RNA–Protein interactions for RNA: ENST00000567710.5

NSMCE1-213, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 472 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-213ENST00000567710 DCP1AQ9NPI6 582 aaPredicted RBP12.95□□□□□ -0.34
NSMCE1-213ENST00000567710 HERC5Q9UII4 1024 aaKnown RBP12.95□□□□□ -0.34
NSMCE1-213ENST00000567710 SPDYE5A6NIY4 337 aa12.94□□□□□ -0.34
NSMCE1-213ENST00000567710 TRIM6-TRIM34B2RNG4 842 aa12.94□□□□□ -0.34
NSMCE1-213ENST00000567710 M0R2C6 588 aa12.94□□□□□ -0.34
NSMCE1-213ENST00000567710 METTL16Q86W50 562 aaKnown RBP12.94□□□□□ -0.34
NSMCE1-213ENST00000567710 ERO1BQ86YB8 467 aa12.94□□□□□ -0.34
NSMCE1-213ENST00000567710 OTUD5Q96G74 571 aa12.94□□□□□ -0.34
NSMCE1-213ENST00000567710 DNAJC18Q9H819 358 aa12.94□□□□□ -0.34
NSMCE1-213ENST00000567710 SIPA1L1O43166 1804 aa12.94□□□□□ -0.34
NSMCE1-213ENST00000567710 DDX60LQ5H9U9 1706 aaKnown RBP12.93□□□□□ -0.34
NSMCE1-213ENST00000567710 GPAA1O43292 621 aa12.93□□□□□ -0.34
NSMCE1-213ENST00000567710 CTNND1O60716 968 aaKnown RBP12.93□□□□□ -0.34
NSMCE1-213ENST00000567710 ZMYM1Q5SVZ6 1142 aa12.93□□□□□ -0.34
NSMCE1-213ENST00000567710 CENPQQ7L2Z9 268 aaPredicted RBP12.93□□□□□ -0.34
NSMCE1-213ENST00000567710 FOXP4Q8IVH2 680 aaPredicted RBP12.93□□□□□ -0.34
NSMCE1-213ENST00000567710 REM2Q8IYK8 340 aaPredicted RBP12.93□□□□□ -0.34
NSMCE1-213ENST00000567710 SCYL3Q8IZE3 742 aa12.93□□□□□ -0.34
NSMCE1-213ENST00000567710 CRACR2BQ8N4Y2 399 aaPredicted RBP12.93□□□□□ -0.34
NSMCE1-213ENST00000567710 RILPL2Q969X0 211 aa12.93□□□□□ -0.34
NSMCE1-213ENST00000567710 STRBPQ96SI9 672 aaKnown RBP12.93□□□□□ -0.34
NSMCE1-213ENST00000567710 SEC62Q99442 399 aaKnown RBP12.93□□□□□ -0.34
NSMCE1-213ENST00000567710 BEGAINQ9BUH8 593 aa12.93□□□□□ -0.34
NSMCE1-213ENST00000567710 ATP8A2Q9NTI2 1148 aa12.93□□□□□ -0.34
NSMCE1-213ENST00000567710 MCM9Q9NXL9 1143 aa12.93□□□□□ -0.34
NSMCE1-213ENST00000567710 SLC4A4Q9Y6R1 1079 aa12.93□□□□□ -0.34
NSMCE1-213ENST00000567710 NAV1Q8NEY1 1877 aa12.93□□□□□ -0.34
NSMCE1-213ENST00000567710 MANSC4A6NHS7 340 aaPredicted RBP12.92□□□□□ -0.34
NSMCE1-213ENST00000567710 FOXN1O15353 648 aa12.92□□□□□ -0.34
NSMCE1-213ENST00000567710 POLR3DP05423 398 aaPredicted RBP12.92□□□□□ -0.34
NSMCE1-213ENST00000567710 PLCD1P51178 756 aa12.92□□□□□ -0.34
NSMCE1-213ENST00000567710 PPATQ06203 517 aa12.92□□□□□ -0.34
NSMCE1-213ENST00000567710 SREBF2Q12772 1141 aa12.92□□□□□ -0.34
NSMCE1-213ENST00000567710 PPIL2Q13356 520 aa12.92□□□□□ -0.34
NSMCE1-213ENST00000567710 RRP1BQ14684 758 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-213ENST00000567710 TTC6Q86TZ1 520 aa12.92□□□□□ -0.34
NSMCE1-213ENST00000567710 TRIM34Q9BYJ4 488 aa12.92□□□□□ -0.34
NSMCE1-213ENST00000567710 EHD4Q9H223 541 aa12.92□□□□□ -0.34
NSMCE1-213ENST00000567710 SERPINB13Q9UIV8 391 aa12.92□□□□□ -0.34
NSMCE1-213ENST00000567710 MYH1P12882 1939 aa12.92□□□□□ -0.34
NSMCE1-213ENST00000567710 IRF6O14896 467 aa12.91□□□□□ -0.34
NSMCE1-213ENST00000567710 CYP2D6P10635 497 aa12.91□□□□□ -0.34
NSMCE1-213ENST00000567710 PTPRAP18433 802 aa12.91□□□□□ -0.34
NSMCE1-213ENST00000567710 CAP2P40123 477 aa12.91□□□□□ -0.34
NSMCE1-213ENST00000567710 TM4SF4P48230 202 aa12.91□□□□□ -0.34
NSMCE1-213ENST00000567710 EVX2Q03828 476 aa12.91□□□□□ -0.34
NSMCE1-213ENST00000567710 TTC22Q5TAA0 569 aa12.91□□□□□ -0.34
NSMCE1-213ENST00000567710 TICAM2Q86XR7 235 aa12.91□□□□□ -0.34
NSMCE1-213ENST00000567710 DDRGK1Q96HY6 314 aa12.91□□□□□ -0.34
NSMCE1-213ENST00000567710 CCDC136Q96JN2 1154 aa12.91□□□□□ -0.34
NSMCE1-213ENST00000567710 MS4A4AQ96JQ5 239 aa12.91□□□□□ -0.34
NSMCE1-213ENST00000567710 PICK1Q9NRD5 415 aa12.91□□□□□ -0.34
NSMCE1-213ENST00000567710 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.91□□□□□ -0.34
NSMCE1-213ENST00000567710 GSG1L2A8MUP6 293 aa12.9□□□□□ -0.34
NSMCE1-213ENST00000567710 CA12O43570 354 aa12.9□□□□□ -0.34
NSMCE1-213ENST00000567710 GSPT1P15170 499 aaKnown RBP12.9□□□□□ -0.34
NSMCE1-213ENST00000567710 GNAT2P19087 354 aa12.9□□□□□ -0.34
NSMCE1-213ENST00000567710 GTF2A2P52657 109 aa12.9□□□□□ -0.34
NSMCE1-213ENST00000567710 INHBEP58166 350 aa12.9□□□□□ -0.34
NSMCE1-213ENST00000567710 GABPAQ06546 454 aa12.9□□□□□ -0.34
NSMCE1-213ENST00000567710 FAM227BQ96M60 508 aa12.9□□□□□ -0.34
NSMCE1-213ENST00000567710 EPB41L4AQ9HCS5 686 aaPredicted RBP12.9□□□□□ -0.34
NSMCE1-213ENST00000567710 RNF186Q9NXI6 227 aa12.9□□□□□ -0.34
NSMCE1-213ENST00000567710 SAGE1Q9NXZ1 904 aa12.9□□□□□ -0.34
NSMCE1-213ENST00000567710 TSKSQ9UJT2 592 aa12.9□□□□□ -0.34
NSMCE1-213ENST00000567710 LAMB1P07942 1786 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 DOCK1Q14185 1865 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 CYP2D7A0A087X1C5 515 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 A0A0D9SFI3 127 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 TESPA1A2RU30 521 aaPredicted RBP12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 USP17L12C9JPN9 530 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 USP17L21D6R901 530 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 IGF2BP3O00425 579 aaKnown RBP eCLIP12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 TRPA1O75762 1119 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 GDF11O95390 407 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 HSPA8P11142 646 aaKnown RBP12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 SDSP20132 328 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 CTCFP49711 727 aaPredicted RBP12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 SNAPC2Q13487 334 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 TATDN1Q6P1N9 297 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 GIMAP6Q6P9H5 292 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 CTR9Q6PD62 1173 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 CCDC129Q6ZRS4 1044 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 CCDC84Q86UT8 332 aaPredicted RBP12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 IFNL1Q8IU54 200 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 AMOTL1Q8IY63 956 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 BRI3BPQ8WY22 251 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 HELLSQ9NRZ9 838 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 KCNH4Q9UQ05 1017 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 ZHX2Q9Y6X8 837 aa12.89□□□□□ -0.35
NSMCE1-213ENST00000567710 CCL15-CCL14A0A0B4J2E2 113 aa12.88□□□□□ -0.35
NSMCE1-213ENST00000567710 PATL2C9JE40 543 aaKnown RBP12.88□□□□□ -0.35
NSMCE1-213ENST00000567710 SMIM22K7EJ46 135 aa12.88□□□□□ -0.35
NSMCE1-213ENST00000567710 CETPP11597 493 aa12.88□□□□□ -0.35
NSMCE1-213ENST00000567710 SHMT1P34896 483 aa12.88□□□□□ -0.35
NSMCE1-213ENST00000567710 JAG1P78504 1218 aa12.88□□□□□ -0.35
NSMCE1-213ENST00000567710 NMIQ13287 307 aaPredicted RBP12.88□□□□□ -0.35
NSMCE1-213ENST00000567710 CCL15Q16663 113 aa12.88□□□□□ -0.35
NSMCE1-213ENST00000567710 SHROOM1Q2M3G4 852 aaPredicted RBP12.88□□□□□ -0.35
NSMCE1-213ENST00000567710 C12orf60Q5U649 245 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms