Q9BVC3 393 aa12.06□□□□□ -0.48
PKM-221ENST00000568743 ANO2Q9NQ90 1003 aa12.06□□□□□ -0.48
PKM-221ENST00000568743 CSADQ9Y600 493 aa12.06□□□□□ -0.48
PKM-221ENST00000568743 SNCAIPQ9Y6H5 919 aa12.06□□□□□ -0.48
PKM-221ENST00000568743 RASSF10A6NK89 507 aa12.05□□□□□ -0.48
PKM-221ENST00000568743 PRDM1O75626 825 aa12.05□□□□□ -0.48
PKM-221ENST00000568743 DEFB115Q30KQ5 88 aa12.05□□□□□ -0.48
PKM-221ENST00000568743 KIAA1211Q6ZU35 1233 aa12.05□□□□□ -0.48
PKM-221ENST00000568743 SCYL3Q8IZE3 742 aa12.05□□□□□ -0.48
PKM-221ENST00000568743 SLC10A4Q96EP9 437 aa12.05□□□□□ -0.48
PKM-221ENST00000568743 LSG1Q9H089 658 aaKnown RBP12.05□□□□□ -0.48
PKM-221ENST00000568743 INCENPQ9NQS7 918 aa12.05□□□□□ -0.48
PKM-221ENST00000568743 TACC3Q9Y6A5 838 aa12.05□□□□□ -0.48
PKM-221ENST00000568743 ROBO3Q96MS0 1386 aa12.05□□□□□ -0.48
PKM-221ENST00000568743 CTNND1O60716 968 aaKnown RBP12.04□□□□□ -0.48
PKM-221ENST00000568743 GJA5P36382 358 aa12.04□□□□□ -0.48
PKM-221ENST00000568743 CAP2P40123 477 aa12.04□□□□□ -0.48
PKM-221ENST00000568743 CERKLQ49MI3 558 aaPredicted RBP12.04□□□□□ -0.48
PKM-221ENST00000568743 NOL9Q5SY16 702 aaKnown RBP12.04□□□□□ -0.48
PKM-221ENST00000568743 TATDN1Q6P1N9 297 aa12.04□□□□□ -0.48
PKM-221ENST00000568743 RASAL3Q86YV0 1011 aa12.04□□□□□ -0.48
PKM-221ENST00000568743 TBC1D10CQ8IV04 446 aa12.04□□□□□ -0.48
PKM-221ENST00000568743 CAPNS2Q96L46 248 aa12.04□□□□□ -0.48
PKM-221ENST00000568743 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
PKM-221ENST00000568743 OTOFQ9HC10 1997 aa12.04□□□□□ -0.48
PKM-221ENST00000568743 ZMYM6O95789 1325 aa12.04□□□□□ -0.48
PKM-221ENST00000568743 MPHOSPH10O00566 681 aaKnown RBP12.03□□□□□ -0.48
PKM-221ENST00000568743 AOC2O75106 756 aa12.03□□□□□ -0.48
PKM-221ENST00000568743 GH2P01242 217 aa12.03□□□□□ -0.48
PKM-221ENST00000568743 SLC10A3P09131 477 aa12.03□□□□□ -0.48
PKM-221ENST00000568743 AKR1B1P15121 316 aa12.03□□□□□ -0.48
PKM-221ENST00000568743 PTPRAP18433 802 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms