RNA–Protein interactions for RNA: ENST00000567910.1

ABCA3-205, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-205ENST00000567910 SLC4A8Q2Y0W8 1093 aa12.83□□□□□ -0.36
ABCA3-205ENST00000567910 METTL16Q86W50 562 aaKnown RBP12.83□□□□□ -0.36
ABCA3-205ENST00000567910 ANKRD13AQ8IZ07 590 aa12.83□□□□□ -0.36
ABCA3-205ENST00000567910 SDR42E1Q8WUS8 393 aa12.83□□□□□ -0.36
ABCA3-205ENST00000567910 CCDC102AQ96A19 550 aa12.83□□□□□ -0.36
ABCA3-205ENST00000567910 WNK4Q96J92 1243 aa12.83□□□□□ -0.36
ABCA3-205ENST00000567910 SEC62Q99442 399 aaKnown RBP12.83□□□□□ -0.36
ABCA3-205ENST00000567910 ELP3Q9H9T3 547 aa12.83□□□□□ -0.36
ABCA3-205ENST00000567910 SAP30BPQ9UHR5 308 aaKnown RBP12.83□□□□□ -0.36
ABCA3-205ENST00000567910 FOXP2O15409 715 aa12.82□□□□□ -0.36
ABCA3-205ENST00000567910 RNF113AO15541 343 aaKnown RBP12.82□□□□□ -0.36
ABCA3-205ENST00000567910 ZFYP08048 801 aaPredicted RBP12.82□□□□□ -0.36
ABCA3-205ENST00000567910 JAG1P78504 1218 aa12.82□□□□□ -0.36
ABCA3-205ENST00000567910 ZSCAN29Q8IWY8 852 aaPredicted RBP12.82□□□□□ -0.36
ABCA3-205ENST00000567910 RUFY2Q8WXA3 655 aa12.82□□□□□ -0.36
ABCA3-205ENST00000567910 NOL10Q9BSC4 688 aaKnown RBP12.82□□□□□ -0.36
ABCA3-205ENST00000567910 ZNF341Q9BYN7 854 aa12.82□□□□□ -0.36
ABCA3-205ENST00000567910 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.82□□□□□ -0.36
ABCA3-205ENST00000567910 PTPRFP10586 1907 aa12.82□□□□□ -0.36
ABCA3-205ENST00000567910 UNCXA6NJT0 531 aa12.81□□□□□ -0.36
ABCA3-205ENST00000567910 FOXN1O15353 648 aa12.81□□□□□ -0.36
ABCA3-205ENST00000567910 TBC1D12O60347 775 aa12.81□□□□□ -0.36
ABCA3-205ENST00000567910 CYP2D6P10635 497 aa12.81□□□□□ -0.36
ABCA3-205ENST00000567910 CHMLP26374 656 aa12.81□□□□□ -0.36
ABCA3-205ENST00000567910 PLCD1P51178 756 aa12.81□□□□□ -0.36
ABCA3-205ENST00000567910 NOL9Q5SY16 702 aaKnown RBP12.81□□□□□ -0.36
ABCA3-205ENST00000567910 DCAF15Q66K64 600 aa12.81□□□□□ -0.36
ABCA3-205ENST00000567910 CWC27Q6UX04 472 aaKnown RBP12.81□□□□□ -0.36
ABCA3-205ENST00000567910 APPBP2Q92624 585 aa12.81□□□□□ -0.36
ABCA3-205ENST00000567910 OPTNQ96CV9 577 aa12.81□□□□□ -0.36
ABCA3-205ENST00000567910 DCP1AQ9NPI6 582 aaPredicted RBP12.81□□□□□ -0.36
ABCA3-205ENST00000567910 SPDYE5A6NIY4 337 aa12.8□□□□□ -0.36
ABCA3-205ENST00000567910 NMIQ13287 307 aaPredicted RBP12.8□□□□□ -0.36
ABCA3-205ENST00000567910 C8orf34Q49A92 452 aa12.8□□□□□ -0.36
ABCA3-205ENST00000567910 ZMYM1Q5SVZ6 1142 aa12.8□□□□□ -0.36
ABCA3-205ENST00000567910 CCDC84Q86UT8 332 aaPredicted RBP12.8□□□□□ -0.36
ABCA3-205ENST00000567910 TICAM2Q86XR7 235 aa12.8□□□□□ -0.36
ABCA3-205ENST00000567910 CERS3Q8IU89 383 aa12.8□□□□□ -0.36
ABCA3-205ENST00000567910 SLC10A4Q96EP9 437 aa12.8□□□□□ -0.36
ABCA3-205ENST00000567910 MS4A4AQ96JQ5 239 aa12.8□□□□□ -0.36
ABCA3-205ENST00000567910 STRBPQ96SI9 672 aaKnown RBP12.8□□□□□ -0.36
ABCA3-205ENST00000567910 PTPN18Q99952 460 aa12.8□□□□□ -0.36
ABCA3-205ENST00000567910 EPB41L4AQ9HCS5 686 aaPredicted RBP12.8□□□□□ -0.36
ABCA3-205ENST00000567910 PI4KBQ9UBF8 816 aa12.8□□□□□ -0.36
ABCA3-205ENST00000567910 CYP2D7A0A087X1C5 515 aa12.79□□□□□ -0.36
ABCA3-205ENST00000567910 GPAA1O43292 621 aa12.79□□□□□ -0.36
ABCA3-205ENST00000567910 EIF5BO60841 1220 aaKnown RBP12.79□□□□□ -0.36
ABCA3-205ENST00000567910 ZBTB48P10074 688 aaPredicted RBP12.79□□□□□ -0.36
ABCA3-205ENST00000567910 USP5P45974 858 aa12.79□□□□□ -0.36
ABCA3-205ENST00000567910 GABPAQ06546 454 aa12.79□□□□□ -0.36
ABCA3-205ENST00000567910 CCDC129Q6ZRS4 1044 aa12.79□□□□□ -0.36
ABCA3-205ENST00000567910 HOOK2Q96ED9 719 aa12.79□□□□□ -0.36
ABCA3-205ENST00000567910 OTUD5Q96G74 571 aa12.79□□□□□ -0.36
ABCA3-205ENST00000567910 FAM227BQ96M60 508 aa12.79□□□□□ -0.36
ABCA3-205ENST00000567910 CRNKL1Q9BZJ0 848 aaKnown RBP12.79□□□□□ -0.36
ABCA3-205ENST00000567910 DHX36Q9H2U1 1008 aaKnown RBP12.79□□□□□ -0.36
ABCA3-205ENST00000567910 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.79□□□□□ -0.36
ABCA3-205ENST00000567910 TSKSQ9UJT2 592 aa12.79□□□□□ -0.36
ABCA3-205ENST00000567910 RAD50Q92878 1312 aa12.79□□□□□ -0.36
ABCA3-205ENST00000567910 A0A0D9SFI3 127 aa12.78□□□□□ -0.36
ABCA3-205ENST00000567910 GSG1L2A8MUP6 293 aa12.78□□□□□ -0.36
ABCA3-205ENST00000567910 IGF2BP3O00425 579 aaKnown RBP eCLIP12.78□□□□□ -0.36
ABCA3-205ENST00000567910 IRF6O14896 467 aa12.78□□□□□ -0.36
ABCA3-205ENST00000567910 TM4SF4P48230 202 aa12.78□□□□□ -0.36
ABCA3-205ENST00000567910 MAP2K1Q02750 393 aaPredicted RBP12.78□□□□□ -0.36
ABCA3-205ENST00000567910 MOGSQ13724 837 aa12.78□□□□□ -0.36
ABCA3-205ENST00000567910 SLC44A5Q8NCS7 719 aa12.78□□□□□ -0.36
ABCA3-205ENST00000567910 ESYT1Q9BSJ8 1104 aa12.78□□□□□ -0.36
ABCA3-205ENST00000567910 CSADQ9Y600 493 aa12.78□□□□□ -0.36
ABCA3-205ENST00000567910 HTTP42858 3142 aa12.77□□□□□ -0.37
ABCA3-205ENST00000567910 TESPA1A2RU30 521 aaPredicted RBP12.77□□□□□ -0.37
ABCA3-205ENST00000567910 HSPA8P11142 646 aaKnown RBP12.77□□□□□ -0.37
ABCA3-205ENST00000567910 PTPRAP18433 802 aa12.77□□□□□ -0.37
ABCA3-205ENST00000567910 SHMT1P34896 483 aa12.77□□□□□ -0.37
ABCA3-205ENST00000567910 MFAP1P55081 439 aaKnown RBP12.77□□□□□ -0.37
ABCA3-205ENST00000567910 TATDN1Q6P1N9 297 aa12.77□□□□□ -0.37
ABCA3-205ENST00000567910 KIAA1211Q6ZU35 1233 aa12.77□□□□□ -0.37
ABCA3-205ENST00000567910 ZNF589Q86UQ0 364 aaPredicted RBP12.77□□□□□ -0.37
ABCA3-205ENST00000567910 ERO1BQ86YB8 467 aa12.77□□□□□ -0.37
ABCA3-205ENST00000567910 SCYL3Q8IZE3 742 aa12.77□□□□□ -0.37
ABCA3-205ENST00000567910 BRI3BPQ8WY22 251 aa12.77□□□□□ -0.37
ABCA3-205ENST00000567910 AIDAQ96BJ3 306 aa12.77□□□□□ -0.37
ABCA3-205ENST00000567910 BACH2Q9BYV9 841 aa12.77□□□□□ -0.37
ABCA3-205ENST00000567910 EHD4Q9H223 541 aa12.77□□□□□ -0.37
ABCA3-205ENST00000567910 IL25Q9H293 177 aa12.77□□□□□ -0.37
ABCA3-205ENST00000567910 R3HDMLQ9H3Y0 253 aa12.77□□□□□ -0.37
ABCA3-205ENST00000567910 UPF2Q9HAU5 1272 aaKnown RBP12.77□□□□□ -0.37
ABCA3-205ENST00000567910 HELLSQ9NRZ9 838 aa12.77□□□□□ -0.37
ABCA3-205ENST00000567910 RNF186Q9NXI6 227 aa12.77□□□□□ -0.37
ABCA3-205ENST00000567910 MCM9Q9NXL9 1143 aa12.77□□□□□ -0.37
ABCA3-205ENST00000567910 HERC5Q9UII4 1024 aaKnown RBP12.77□□□□□ -0.37
ABCA3-205ENST00000567910 SLC4A4Q9Y6R1 1079 aa12.77□□□□□ -0.37
ABCA3-205ENST00000567910 SGSM2O43147 1006 aa12.76□□□□□ -0.37
ABCA3-205ENST00000567910 CTNND1O60716 968 aaKnown RBP12.76□□□□□ -0.37
ABCA3-205ENST00000567910 REC8O95072 547 aa12.76□□□□□ -0.37
ABCA3-205ENST00000567910 CAP2P40123 477 aa12.76□□□□□ -0.37
ABCA3-205ENST00000567910 PPIL2Q13356 520 aa12.76□□□□□ -0.37
ABCA3-205ENST00000567910 MCMDC2Q4G0Z9 681 aa12.76□□□□□ -0.37
ABCA3-205ENST00000567910 VPS53Q5VIR6 699 aa12.76□□□□□ -0.37
ABCA3-205ENST00000567910 CTR9Q6PD62 1173 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms