RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 ESR2Q92731 530 aa11.15□□□□□ -0.62
TCF4-240ENST00000568673 CELF1Q92879 486 aaKnown RBP11.15□□□□□ -0.62
TCF4-240ENST00000568673 UBAC1Q9BSL1 405 aa11.15□□□□□ -0.62
TCF4-240ENST00000568673 NYXQ9GZU5 481 aa11.15□□□□□ -0.62
TCF4-240ENST00000568673 BCL2L12Q9HB09 334 aa11.15□□□□□ -0.62
TCF4-240ENST00000568673 MROH7-TTC4A0A0A0MT08 1334 aa11.15□□□□□ -0.62
TCF4-240ENST00000568673 SEMA3EO15041 775 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 NLRP12P59046 1061 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 DPCR1Q3MIW9 517 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 CCDC144BQ3MJ40 725 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 SHC4Q6S5L8 630 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 FBXO33Q7Z6M2 555 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 ZNF654Q8IZM8 581 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 NLRP3Q96P20 1036 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 NARFQ9UHQ1 456 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 COL1A1P02452 1464 aaPredicted RBP11.14□□□□□ -0.63
TCF4-240ENST00000568673 BTBD18B2RXH4 712 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 CUTAO60888 179 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 RPS8P62241 208 aaKnown RBP11.14□□□□□ -0.63
TCF4-240ENST00000568673 SEC23AQ15436 765 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 VPS72Q15906 364 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 RESP18Q5W5W9 173 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 CACTINQ8WUQ7 758 aaKnown RBP11.14□□□□□ -0.63
TCF4-240ENST00000568673 SETDB2Q96T68 719 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 BRIP1Q9BX63 1249 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 FOXP1Q9H334 677 aaPredicted RBP11.14□□□□□ -0.63
TCF4-240ENST00000568673 TAF1P21675 1872 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 ECM29Q5VYK3 1845 aa11.14□□□□□ -0.63
TCF4-240ENST00000568673 NEMFO60524 1076 aa11.13□□□□□ -0.63
TCF4-240ENST00000568673 TOM1O60784 492 aa11.13□□□□□ -0.63
TCF4-240ENST00000568673 RPS6KA4O75676 772 aa11.13□□□□□ -0.63
TCF4-240ENST00000568673 PIP4K2BP78356 416 aa11.13□□□□□ -0.63
TCF4-240ENST00000568673 LRRC8AQ8IWT6 810 aa11.13□□□□□ -0.63
TCF4-240ENST00000568673 DIS3L2Q8IYB7 885 aaKnown RBP11.13□□□□□ -0.63
TCF4-240ENST00000568673 ZNF384Q8TF68 577 aa11.13□□□□□ -0.63
TCF4-240ENST00000568673 FBXW7Q969H0 707 aa11.13□□□□□ -0.63
TCF4-240ENST00000568673 CACNA1SQ13698 1873 aa11.13□□□□□ -0.63
TCF4-240ENST00000568673 A0A1B0GUL6 1792 aa11.13□□□□□ -0.63
TCF4-240ENST00000568673 FGRP09769 529 aa11.13□□□□□ -0.63
TCF4-240ENST00000568673 PCP11498 1178 aaKnown RBP11.13□□□□□ -0.63
TCF4-240ENST00000568673 RILPL1Q5EBL4 403 aa11.13□□□□□ -0.63
TCF4-240ENST00000568673 CCDC82Q8N4S0 544 aa11.13□□□□□ -0.63
TCF4-240ENST00000568673 NUP133Q8WUM0 1156 aa11.13□□□□□ -0.63
TCF4-240ENST00000568673 TUBE1Q9UJT0 475 aa11.13□□□□□ -0.63
TCF4-240ENST00000568673 KCNJ14Q9UNX9 436 aa11.13□□□□□ -0.63
TCF4-240ENST00000568673 TNKSO95271 1327 aa11.13□□□□□ -0.63
TCF4-240ENST00000568673 SMTNL1A8MU46 457 aa11.12□□□□□ -0.63
TCF4-240ENST00000568673 BIN1O00499 593 aa11.12□□□□□ -0.63
TCF4-240ENST00000568673 GTF2F1P35269 517 aaKnown RBP eCLIP11.12□□□□□ -0.63
TCF4-240ENST00000568673 TOB1P50616 345 aaPredicted RBP11.12□□□□□ -0.63
TCF4-240ENST00000568673 DYNLL1P63167 89 aaKnown RBP11.12□□□□□ -0.63
TCF4-240ENST00000568673 SMIM5Q71RC9 77 aa11.12□□□□□ -0.63
TCF4-240ENST00000568673 PTF1AQ7RTS3 328 aa11.12□□□□□ -0.63
TCF4-240ENST00000568673 CMTR1Q8N1G2 835 aaKnown RBP11.12□□□□□ -0.63
TCF4-240ENST00000568673 NSUN4Q96CB9 384 aaKnown RBP11.12□□□□□ -0.63
TCF4-240ENST00000568673 NGLY1Q96IV0 654 aa11.12□□□□□ -0.63
TCF4-240ENST00000568673 CLIC6Q96NY7 704 aa11.12□□□□□ -0.63
TCF4-240ENST00000568673 ZSCAN10Q96SZ4 725 aaPredicted RBP11.12□□□□□ -0.63
TCF4-240ENST00000568673 RNF26Q9BY78 433 aaPredicted RBP11.12□□□□□ -0.63
TCF4-240ENST00000568673 ANKRD2Q9GZV1 360 aa11.12□□□□□ -0.63
TCF4-240ENST00000568673 PDS5AQ29RF7 1337 aaKnown RBP11.12□□□□□ -0.63
TCF4-240ENST00000568673 SMIM22K7EJ46 135 aa11.12□□□□□ -0.63
TCF4-240ENST00000568673 ZPR1O75312 459 aa11.12□□□□□ -0.63
TCF4-240ENST00000568673 HIBADHP31937 336 aaKnown RBP11.12□□□□□ -0.63
TCF4-240ENST00000568673 TPTE2Q6XPS3 522 aa11.12□□□□□ -0.63
TCF4-240ENST00000568673 NBPF5PQ86XG9 351 aaPredicted RBP11.12□□□□□ -0.63
TCF4-240ENST00000568673 ENAHQ8N8S7 591 aaPredicted RBP11.12□□□□□ -0.63
TCF4-240ENST00000568673 KRI1Q8N9T8 703 aaKnown RBP11.12□□□□□ -0.63
TCF4-240ENST00000568673 KCNH3Q9ULD8 1083 aa11.12□□□□□ -0.63
TCF4-240ENST00000568673 TPM4P67936 248 aa11.11□□□□□ -0.63
TCF4-240ENST00000568673 CHAF1AQ13111 956 aaPredicted RBP11.11□□□□□ -0.63
TCF4-240ENST00000568673 CTR9Q6PD62 1173 aa11.11□□□□□ -0.63
TCF4-240ENST00000568673 IQCA1Q86XH1 822 aa11.11□□□□□ -0.63
TCF4-240ENST00000568673 ELOA2Q8IYF1 753 aaPredicted RBP11.11□□□□□ -0.63
TCF4-240ENST00000568673 C8orf37Q96NL8 207 aa11.11□□□□□ -0.63
TCF4-240ENST00000568673 SRP68Q9UHB9 627 aaKnown RBP11.11□□□□□ -0.63
TCF4-240ENST00000568673 IKBKBO14920 756 aa11.11□□□□□ -0.63
TCF4-240ENST00000568673 KLRK1P26718 216 aa11.11□□□□□ -0.63
TCF4-240ENST00000568673 MECOMQ03112 1051 aa11.11□□□□□ -0.63
TCF4-240ENST00000568673 NCAPHQ15003 741 aa11.11□□□□□ -0.63
TCF4-240ENST00000568673 LONRF3Q496Y0 759 aa11.11□□□□□ -0.63
TCF4-240ENST00000568673 IFIT1BQ5T764 474 aaKnown RBP11.11□□□□□ -0.63
TCF4-240ENST00000568673 TMED8Q6PL24 325 aaPredicted RBP11.11□□□□□ -0.63
TCF4-240ENST00000568673 PDCL3Q9H2J4 239 aa11.11□□□□□ -0.63
TCF4-240ENST00000568673 FAM13BQ9NYF5 915 aa11.11□□□□□ -0.63
TCF4-240ENST00000568673 SCN7AQ01118 1682 aa11.11□□□□□ -0.63
TCF4-240ENST00000568673 CASZ1Q86V15 1759 aa11.11□□□□□ -0.63
TCF4-240ENST00000568673 CYP2D7A0A087X1C5 515 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 USP17L12C9JPN9 530 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 USP17L21D6R901 530 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 GNPATO15228 680 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 XBP1P17861 261 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 PTPREP23469 700 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 RBM10P98175 930 aaKnown RBP11.1□□□□□ -0.63
TCF4-240ENST00000568673 AKAP17AQ02040 695 aaKnown RBP11.1□□□□□ -0.63
TCF4-240ENST00000568673 NR5A1Q13285 461 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 KRBA2Q6ZNG9 492 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 FILIP1Q7Z7B0 1213 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 CATIPQ7Z7H3 387 aa11.1□□□□□ -0.63
TCF4-240ENST00000568673 CNNM3Q8NE01 707 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms